RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 ARHGAP27Q6ZUM4 889 aa28.47■■■□□ 2.15
VPS37C-202ENST00000535818 TNRC6CQ9HCJ0 1690 aaKnown RBP28.47■■■□□ 2.15
VPS37C-202ENST00000535818 RNF123Q5XPI4 1314 aa28.46■■■□□ 2.15
VPS37C-202ENST00000535818 STYK1Q6J9G0 422 aa28.46■■■□□ 2.15
VPS37C-202ENST00000535818 TRMT112Q9UI30 125 aaKnown RBP28.46■■■□□ 2.15
VPS37C-202ENST00000535818 CNKSR1Q969H4 720 aa28.45■■■□□ 2.14
VPS37C-202ENST00000535818 MYD88Q99836 296 aa28.45■■■□□ 2.14
VPS37C-202ENST00000535818 ISCA1Q9BUE6 129 aa28.45■■■□□ 2.14
VPS37C-202ENST00000535818 RIC1Q4ADV7 1423 aa28.44■■■□□ 2.14
VPS37C-202ENST00000535818 NPR1P16066 1061 aa28.44■■■□□ 2.14
VPS37C-202ENST00000535818 G2E3Q7L622 706 aa28.44■■■□□ 2.14
VPS37C-202ENST00000535818 ZNF428Q96B54 188 aa28.44■■■□□ 2.14
VPS37C-202ENST00000535818 CDCA7LQ96GN5 454 aa28.44■■■□□ 2.14
VPS37C-202ENST00000535818 GOLGB1Q14789 3259 aaKnown RBP28.44■■■□□ 2.14
VPS37C-202ENST00000535818 CACNA1SQ13698 1873 aa28.43■■■□□ 2.14
VPS37C-202ENST00000535818 KLRG2A4D1S0 409 aaPredicted RBP28.43■■■□□ 2.14
VPS37C-202ENST00000535818 FLIIQ13045 1269 aa28.43■■■□□ 2.14
VPS37C-202ENST00000535818 KSR2Q6VAB6 950 aa28.43■■■□□ 2.14
VPS37C-202ENST00000535818 MAP3K2Q9Y2U5 619 aa28.43■■■□□ 2.14
VPS37C-202ENST00000535818 SH3TC1Q8TE82 1336 aa28.43■■■□□ 2.14
VPS37C-202ENST00000535818 CACNA1FO60840 1977 aa28.42■■■□□ 2.14
VPS37C-202ENST00000535818 PI4KAP2A4QPH2 592 aa28.42■■■□□ 2.14
VPS37C-202ENST00000535818 HNRNPUQ00839 825 aaKnown RBP eCLIP28.42■■■□□ 2.14
VPS37C-202ENST00000535818 PI4KAP1Q8N8J0 262 aa28.42■■■□□ 2.14
VPS37C-202ENST00000535818 FKBP5Q13451 457 aaPredicted RBP28.41■■■□□ 2.14
VPS37C-202ENST00000535818 RPGRQ92834 1020 aaKnown RBP28.41■■■□□ 2.14
VPS37C-202ENST00000535818 NLRP3Q96P20 1036 aa28.41■■■□□ 2.14
VPS37C-202ENST00000535818 METTL22Q9BUU2 404 aaPredicted RBP28.41■■■□□ 2.14
VPS37C-202ENST00000535818 ZNF219Q9P2Y4 722 aaPredicted RBP28.41■■■□□ 2.14
VPS37C-202ENST00000535818 PRPF40BQ6NWY9 871 aaKnown RBP28.4■■■□□ 2.14
VPS37C-202ENST00000535818 ADCY9O60503 1353 aa28.39■■■□□ 2.14
VPS37C-202ENST00000535818 UTRNP46939 3433 aa28.39■■■□□ 2.14
VPS37C-202ENST00000535818 NEXNQ0ZGT2 675 aa28.39■■■□□ 2.14
VPS37C-202ENST00000535818 TRIM28Q13263 835 aaKnown RBP28.39■■■□□ 2.14
VPS37C-202ENST00000535818 CRY2Q49AN0 593 aa28.38■■■□□ 2.13
VPS37C-202ENST00000535818 SLC10A5Q5PT55 438 aa28.38■■■□□ 2.13
VPS37C-202ENST00000535818 C21orf2O43822 256 aa28.37■■■□□ 2.13
VPS37C-202ENST00000535818 HCLS1P14317 486 aaPredicted RBP28.37■■■□□ 2.13
VPS37C-202ENST00000535818 ALDH1B1P30837 517 aa28.37■■■□□ 2.13
VPS37C-202ENST00000535818 SYNE4Q8N205 404 aa28.37■■■□□ 2.13
VPS37C-202ENST00000535818 CCDC191Q8NCU4 936 aa28.37■■■□□ 2.13
VPS37C-202ENST00000535818 FAM89AQ96GI7 184 aa28.36■■■□□ 2.13
VPS37C-202ENST00000535818 CWC25Q9NXE8 425 aaPredicted RBP28.36■■■□□ 2.13
VPS37C-202ENST00000535818 SLX4Q8IY92 1834 aa28.36■■■□□ 2.13
VPS37C-202ENST00000535818 RTL5Q5HYW3 569 aaPredicted RBP28.35■■■□□ 2.13
VPS37C-202ENST00000535818 C3orf67Q6ZVT6 689 aa28.35■■■□□ 2.13
VPS37C-202ENST00000535818 TRMT2AQ8IZ69 625 aaKnown RBP28.35■■■□□ 2.13
VPS37C-202ENST00000535818 RBM17Q96I25 401 aaKnown RBP28.35■■■□□ 2.13
VPS37C-202ENST00000535818 SOGA3Q5TF21 947 aa28.33■■■□□ 2.13
VPS37C-202ENST00000535818 DNAAF4Q8WXU2 420 aa28.33■■■□□ 2.13
VPS37C-202ENST00000535818 LAMB2P55268 1798 aa28.32■■■□□ 2.12
VPS37C-202ENST00000535818 ZBTB38Q8NAP3 1195 aaPredicted RBP28.32■■■□□ 2.12
VPS37C-202ENST00000535818 DDX60Q8IY21 1712 aaKnown RBP28.32■■■□□ 2.12
VPS37C-202ENST00000535818 IRS4O14654 1257 aaPredicted RBP28.31■■■□□ 2.12
VPS37C-202ENST00000535818 HOXA10P31260 410 aaPredicted RBP28.31■■■□□ 2.12
VPS37C-202ENST00000535818 RASSF7Q02833 373 aa28.31■■■□□ 2.12
VPS37C-202ENST00000535818 PCCAP05165 728 aaPredicted RBP28.3■■■□□ 2.12
VPS37C-202ENST00000535818 IGKV5-2P06315 115 aa28.3■■■□□ 2.12
VPS37C-202ENST00000535818 HSP90B1P14625 803 aaKnown RBP28.3■■■□□ 2.12
VPS37C-202ENST00000535818 CWF19L2Q2TBE0 894 aaKnown RBP28.3■■■□□ 2.12
VPS37C-202ENST00000535818 CRAMP1Q96RY5 1269 aa28.3■■■□□ 2.12
VPS37C-202ENST00000535818 CCDC93Q567U6 631 aa28.29■■■□□ 2.12
VPS37C-202ENST00000535818 C9orf131Q5VYM1 1079 aa28.29■■■□□ 2.12
VPS37C-202ENST00000535818 NEURL1BA8MQ27 555 aa28.28■■■□□ 2.12
VPS37C-202ENST00000535818 RNF181Q9P0P0 153 aa28.28■■■□□ 2.12
VPS37C-202ENST00000535818 F6X3S4 739 aa28.27■■■□□ 2.12
VPS37C-202ENST00000535818 NFKBIEO00221 500 aa28.27■■■□□ 2.12
VPS37C-202ENST00000535818 CT47B1P0C2W7 299 aaPredicted RBP28.27■■■□□ 2.12
VPS37C-202ENST00000535818 DDX46Q7L014 1031 aaKnown RBP28.27■■■□□ 2.12
VPS37C-202ENST00000535818 MRPL50Q8N5N7 158 aaKnown RBP28.27■■■□□ 2.12
VPS37C-202ENST00000535818 ZNF784Q8NCA9 323 aaPredicted RBP28.27■■■□□ 2.12
VPS37C-202ENST00000535818 SSH1Q8WYL5 1049 aa28.27■■■□□ 2.12
VPS37C-202ENST00000535818 ALDH1L2Q3SY69 923 aa28.26■■■□□ 2.11
VPS37C-202ENST00000535818 C7orf43Q8WVR3 580 aa28.26■■■□□ 2.11
VPS37C-202ENST00000535818 JARID2Q92833 1246 aaPredicted RBP28.26■■■□□ 2.11
VPS37C-202ENST00000535818 BCL2L13Q9BXK5 485 aa28.26■■■□□ 2.11
VPS37C-202ENST00000535818 FER1L6Q2WGJ9 1857 aa28.25■■■□□ 2.11
VPS37C-202ENST00000535818 ABCC4O15439 1325 aa28.25■■■□□ 2.11
VPS37C-202ENST00000535818 PPEF1O14829 653 aaPredicted RBP28.25■■■□□ 2.11
VPS37C-202ENST00000535818 LINS1Q8NG48 757 aa28.25■■■□□ 2.11
VPS37C-202ENST00000535818 TAOK3Q9H2K8 898 aa28.25■■■□□ 2.11
VPS37C-202ENST00000535818 SMC4Q9NTJ3 1288 aa28.25■■■□□ 2.11
VPS37C-202ENST00000535818 LMNB1P20700 586 aa28.24■■■□□ 2.11
VPS37C-202ENST00000535818 SBF1O95248 1867 aa28.23■■■□□ 2.11
VPS37C-202ENST00000535818 CDHR2Q9BYE9 1310 aa28.23■■■□□ 2.11
VPS37C-202ENST00000535818 SF3B3Q15393 1217 aaKnown RBP28.23■■■□□ 2.11
VPS37C-202ENST00000535818 OLFM4Q6UX06 510 aa28.23■■■□□ 2.11
VPS37C-202ENST00000535818 TMX4Q9H1E5 349 aaPredicted RBP28.23■■■□□ 2.11
VPS37C-202ENST00000535818 ZBED9Q6R2W3 1325 aa28.22■■■□□ 2.11
VPS37C-202ENST00000535818 PDE8AO60658 829 aa28.22■■■□□ 2.11
VPS37C-202ENST00000535818 GCKRQ14397 625 aa28.22■■■□□ 2.11
VPS37C-202ENST00000535818 SLC4A10Q6U841 1118 aa28.22■■■□□ 2.11
VPS37C-202ENST00000535818 RTKN2Q8IZC4 609 aa28.22■■■□□ 2.11
VPS37C-202ENST00000535818 PTPRCP08575 1304 aa28.21■■■□□ 2.11
VPS37C-202ENST00000535818 LTBP3Q9NS15 1303 aa28.21■■■□□ 2.11
VPS37C-202ENST00000535818 GRAPQ13588 217 aa28.21■■■□□ 2.11
VPS37C-202ENST00000535818 CC2D2BQ6DHV5 1058 aa28.21■■■□□ 2.11
VPS37C-202ENST00000535818 GRAPLQ8TC17 118 aaPredicted RBP28.21■■■□□ 2.11
VPS37C-202ENST00000535818 BEND3Q5T5X7 828 aa28.2■■■□□ 2.1
VPS37C-202ENST00000535818 UBE3BQ7Z3V4 1068 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms