RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 ZNF34Q8IZ26 560 aa12.24□□□□□ -0.45
CDCA3-204ENST00000535406 RNF181Q9P0P0 153 aa12.24□□□□□ -0.45
CDCA3-204ENST00000535406 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
CDCA3-204ENST00000535406 SLX4Q8IY92 1834 aa12.24□□□□□ -0.45
CDCA3-204ENST00000535406 TIAM2Q8IVF5 1701 aa12.23□□□□□ -0.45
CDCA3-204ENST00000535406 KLRG2A4D1S0 409 aaPredicted RBP12.23□□□□□ -0.45
CDCA3-204ENST00000535406 NPR1P16066 1061 aa12.23□□□□□ -0.45
CDCA3-204ENST00000535406 PARP10Q53GL7 1025 aa12.23□□□□□ -0.45
CDCA3-204ENST00000535406 HSP90AB3PQ58FF7 597 aa12.23□□□□□ -0.45
CDCA3-204ENST00000535406 PRPF40BQ6NWY9 871 aaKnown RBP12.23□□□□□ -0.45
CDCA3-204ENST00000535406 PPP1R42Q7Z4L9 355 aa12.23□□□□□ -0.45
CDCA3-204ENST00000535406 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
CDCA3-204ENST00000535406 FER1L6Q2WGJ9 1857 aa12.22□□□□□ -0.45
CDCA3-204ENST00000535406 C21orf2O43822 256 aa12.22□□□□□ -0.45
CDCA3-204ENST00000535406 NTSR2O95665 410 aa12.22□□□□□ -0.45
CDCA3-204ENST00000535406 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
CDCA3-204ENST00000535406 SUSD4Q5VX71 490 aa12.22□□□□□ -0.45
CDCA3-204ENST00000535406 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
CDCA3-204ENST00000535406 NFKBIEO00221 500 aa12.21□□□□□ -0.45
CDCA3-204ENST00000535406 ELL2O00472 640 aaPredicted RBP12.21□□□□□ -0.45
CDCA3-204ENST00000535406 LMNB1P20700 586 aa12.21□□□□□ -0.45
CDCA3-204ENST00000535406 C1QTNF8P60827 252 aa12.21□□□□□ -0.45
CDCA3-204ENST00000535406 SOGA3Q5TF21 947 aa12.21□□□□□ -0.45
CDCA3-204ENST00000535406 FAM9BQ8IZU0 186 aa12.21□□□□□ -0.45
CDCA3-204ENST00000535406 IL16Q14005 1332 aa12.2□□□□□ -0.46
CDCA3-204ENST00000535406 RNF123Q5XPI4 1314 aa12.2□□□□□ -0.46
CDCA3-204ENST00000535406 ZC3H4Q9UPT8 1303 aaKnown RBP12.2□□□□□ -0.46
CDCA3-204ENST00000535406 CCDC88AQ3V6T2 1871 aa12.2□□□□□ -0.46
CDCA3-204ENST00000535406 TCIRG1Q13488 830 aa12.2□□□□□ -0.46
CDCA3-204ENST00000535406 CRY2Q49AN0 593 aa12.2□□□□□ -0.46
CDCA3-204ENST00000535406 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
CDCA3-204ENST00000535406 PLBD2Q8NHP8 589 aa12.2□□□□□ -0.46
CDCA3-204ENST00000535406 RPGRQ92834 1020 aaKnown RBP12.2□□□□□ -0.46
CDCA3-204ENST00000535406 TSR2Q969E8 191 aaKnown RBP12.2□□□□□ -0.46
CDCA3-204ENST00000535406 UTP14AQ9BVJ6 771 aaKnown RBP12.2□□□□□ -0.46
CDCA3-204ENST00000535406 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
CDCA3-204ENST00000535406 CCDC93Q567U6 631 aa12.19□□□□□ -0.46
CDCA3-204ENST00000535406 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
CDCA3-204ENST00000535406 NLRP10Q86W26 655 aa12.19□□□□□ -0.46
CDCA3-204ENST00000535406 CHMP4AQ9BY43 222 aa12.19□□□□□ -0.46
CDCA3-204ENST00000535406 KDM2BQ8NHM5 1336 aa12.19□□□□□ -0.46
CDCA3-204ENST00000535406 LTBP3Q9NS15 1303 aa12.19□□□□□ -0.46
CDCA3-204ENST00000535406 ALDH1B1P30837 517 aa12.18□□□□□ -0.46
CDCA3-204ENST00000535406 PRELPP51888 382 aa12.18□□□□□ -0.46
CDCA3-204ENST00000535406 GOLGA2Q08379 1002 aa12.18□□□□□ -0.46
CDCA3-204ENST00000535406 CCDC30Q5VVM6 783 aa12.18□□□□□ -0.46
CDCA3-204ENST00000535406 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-204ENST00000535406 DICER1Q9UPY3 1922 aaKnown RBP12.18□□□□□ -0.46
CDCA3-204ENST00000535406 SH3TC1Q8TE82 1336 aa12.18□□□□□ -0.46
CDCA3-204ENST00000535406 KIF3CO14782 793 aa12.17□□□□□ -0.46
CDCA3-204ENST00000535406 TSPYL6Q8N831 410 aa12.17□□□□□ -0.46
CDCA3-204ENST00000535406 C7orf43Q8WVR3 580 aa12.17□□□□□ -0.46
CDCA3-204ENST00000535406 NLRP3Q96P20 1036 aa12.17□□□□□ -0.46
CDCA3-204ENST00000535406 TRMT112Q9UI30 125 aaKnown RBP12.17□□□□□ -0.46
CDCA3-204ENST00000535406 LAMB2P55268 1798 aa12.17□□□□□ -0.46
CDCA3-204ENST00000535406 FANCIQ9NVI1 1328 aa12.17□□□□□ -0.46
CDCA3-204ENST00000535406 HOXA10P31260 410 aaPredicted RBP12.16□□□□□ -0.46
CDCA3-204ENST00000535406 TWISTNBQ3B726 338 aaPredicted RBP12.16□□□□□ -0.46
CDCA3-204ENST00000535406 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
CDCA3-204ENST00000535406 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
CDCA3-204ENST00000535406 WDR63Q8IWG1 891 aa12.16□□□□□ -0.46
CDCA3-204ENST00000535406 RBM17Q96I25 401 aaKnown RBP12.16□□□□□ -0.46
CDCA3-204ENST00000535406 PHAXQ9H814 394 aaKnown RBP12.16□□□□□ -0.46
CDCA3-204ENST00000535406 NMRK2Q9NPI5 230 aa12.16□□□□□ -0.46
CDCA3-204ENST00000535406 DDX60Q8IY21 1712 aaKnown RBP12.16□□□□□ -0.46
CDCA3-204ENST00000535406 ATP5J2-PTCD1G3V325 749 aa12.15□□□□□ -0.46
CDCA3-204ENST00000535406 DDX58O95786 925 aaKnown RBP12.15□□□□□ -0.46
CDCA3-204ENST00000535406 FKBP4Q02790 459 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDCA3-204ENST00000535406 SLC10A5Q5PT55 438 aa12.15□□□□□ -0.46
CDCA3-204ENST00000535406 OLFM4Q6UX06 510 aa12.15□□□□□ -0.46
CDCA3-204ENST00000535406 ISCA1Q9BUE6 129 aa12.15□□□□□ -0.46
CDCA3-204ENST00000535406 STK31Q9BXU1 1019 aa12.15□□□□□ -0.46
CDCA3-204ENST00000535406 PPEF1O14829 653 aaPredicted RBP12.14□□□□□ -0.47
CDCA3-204ENST00000535406 HCLS1P14317 486 aaPredicted RBP12.14□□□□□ -0.47
CDCA3-204ENST00000535406 RTKN2Q8IZC4 609 aa12.14□□□□□ -0.47
CDCA3-204ENST00000535406 ZNF428Q96B54 188 aa12.14□□□□□ -0.47
CDCA3-204ENST00000535406 CRAMP1Q96RY5 1269 aa12.14□□□□□ -0.47
CDCA3-204ENST00000535406 SNED1Q8TER0 1413 aa12.14□□□□□ -0.47
CDCA3-204ENST00000535406 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
CDCA3-204ENST00000535406 CC2D2BQ6DHV5 1058 aa12.13□□□□□ -0.47
CDCA3-204ENST00000535406 C16orf71Q8IYS4 520 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-204ENST00000535406 SYNE4Q8N205 404 aa12.13□□□□□ -0.47
CDCA3-204ENST00000535406 MYD88Q99836 296 aa12.13□□□□□ -0.47
CDCA3-204ENST00000535406 ABCC4O15439 1325 aa12.13□□□□□ -0.47
CDCA3-204ENST00000535406 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
CDCA3-204ENST00000535406 TRIM28Q13263 835 aaKnown RBP12.12□□□□□ -0.47
CDCA3-204ENST00000535406 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
CDCA3-204ENST00000535406 FAM89AQ96GI7 184 aa12.12□□□□□ -0.47
CDCA3-204ENST00000535406 MYH16Q9H6N6 1097 aa12.12□□□□□ -0.47
CDCA3-204ENST00000535406 ZNF277Q9NRM2 450 aaPredicted RBP12.12□□□□□ -0.47
CDCA3-204ENST00000535406 TOMM70O94826 608 aa12.11□□□□□ -0.47
CDCA3-204ENST00000535406 GRIPAP1Q4V328 841 aa12.11□□□□□ -0.47
CDCA3-204ENST00000535406 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-204ENST00000535406 DDX46Q7L014 1031 aaKnown RBP12.11□□□□□ -0.47
CDCA3-204ENST00000535406 PSMD1Q99460 953 aa12.11□□□□□ -0.47
CDCA3-204ENST00000535406 TMX4Q9H1E5 349 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-204ENST00000535406 RRAGCQ9HB90 399 aa12.11□□□□□ -0.47
CDCA3-204ENST00000535406 MAP3K2Q9Y2U5 619 aa12.11□□□□□ -0.47
CDCA3-204ENST00000535406 CACNA1FO60840 1977 aa12.11□□□□□ -0.47
CDCA3-204ENST00000535406 WDR90Q96KV7 1748 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms