RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 ASAP1Q9ULH1 1129 aa14.45□□□□□ -0.1
TNC-209ENST00000534839 PCDH11XQ9BZA7 1347 aa14.44□□□□□ -0.1
TNC-209ENST00000534839 PCDH11YQ9BZA8 1340 aa14.44□□□□□ -0.1
TNC-209ENST00000534839 CYP27B1O15528 508 aa14.44□□□□□ -0.1
TNC-209ENST00000534839 USHBP1Q8N6Y0 703 aa14.44□□□□□ -0.1
TNC-209ENST00000534839 SRP68Q9UHB9 627 aaKnown RBP14.44□□□□□ -0.1
TNC-209ENST00000534839 CGNL1Q0VF96 1302 aa14.43□□□□□ -0.1
TNC-209ENST00000534839 POLRMTO00411 1230 aaKnown RBP14.43□□□□□ -0.1
TNC-209ENST00000534839 TSR1Q2NL82 804 aaKnown RBP14.43□□□□□ -0.1
TNC-209ENST00000534839 FBXW7Q969H0 707 aa14.43□□□□□ -0.1
TNC-209ENST00000534839 CD163L1Q9NR16 1453 aa14.43□□□□□ -0.1
TNC-209ENST00000534839 DLEC1Q9Y238 1755 aa14.42□□□□□ -0.1
TNC-209ENST00000534839 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
TNC-209ENST00000534839 BRPF1P55201 1214 aaPredicted RBP14.42□□□□□ -0.1
TNC-209ENST00000534839 NBPF6Q5VWK0 638 aa14.42□□□□□ -0.1
TNC-209ENST00000534839 NBPF4Q96M43 638 aa14.42□□□□□ -0.1
TNC-209ENST00000534839 KCNK17Q96T54 332 aa14.42□□□□□ -0.1
TNC-209ENST00000534839 TATP17735 454 aaPredicted RBP14.41□□□□□ -0.1
TNC-209ENST00000534839 EPHX2P34913 555 aa14.41□□□□□ -0.1
TNC-209ENST00000534839 DMRTA1Q5VZB9 504 aa14.41□□□□□ -0.1
TNC-209ENST00000534839 CIAPIN1Q6FI81 312 aa14.41□□□□□ -0.1
TNC-209ENST00000534839 RAPGEF4Q8WZA2 1011 aa14.41□□□□□ -0.1
TNC-209ENST00000534839 HACL1Q9UJ83 578 aa14.41□□□□□ -0.1
TNC-209ENST00000534839 TLL2Q9Y6L7 1015 aa14.41□□□□□ -0.1
TNC-209ENST00000534839 ARHGAP33O14559 1287 aa14.4□□□□□ -0.1
TNC-209ENST00000534839 TM4SF1P30408 202 aa14.4□□□□□ -0.1
TNC-209ENST00000534839 C6orf132Q5T0Z8 1188 aa14.4□□□□□ -0.1
TNC-209ENST00000534839 RC3H1Q5TC82 1133 aaKnown RBP14.4□□□□□ -0.1
TNC-209ENST00000534839 CST9Q5W186 159 aa14.4□□□□□ -0.1
TNC-209ENST00000534839 STAC3Q96MF2 364 aa14.4□□□□□ -0.1
TNC-209ENST00000534839 SLC4A9Q96Q91 983 aa14.4□□□□□ -0.1
TNC-209ENST00000534839 MON2Q7Z3U7 1717 aa14.39□□□□□ -0.11
TNC-209ENST00000534839 MAP3K7O43318 606 aa14.39□□□□□ -0.11
TNC-209ENST00000534839 COL9A1P20849 921 aa14.39□□□□□ -0.11
TNC-209ENST00000534839 HOXC9P31274 260 aa14.39□□□□□ -0.11
TNC-209ENST00000534839 FER1L6Q2WGJ9 1857 aa14.38□□□□□ -0.11
TNC-209ENST00000534839 C21orf2O43822 256 aa14.38□□□□□ -0.11
TNC-209ENST00000534839 RBM26Q5T8P6 1007 aaKnown RBP14.38□□□□□ -0.11
TNC-209ENST00000534839 PNMA8AQ86V59 439 aaPredicted RBP14.38□□□□□ -0.11
TNC-209ENST00000534839 C2CD5Q86YS7 1000 aa14.38□□□□□ -0.11
TNC-209ENST00000534839 CDHR5Q9HBB8 845 aa14.38□□□□□ -0.11
TNC-209ENST00000534839 ATG3Q9NT62 314 aa14.38□□□□□ -0.11
TNC-209ENST00000534839 CNTNAP4Q9C0A0 1308 aa14.38□□□□□ -0.11
TNC-209ENST00000534839 USP42Q9H9J4 1324 aaKnown RBP14.38□□□□□ -0.11
TNC-209ENST00000534839 KDRP35968 1356 aa14.37□□□□□ -0.11
TNC-209ENST00000534839 PBX2P40425 430 aa14.37□□□□□ -0.11
TNC-209ENST00000534839 HPS5Q9UPZ3 1129 aa14.37□□□□□ -0.11
TNC-209ENST00000534839 SMG6Q86US8 1419 aaKnown RBP14.37□□□□□ -0.11
TNC-209ENST00000534839 SZT2Q5T011 3432 aa14.37□□□□□ -0.11
TNC-209ENST00000534839 LTBP3Q9NS15 1303 aa14.37□□□□□ -0.11
TNC-209ENST00000534839 PTPREP23469 700 aa14.36□□□□□ -0.11
TNC-209ENST00000534839 TAOK3Q9H2K8 898 aa14.36□□□□□ -0.11
TNC-209ENST00000534839 TMOD3Q9NYL9 352 aa14.36□□□□□ -0.11
TNC-209ENST00000534839 EVC2Q86UK5 1308 aa14.36□□□□□ -0.11
TNC-209ENST00000534839 SBNO2Q9Y2G9 1366 aa14.35□□□□□ -0.11
TNC-209ENST00000534839 COL5A3P25940 1745 aaPredicted RBP14.35□□□□□ -0.11
TNC-209ENST00000534839 ZIC5Q96T25 663 aa14.35□□□□□ -0.11
TNC-209ENST00000534839 MAP3K19Q56UN5 1328 aa14.35□□□□□ -0.11
TNC-209ENST00000534839 RNF123Q5XPI4 1314 aa14.35□□□□□ -0.11
TNC-209ENST00000534839 ZNF541Q9H0D2 1346 aa14.35□□□□□ -0.11
TNC-209ENST00000534839 H0YIN7 160 aa14.34□□□□□ -0.11
TNC-209ENST00000534839 TRAF5O00463 557 aa14.34□□□□□ -0.11
TNC-209ENST00000534839 FBLN1P23142 703 aa14.33□□□□□ -0.12
TNC-209ENST00000534839 AMPHP49418 695 aa14.33□□□□□ -0.12
TNC-209ENST00000534839 LSM11P83369 360 aaKnown RBP eCLIP14.33□□□□□ -0.12
TNC-209ENST00000534839 SAPCD2Q86UD0 394 aa14.33□□□□□ -0.12
TNC-209ENST00000534839 AFDNP55196 1824 aaKnown RBP14.33□□□□□ -0.12
TNC-209ENST00000534839 CTU1Q7Z7A3 348 aaKnown RBP14.32□□□□□ -0.12
TNC-209ENST00000534839 NRXN2Q9P2S2 1712 aa14.32□□□□□ -0.12
TNC-209ENST00000534839 MYH14Q7Z406 1995 aaKnown RBP14.31□□□□□ -0.12
TNC-209ENST00000534839 SMYD5Q6GMV2 418 aa14.31□□□□□ -0.12
TNC-209ENST00000534839 ANKRD13DQ6ZTN6 518 aa14.31□□□□□ -0.12
TNC-209ENST00000534839 NPDC1Q9NQX5 325 aaPredicted RBP14.31□□□□□ -0.12
TNC-209ENST00000534839 CARMIL3Q8ND23 1372 aa14.31□□□□□ -0.12
TNC-209ENST00000534839 A0A0C4DFX4 3053 aa14.3□□□□□ -0.12
TNC-209ENST00000534839 ZNF831Q5JPB2 1677 aa14.3□□□□□ -0.12
TNC-209ENST00000534839 TRPM7Q96QT4 1865 aa14.3□□□□□ -0.12
TNC-209ENST00000534839 ZNF622Q969S3 477 aaKnown RBP eCLIP14.3□□□□□ -0.12
TNC-209ENST00000534839 NFIXQ14938 502 aa14.29□□□□□ -0.12
TNC-209ENST00000534839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.29□□□□□ -0.12
TNC-209ENST00000534839 HHIPL1Q96JK4 782 aa14.29□□□□□ -0.12
TNC-209ENST00000534839 INSRP06213 1382 aa14.29□□□□□ -0.12
TNC-209ENST00000534839 PPP1R3GB7ZBB8 358 aa14.28□□□□□ -0.12
TNC-209ENST00000534839 SERPINB2P05120 415 aa14.28□□□□□ -0.12
TNC-209ENST00000534839 USPL1Q5W0Q7 1092 aa14.28□□□□□ -0.12
TNC-209ENST00000534839 ZBED2Q9BTP6 218 aa14.28□□□□□ -0.12
TNC-209ENST00000534839 PROX2Q3B8N5 592 aa14.27□□□□□ -0.13
TNC-209ENST00000534839 SAGE1Q9NXZ1 904 aa14.27□□□□□ -0.13
TNC-209ENST00000534839 MKI67P46013 3256 aaKnown RBP14.26□□□□□ -0.13
TNC-209ENST00000534839 CRKLP46109 303 aaKnown RBP14.26□□□□□ -0.13
TNC-209ENST00000534839 NOGQ13253 232 aa14.26□□□□□ -0.13
TNC-209ENST00000534839 BICDL1Q6ZP65 573 aa14.26□□□□□ -0.13
TNC-209ENST00000534839 TRPA1O75762 1119 aa14.25□□□□□ -0.13
TNC-209ENST00000534839 CELF2O95319 508 aaKnown RBP14.25□□□□□ -0.13
TNC-209ENST00000534839 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
TNC-209ENST00000534839 VPS9D1Q9Y2B5 631 aa14.25□□□□□ -0.13
TNC-209ENST00000534839 RNF186Q9NXI6 227 aa14.24□□□□□ -0.13
TNC-209ENST00000534839 COL6A3P12111 3177 aa14.24□□□□□ -0.13
TNC-209ENST00000534839 CUL9Q8IWT3 2517 aa14.23□□□□□ -0.13
TNC-209ENST00000534839 ZPR1O75312 459 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms