RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 OLFM4Q6UX06 510 aa21.26■□□□□ 0.99
ATL3-202ENST00000535789 C7orf43Q8WVR3 580 aa21.26■□□□□ 0.99
ATL3-202ENST00000535789 NYXQ9GZU5 481 aa21.26■□□□□ 0.99
ATL3-202ENST00000535789 PHAXQ9H814 394 aaKnown RBP21.26■□□□□ 0.99
ATL3-202ENST00000535789 SALL2Q9Y467 1007 aaPredicted RBP21.26■□□□□ 0.99
ATL3-202ENST00000535789 IL16Q14005 1332 aa21.26■□□□□ 0.99
ATL3-202ENST00000535789 NPR1P16066 1061 aa21.25■□□□□ 0.99
ATL3-202ENST00000535789 NLRP10Q86W26 655 aa21.25■□□□□ 0.99
ATL3-202ENST00000535789 ZNF428Q96B54 188 aa21.25■□□□□ 0.99
ATL3-202ENST00000535789 SPINK5Q9NQ38 1064 aaPredicted RBP21.25■□□□□ 0.99
ATL3-202ENST00000535789 RNF181Q9P0P0 153 aa21.25■□□□□ 0.99
ATL3-202ENST00000535789 FANCIQ9NVI1 1328 aa21.25■□□□□ 0.99
ATL3-202ENST00000535789 SYNE4Q8N205 404 aa21.24■□□□□ 0.99
ATL3-202ENST00000535789 CNKSR1Q969H4 720 aa21.24■□□□□ 0.99
ATL3-202ENST00000535789 TCIRG1Q13488 830 aa21.23■□□□□ 0.99
ATL3-202ENST00000535789 PARP10Q53GL7 1025 aa21.23■□□□□ 0.99
ATL3-202ENST00000535789 PLBD2Q8NHP8 589 aa21.23■□□□□ 0.99
ATL3-202ENST00000535789 GPBP1L1Q9HC44 474 aaPredicted RBP21.23■□□□□ 0.99
ATL3-202ENST00000535789 COL4A5P29400 1685 aa21.23■□□□□ 0.99
ATL3-202ENST00000535789 SPEF2Q9C093 1822 aa21.22■□□□□ 0.99
ATL3-202ENST00000535789 WDR90Q96KV7 1748 aa21.22■□□□□ 0.99
ATL3-202ENST00000535789 ISCA1Q9BUE6 129 aa21.22■□□□□ 0.99
ATL3-202ENST00000535789 HYPKQ9NX55 129 aa21.22■□□□□ 0.99
ATL3-202ENST00000535789 KIF3CO14782 793 aa21.21■□□□□ 0.99
ATL3-202ENST00000535789 GTF2E1P29083 439 aaPredicted RBP21.21■□□□□ 0.99
ATL3-202ENST00000535789 ANKRD13DQ6ZTN6 518 aa21.21■□□□□ 0.99
ATL3-202ENST00000535789 ZNF521Q96K83 1311 aa21.21■□□□□ 0.99
ATL3-202ENST00000535789 LTBP3Q9NS15 1303 aa21.21■□□□□ 0.99
ATL3-202ENST00000535789 LTBP1Q14766 1721 aa21.21■□□□□ 0.99
ATL3-202ENST00000535789 LMNB1P20700 586 aa21.2■□□□□ 0.98
ATL3-202ENST00000535789 HSP90AB3PQ58FF7 597 aa21.2■□□□□ 0.98
ATL3-202ENST00000535789 PPP1R42Q7Z4L9 355 aa21.2■□□□□ 0.98
ATL3-202ENST00000535789 UTP14AQ9BVJ6 771 aaKnown RBP21.2■□□□□ 0.98
ATL3-202ENST00000535789 CEP350Q5VT06 3117 aa21.2■□□□□ 0.98
ATL3-202ENST00000535789 ATP5J2-PTCD1G3V325 749 aa21.19■□□□□ 0.98
ATL3-202ENST00000535789 TCERG1O14776 1098 aaKnown RBP21.19■□□□□ 0.98
ATL3-202ENST00000535789 MIER1Q8N108 512 aa21.19■□□□□ 0.98
ATL3-202ENST00000535789 NMRK2Q9NPI5 230 aa21.19■□□□□ 0.98
ATL3-202ENST00000535789 HOXA10P31260 410 aaPredicted RBP21.18■□□□□ 0.98
ATL3-202ENST00000535789 C1QTNF8P60827 252 aa21.18■□□□□ 0.98
ATL3-202ENST00000535789 TWISTNBQ3B726 338 aaPredicted RBP21.18■□□□□ 0.98
ATL3-202ENST00000535789 SLC10A5Q5PT55 438 aa21.18■□□□□ 0.98
ATL3-202ENST00000535789 WDR63Q8IWG1 891 aa21.18■□□□□ 0.98
ATL3-202ENST00000535789 RNF123Q5XPI4 1314 aa21.18■□□□□ 0.98
ATL3-202ENST00000535789 DUOX1Q9NRD9 1551 aa21.18■□□□□ 0.98
ATL3-202ENST00000535789 TAOK3Q9H2K8 898 aa21.17■□□□□ 0.98
ATL3-202ENST00000535789 ZC3H4Q9UPT8 1303 aaKnown RBP21.16■□□□□ 0.98
ATL3-202ENST00000535789 HCLS1P14317 486 aaPredicted RBP21.16■□□□□ 0.98
ATL3-202ENST00000535789 CCDC30Q5VVM6 783 aa21.16■□□□□ 0.98
ATL3-202ENST00000535789 G2E3Q7L622 706 aa21.16■□□□□ 0.98
ATL3-202ENST00000535789 ABCC4O15439 1325 aa21.15■□□□□ 0.98
ATL3-202ENST00000535789 CCDC93Q567U6 631 aa21.15■□□□□ 0.98
ATL3-202ENST00000535789 TRMT112Q9UI30 125 aaKnown RBP21.15■□□□□ 0.98
ATL3-202ENST00000535789 SH3TC1Q8TE82 1336 aa21.14■□□□□ 0.97
ATL3-202ENST00000535789 EXOSC9Q06265 439 aaKnown RBP21.14■□□□□ 0.97
ATL3-202ENST00000535789 RPGRQ92834 1020 aaKnown RBP21.14■□□□□ 0.97
ATL3-202ENST00000535789 ALDH1B1P30837 517 aa21.13■□□□□ 0.97
ATL3-202ENST00000535789 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
ATL3-202ENST00000535789 SOGA3Q5TF21 947 aa21.13■□□□□ 0.97
ATL3-202ENST00000535789 FAM89AQ96GI7 184 aa21.13■□□□□ 0.97
ATL3-202ENST00000535789 CRAMP1Q96RY5 1269 aa21.13■□□□□ 0.97
ATL3-202ENST00000535789 SCN4AP35499 1836 aa21.13■□□□□ 0.97
ATL3-202ENST00000535789 VAMP4O75379 141 aa21.12■□□□□ 0.97
ATL3-202ENST00000535789 TRIM28Q13263 835 aaKnown RBP21.12■□□□□ 0.97
ATL3-202ENST00000535789 RIC3Q7Z5B4 369 aa21.12■□□□□ 0.97
ATL3-202ENST00000535789 NLRP3Q96P20 1036 aa21.12■□□□□ 0.97
ATL3-202ENST00000535789 MYD88Q99836 296 aa21.12■□□□□ 0.97
ATL3-202ENST00000535789 A0A1B0GUL6 1792 aa21.12■□□□□ 0.97
ATL3-202ENST00000535789 FKBP4Q02790 459 aaKnown RBP eCLIP21.11■□□□□ 0.97
ATL3-202ENST00000535789 PPEF1O14829 653 aaPredicted RBP21.1■□□□□ 0.97
ATL3-202ENST00000535789 RTL5Q5HYW3 569 aaPredicted RBP21.1■□□□□ 0.97
ATL3-202ENST00000535789 RBM17Q96I25 401 aaKnown RBP21.1■□□□□ 0.97
ATL3-202ENST00000535789 METTL22Q9BUU2 404 aaPredicted RBP21.1■□□□□ 0.97
ATL3-202ENST00000535789 ZNF277Q9NRM2 450 aaPredicted RBP21.1■□□□□ 0.97
ATL3-202ENST00000535789 MAP3K2Q9Y2U5 619 aa21.1■□□□□ 0.97
ATL3-202ENST00000535789 IGKV5-2P06315 115 aa21.09■□□□□ 0.97
ATL3-202ENST00000535789 ADAMTSL1Q8N6G6 1762 aa21.08■□□□□ 0.97
ATL3-202ENST00000535789 PI4KAP2A4QPH2 592 aa21.08■□□□□ 0.97
ATL3-202ENST00000535789 GLTPD2A6NH11 291 aa21.08■□□□□ 0.97
ATL3-202ENST00000535789 PI4KAP1Q8N8J0 262 aa21.08■□□□□ 0.97
ATL3-202ENST00000535789 KDM2BQ8NHM5 1336 aa21.07■□□□□ 0.96
ATL3-202ENST00000535789 POTECB2RU33 542 aa21.07■□□□□ 0.96
ATL3-202ENST00000535789 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
ATL3-202ENST00000535789 SLC4A2P04920 1241 aa21.07■□□□□ 0.96
ATL3-202ENST00000535789 KSR2Q6VAB6 950 aa21.07■□□□□ 0.96
ATL3-202ENST00000535789 JARID2Q92833 1246 aaPredicted RBP21.07■□□□□ 0.96
ATL3-202ENST00000535789 STK31Q9BXU1 1019 aa21.07■□□□□ 0.96
ATL3-202ENST00000535789 RRAGCQ9HB90 399 aa21.07■□□□□ 0.96
ATL3-202ENST00000535789 ZNF541Q9H0D2 1346 aa21.06■□□□□ 0.96
ATL3-202ENST00000535789 FLIIQ13045 1269 aa21.06■□□□□ 0.96
ATL3-202ENST00000535789 RTKN2Q8IZC4 609 aa21.06■□□□□ 0.96
ATL3-202ENST00000535789 PSMD1Q99460 953 aa21.06■□□□□ 0.96
ATL3-202ENST00000535789 IRS4O14654 1257 aaPredicted RBP21.05■□□□□ 0.96
ATL3-202ENST00000535789 IARSP41252 1262 aaKnown RBP21.05■□□□□ 0.96
ATL3-202ENST00000535789 SF3B3Q15393 1217 aaKnown RBP21.05■□□□□ 0.96
ATL3-202ENST00000535789 ZBTB38Q8NAP3 1195 aaPredicted RBP21.05■□□□□ 0.96
ATL3-202ENST00000535789 CCDC191Q8NCU4 936 aa21.05■□□□□ 0.96
ATL3-202ENST00000535789 ATP6V0A2Q9Y487 856 aa21.05■□□□□ 0.96
ATL3-202ENST00000535789 ZNF646O15015 1829 aaPredicted RBP21.05■□□□□ 0.96
ATL3-202ENST00000535789 PSME4Q14997 1843 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms