RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 TTC22Q5TAA0 569 aa25.91■■□□□ 1.74
PDXDC1-205ENST00000535621 CCDC191Q8NCU4 936 aa25.91■■□□□ 1.74
PDXDC1-205ENST00000535621 C4BP0C0L5 1744 aa25.91■■□□□ 1.74
PDXDC1-205ENST00000535621 SALL3Q9BXA9 1300 aa25.91■■□□□ 1.74
PDXDC1-205ENST00000535621 HSP90AB4PQ58FF6 505 aa25.9■■□□□ 1.74
PDXDC1-205ENST00000535621 ILDR1Q86SU0 546 aaPredicted RBP25.9■■□□□ 1.74
PDXDC1-205ENST00000535621 H7C1W4 665 aa25.9■■□□□ 1.74
PDXDC1-205ENST00000535621 TCIRG1Q13488 830 aa25.9■■□□□ 1.74
PDXDC1-205ENST00000535621 RTL5Q5HYW3 569 aaPredicted RBP25.9■■□□□ 1.74
PDXDC1-205ENST00000535621 ISCA1Q9BUE6 129 aa25.9■■□□□ 1.74
PDXDC1-205ENST00000535621 OSBPL3Q9H4L5 887 aa25.9■■□□□ 1.74
PDXDC1-205ENST00000535621 RHPN1Q8TCX5 695 aa25.89■■□□□ 1.74
PDXDC1-205ENST00000535621 TNS1Q9HBL0 1735 aaKnown RBP25.89■■□□□ 1.73
PDXDC1-205ENST00000535621 CNTNAP4Q9C0A0 1308 aa25.89■■□□□ 1.73
PDXDC1-205ENST00000535621 GPTP24298 496 aa25.88■■□□□ 1.73
PDXDC1-205ENST00000535621 RABL6Q3YEC7 729 aaPredicted RBP25.88■■□□□ 1.73
PDXDC1-205ENST00000535621 KIF1BPQ96EK5 621 aa25.88■■□□□ 1.73
PDXDC1-205ENST00000535621 PDE1AP54750 535 aa25.87■■□□□ 1.73
PDXDC1-205ENST00000535621 GIGYF2Q6Y7W6 1299 aaKnown RBP25.87■■□□□ 1.73
PDXDC1-205ENST00000535621 TRIM28Q13263 835 aaKnown RBP25.87■■□□□ 1.73
PDXDC1-205ENST00000535621 PROM2Q8N271 834 aa25.87■■□□□ 1.73
PDXDC1-205ENST00000535621 IL1RAPL2Q9NP60 686 aa25.87■■□□□ 1.73
PDXDC1-205ENST00000535621 PA2G4Q9UQ80 394 aaKnown RBP25.87■■□□□ 1.73
PDXDC1-205ENST00000535621 BCORQ6W2J9 1755 aa25.86■■□□□ 1.73
PDXDC1-205ENST00000535621 GNPATO15228 680 aa25.86■■□□□ 1.73
PDXDC1-205ENST00000535621 CAMTA2O94983 1202 aa25.85■■□□□ 1.73
PDXDC1-205ENST00000535621 MX1P20591 662 aa25.84■■□□□ 1.73
PDXDC1-205ENST00000535621 APBA3O96018 575 aa25.83■■□□□ 1.73
PDXDC1-205ENST00000535621 IPO9Q96P70 1041 aaKnown RBP25.83■■□□□ 1.73
PDXDC1-205ENST00000535621 C4AP0C0L4 1744 aa25.83■■□□□ 1.73
PDXDC1-205ENST00000535621 OS9Q13438 667 aaPredicted RBP25.83■■□□□ 1.73
PDXDC1-205ENST00000535621 RC3H1Q5TC82 1133 aaKnown RBP25.83■■□□□ 1.73
PDXDC1-205ENST00000535621 STAP2Q9UGK3 403 aa25.83■■□□□ 1.73
PDXDC1-205ENST00000535621 FOXO4P98177 505 aa25.82■■□□□ 1.72
PDXDC1-205ENST00000535621 ERC1Q8IUD2 1116 aa25.82■■□□□ 1.72
PDXDC1-205ENST00000535621 UBR3Q6ZT12 1888 aa25.82■■□□□ 1.72
PDXDC1-205ENST00000535621 UBN2Q6ZU65 1347 aa25.82■■□□□ 1.72
PDXDC1-205ENST00000535621 ERVV-1B6SEH8 477 aa25.81■■□□□ 1.72
PDXDC1-205ENST00000535621 TXNRD1Q16881 649 aa25.81■■□□□ 1.72
PDXDC1-205ENST00000535621 SYNE4Q8N205 404 aa25.81■■□□□ 1.72
PDXDC1-205ENST00000535621 UPF2Q9HAU5 1272 aaKnown RBP25.81■■□□□ 1.72
PDXDC1-205ENST00000535621 RPS6KA4O75676 772 aa25.81■■□□□ 1.72
PDXDC1-205ENST00000535621 RFX5P48382 616 aaPredicted RBP25.81■■□□□ 1.72
PDXDC1-205ENST00000535621 HSP90AB3PQ58FF7 597 aa25.81■■□□□ 1.72
PDXDC1-205ENST00000535621 PHF14O94880 888 aa25.8■■□□□ 1.72
PDXDC1-205ENST00000535621 TBC1D9Q6ZT07 1266 aa25.8■■□□□ 1.72
PDXDC1-205ENST00000535621 SRP68Q9UHB9 627 aaKnown RBP25.8■■□□□ 1.72
PDXDC1-205ENST00000535621 SCN7AQ01118 1682 aa25.8■■□□□ 1.72
PDXDC1-205ENST00000535621 SDSP20132 328 aa25.8■■□□□ 1.72
PDXDC1-205ENST00000535621 TSHZ3Q63HK5 1081 aa25.8■■□□□ 1.72
PDXDC1-205ENST00000535621 NLRP10Q86W26 655 aa25.8■■□□□ 1.72
PDXDC1-205ENST00000535621 COPRSQ9NQ92 184 aa25.8■■□□□ 1.72
PDXDC1-205ENST00000535621 MSH5O43196 834 aa25.79■■□□□ 1.72
PDXDC1-205ENST00000535621 CDC45O75419 566 aa25.79■■□□□ 1.72
PDXDC1-205ENST00000535621 LMBR1LQ6UX01 489 aa25.79■■□□□ 1.72
PDXDC1-205ENST00000535621 KLHDC4Q8TBB5 520 aa25.79■■□□□ 1.72
PDXDC1-205ENST00000535621 G3BP1Q13283 466 aaKnown RBP eCLIP25.78■■□□□ 1.721e-7■■□□□ 13.3
PDXDC1-205ENST00000535621 NUTM1Q86Y26 1132 aa25.78■■□□□ 1.72
PDXDC1-205ENST00000535621 FAM89AQ96GI7 184 aa25.78■■□□□ 1.72
PDXDC1-205ENST00000535621 TUBGCP6Q96RT7 1819 aa25.78■■□□□ 1.72
PDXDC1-205ENST00000535621 AOX1Q06278 1338 aa25.78■■□□□ 1.72
PDXDC1-205ENST00000535621 SASH1O94885 1247 aa25.78■■□□□ 1.72
PDXDC1-205ENST00000535621 MFAP1P55081 439 aaKnown RBP25.78■■□□□ 1.72
PDXDC1-205ENST00000535621 ZNF34Q8IZ26 560 aa25.78■■□□□ 1.72
PDXDC1-205ENST00000535621 AK7Q96M32 723 aa25.78■■□□□ 1.72
PDXDC1-205ENST00000535621 TBC1D32Q96NH3 1257 aa25.78■■□□□ 1.72
PDXDC1-205ENST00000535621 RTCBQ9Y3I0 505 aaKnown RBP25.78■■□□□ 1.72
PDXDC1-205ENST00000535621 PCCAP05165 728 aaPredicted RBP25.77■■□□□ 1.72
PDXDC1-205ENST00000535621 PTPN12Q05209 780 aaKnown RBP25.77■■□□□ 1.72
PDXDC1-205ENST00000535621 SLC27A3Q5K4L6 730 aa25.77■■□□□ 1.72
PDXDC1-205ENST00000535621 SIL1Q9H173 461 aa25.77■■□□□ 1.72
PDXDC1-205ENST00000535621 FAM177BA6PVY3 158 aa25.76■■□□□ 1.72
PDXDC1-205ENST00000535621 CLASRPQ8N2M8 674 aaKnown RBP25.76■■□□□ 1.72
PDXDC1-205ENST00000535621 ZBTB38Q8NAP3 1195 aaPredicted RBP25.76■■□□□ 1.72
PDXDC1-205ENST00000535621 BCL2L12Q9HB09 334 aa25.76■■□□□ 1.72
PDXDC1-205ENST00000535621 ARHGEF1Q92888 912 aaKnown RBP25.76■■□□□ 1.71
PDXDC1-205ENST00000535621 USPL1Q5W0Q7 1092 aa25.75■■□□□ 1.71
PDXDC1-205ENST00000535621 PLSCR1O15162 318 aa25.75■■□□□ 1.71
PDXDC1-205ENST00000535621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.74■■□□□ 1.71
PDXDC1-205ENST00000535621 USP42Q9H9J4 1324 aaKnown RBP25.73■■□□□ 1.71
PDXDC1-205ENST00000535621 SUSD4Q5VX71 490 aa25.73■■□□□ 1.71
PDXDC1-205ENST00000535621 PLA2G12BQ9BX93 195 aa25.73■■□□□ 1.71
PDXDC1-205ENST00000535621 NIP7Q9Y221 180 aaKnown RBP eCLIP25.73■■□□□ 1.71
PDXDC1-205ENST00000535621 PI4K2BQ8TCG2 481 aa25.72■■□□□ 1.71
PDXDC1-205ENST00000535621 DDRGK1Q96HY6 314 aa25.72■■□□□ 1.71
PDXDC1-205ENST00000535621 NARFQ9UHQ1 456 aa25.72■■□□□ 1.71
PDXDC1-205ENST00000535621 ZNF827Q17R98 1081 aa25.71■■□□□ 1.71
PDXDC1-205ENST00000535621 BICDL1Q6ZP65 573 aa25.71■■□□□ 1.71
PDXDC1-205ENST00000535621 TRMT112Q9UI30 125 aaKnown RBP25.71■■□□□ 1.71
PDXDC1-205ENST00000535621 CHMP3Q9Y3E7 222 aa25.71■■□□□ 1.71
PDXDC1-205ENST00000535621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.71■■□□□ 1.71
PDXDC1-205ENST00000535621 C22orf23Q9BZE7 217 aa25.71■■□□□ 1.71
PDXDC1-205ENST00000535621 CDHR2Q9BYE9 1310 aa25.71■■□□□ 1.71
PDXDC1-205ENST00000535621 MYH3P11055 1940 aa25.7■■□□□ 1.7
PDXDC1-205ENST00000535621 TTC41PQ6P2S7 1318 aa25.7■■□□□ 1.7
PDXDC1-205ENST00000535621 TRAPPC3LQ5T215 181 aa25.7■■□□□ 1.7
PDXDC1-205ENST00000535621 TBC1D9BQ66K14 1250 aa25.7■■□□□ 1.7
PDXDC1-205ENST00000535621 EAF2Q96CJ1 260 aaPredicted RBP25.7■■□□□ 1.7
PDXDC1-205ENST00000535621 CCDC85AQ96PX6 553 aaPredicted RBP25.7■■□□□ 1.7
PDXDC1-205ENST00000535621 RGPD3A6NKT7 1758 aaPredicted RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms