RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 ABCF2Q9UG63 623 aa6.36□□□□□ -1.39
SNHG1-201ENST00000535076 SMC3Q9UQE7 1217 aa6.36□□□□□ -1.39
SNHG1-201ENST00000535076 CCDC196A0A1B0GTZ2 297 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 ANKRD33BA6NCL7 494 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 GOLGA6CA6NDK9 693 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 GOLGA6BA6NDN3 693 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 EXOC5O00471 708 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 MYCP01106 439 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-201ENST00000535076 GOLGA6DP0CG33 693 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 GUCY2CP25092 1073 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 DBN1Q16643 649 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 SLC27A3Q5K4L6 730 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 KRBA2Q6ZNG9 492 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 NOL8Q76FK4 1167 aaKnown RBP6.35□□□□□ -1.39
SNHG1-201ENST00000535076 AEBP1Q8IUX7 1158 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 WHAMMQ8TF30 809 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 CLUAP1Q96AJ1 413 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 ZNF837Q96EG3 531 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-201ENST00000535076 UCN2Q96RP3 112 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 FEZ1Q99689 392 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 TEX13AQ9BXU3 409 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-201ENST00000535076 GOLGA6AQ9NYA3 693 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 FAM13BQ9NYF5 915 aa6.35□□□□□ -1.39
SNHG1-201ENST00000535076 RAD54L2Q9Y4B4 1467 aa6.34□□□□□ -1.39
SNHG1-201ENST00000535076 MPHOSPH10O00566 681 aaKnown RBP6.34□□□□□ -1.39
SNHG1-201ENST00000535076 IPO8O15397 1037 aaKnown RBP6.34□□□□□ -1.39
SNHG1-201ENST00000535076 POLD1P28340 1107 aa6.34□□□□□ -1.39
SNHG1-201ENST00000535076 TDO2P48775 406 aa6.34□□□□□ -1.39
SNHG1-201ENST00000535076 GTF2A1P52655 376 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-201ENST00000535076 FOXD4L6Q3SYB3 417 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-201ENST00000535076 HDGFL1Q5TGJ6 251 aa6.34□□□□□ -1.39
SNHG1-201ENST00000535076 TMCO4Q5TGY1 634 aa6.34□□□□□ -1.39
SNHG1-201ENST00000535076 WDR78Q5VTH9 848 aa6.34□□□□□ -1.39
SNHG1-201ENST00000535076 FOXD4L3Q6VB84 417 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-201ENST00000535076 SV2AQ7L0J3 742 aa6.34□□□□□ -1.39
SNHG1-201ENST00000535076 ERCC4Q92889 916 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-201ENST00000535076 NUCKS1Q9H1E3 243 aaKnown RBP6.34□□□□□ -1.39
SNHG1-201ENST00000535076 C1orf115Q9H7X2 142 aa6.34□□□□□ -1.39
SNHG1-201ENST00000535076 USP3Q9Y6I4 520 aa6.34□□□□□ -1.39
SNHG1-201ENST00000535076 CCDC189A1A4V9 331 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 GPR25O00155 361 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 WASLO00401 505 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-201ENST00000535076 TPD52L2O43399 206 aaKnown RBP6.33□□□□□ -1.4
SNHG1-201ENST00000535076 XRCC6P12956 609 aaKnown RBP eCLIP6.33□□□□□ -1.4
SNHG1-201ENST00000535076 SSFA2P28290 1259 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 MCM5P33992 734 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 SOX11P35716 441 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 PHKA2P46019 1235 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 NOP2P46087 812 aaKnown RBP6.33□□□□□ -1.4
SNHG1-201ENST00000535076 FLIIQ13045 1269 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 C1QTNF12Q5T7M4 302 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 ICE2Q659A1 982 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 ZNF280DQ6N043 979 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 TACO1Q9BSH4 297 aaKnown RBP6.33□□□□□ -1.4
SNHG1-201ENST00000535076 FRMD4BQ9Y2L6 1034 aa6.33□□□□□ -1.4
SNHG1-201ENST00000535076 TMEM229AB2RXF0 380 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 EIF3JO75822 258 aaKnown RBP6.32□□□□□ -1.4
SNHG1-201ENST00000535076 BRD1O95696 1058 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 HSPA5P11021 654 aaKnown RBP6.32□□□□□ -1.4
SNHG1-201ENST00000535076 CAPN2P17655 700 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 USP4Q13107 963 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 LONRF3Q496Y0 759 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 C4orf17Q53FE4 359 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 ZSCAN30Q86W11 494 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 TRIM22Q8IYM9 498 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 ZNF295-AS1Q8N0V1 137 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 DEPDC4Q8N2C3 294 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 FNBP4Q8N3X1 1017 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-201ENST00000535076 TBC1D22AQ8WUA7 517 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 FOXD4L4Q8WXT5 416 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-201ENST00000535076 RANBP17Q9H2T7 1088 aaKnown RBP6.32□□□□□ -1.4
SNHG1-201ENST00000535076 JADE2Q9NQC1 790 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 DYRK1BQ9Y463 629 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 PCDHGA11Q9Y5H2 935 aa6.32□□□□□ -1.4
SNHG1-201ENST00000535076 DHX16O60231 1041 aaKnown RBP6.31□□□□□ -1.4
SNHG1-201ENST00000535076 SKIP12755 728 aa6.31□□□□□ -1.4
SNHG1-201ENST00000535076 GTF2F1P35269 517 aaKnown RBP eCLIP6.31□□□□□ -1.4
SNHG1-201ENST00000535076 GDF10P55107 478 aa6.31□□□□□ -1.4
SNHG1-201ENST00000535076 GSCP56915 257 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-201ENST00000535076 MAP7D1Q3KQU3 841 aa6.31□□□□□ -1.4
SNHG1-201ENST00000535076 GJC2Q5T442 439 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-201ENST00000535076 LRCH2Q5VUJ6 765 aa6.31□□□□□ -1.4
SNHG1-201ENST00000535076 ZNF385CQ66K41 422 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-201ENST00000535076 RIPOR1Q6ZS17 1223 aa6.31□□□□□ -1.4
SNHG1-201ENST00000535076 TAS1R3Q7RTX0 852 aa6.31□□□□□ -1.4
SNHG1-201ENST00000535076 GTPBP3Q969Y2 492 aaKnown RBP6.31□□□□□ -1.4
SNHG1-201ENST00000535076 TRIM52Q96A61 297 aa6.31□□□□□ -1.4
SNHG1-201ENST00000535076 ZSCAN10Q96SZ4 725 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-201ENST00000535076 GAS2L1Q99501 681 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-201ENST00000535076 ESF1Q9H501 851 aaKnown RBP6.31□□□□□ -1.4
SNHG1-201ENST00000535076 TIMMDC1Q9NPL8 285 aa6.31□□□□□ -1.4
SNHG1-201ENST00000535076 MAGEC2Q9UBF1 373 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-201ENST00000535076 ANKRD18BA2A2Z9 1011 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 INHAP05111 366 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 TPM3P06753 285 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 SETSIPP0DME0 302 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 SLURP2P0DP57 97 aa6.3□□□□□ -1.4
SNHG1-201ENST00000535076 TNNT3P45378 269 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-201ENST00000535076 SARNPP82979 210 aaKnown RBP6.3□□□□□ -1.4
SNHG1-201ENST00000535076 NCOA4Q13772 614 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms