RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 XAGE3Q8WTP9 111 aa27.98■■■□□ 2.07
GSDMD-216ENST00000534602 NECTIN2Q92692 538 aa27.98■■■□□ 2.07
GSDMD-216ENST00000534602 RNF123Q5XPI4 1314 aa27.97■■■□□ 2.07
GSDMD-216ENST00000534602 ZNF853P0CG23 659 aa27.97■■■□□ 2.07
GSDMD-216ENST00000534602 RPGRQ92834 1020 aaKnown RBP27.97■■■□□ 2.07
GSDMD-216ENST00000534602 WDR90Q96KV7 1748 aa27.96■■■□□ 2.07
GSDMD-216ENST00000534602 SLC10A5Q5PT55 438 aa27.96■■■□□ 2.07
GSDMD-216ENST00000534602 HDGFL1Q5TGJ6 251 aa27.96■■■□□ 2.07
GSDMD-216ENST00000534602 CC2D2BQ6DHV5 1058 aa27.96■■■□□ 2.07
GSDMD-216ENST00000534602 SMC1BQ8NDV3 1235 aa27.96■■■□□ 2.07
GSDMD-216ENST00000534602 UTP14AQ9BVJ6 771 aaKnown RBP27.96■■■□□ 2.07
GSDMD-216ENST00000534602 AIMP1Q12904 312 aaKnown RBP27.95■■■□□ 2.06
GSDMD-216ENST00000534602 CHPF2Q9P2E5 772 aa27.95■■■□□ 2.06
GSDMD-216ENST00000534602 DBF4Q9UBU7 674 aaPredicted RBP27.95■■■□□ 2.06
GSDMD-216ENST00000534602 GRIPAP1Q4V328 841 aa27.94■■■□□ 2.06
GSDMD-216ENST00000534602 RBM17Q96I25 401 aaKnown RBP27.94■■■□□ 2.06
GSDMD-216ENST00000534602 CRAMP1Q96RY5 1269 aa27.94■■■□□ 2.06
GSDMD-216ENST00000534602 MBIPQ9NS73 344 aa27.94■■■□□ 2.06
GSDMD-216ENST00000534602 IFT57Q9NWB7 429 aa27.94■■■□□ 2.06
GSDMD-216ENST00000534602 POTECB2RU33 542 aa27.93■■■□□ 2.06
GSDMD-216ENST00000534602 GNAI1P63096 354 aa27.93■■■□□ 2.06
GSDMD-216ENST00000534602 TCIRG1Q13488 830 aa27.93■■■□□ 2.06
GSDMD-216ENST00000534602 NLRP3Q96P20 1036 aa27.93■■■□□ 2.06
GSDMD-216ENST00000534602 DUSP27Q5VZP5 1158 aa27.92■■■□□ 2.06
GSDMD-216ENST00000534602 OLFM4Q6UX06 510 aa27.92■■■□□ 2.06
GSDMD-216ENST00000534602 PSMD1Q99460 953 aa27.92■■■□□ 2.06
GSDMD-216ENST00000534602 ANKRD36CQ5JPF3 1778 aa27.91■■■□□ 2.06
GSDMD-216ENST00000534602 NLRP10Q86W26 655 aa27.91■■■□□ 2.06
GSDMD-216ENST00000534602 SNED1Q8TER0 1413 aa27.91■■■□□ 2.06
GSDMD-216ENST00000534602 PLBD2Q8NHP8 589 aa27.9■■■□□ 2.06
GSDMD-216ENST00000534602 ZNF277Q9NRM2 450 aaPredicted RBP27.9■■■□□ 2.06
GSDMD-216ENST00000534602 HYPKQ9NX55 129 aa27.9■■■□□ 2.06
GSDMD-216ENST00000534602 SYNE4Q8N205 404 aa27.89■■■□□ 2.06
GSDMD-216ENST00000534602 DDNO94850 711 aaPredicted RBP27.88■■■□□ 2.05
GSDMD-216ENST00000534602 IARSP41252 1262 aaKnown RBP27.88■■■□□ 2.05
GSDMD-216ENST00000534602 ANKRD13DQ6ZTN6 518 aa27.88■■■□□ 2.05
GSDMD-216ENST00000534602 C3orf67Q6ZVT6 689 aa27.88■■■□□ 2.05
GSDMD-216ENST00000534602 DNAJC5GQ8N7S2 189 aa27.87■■■□□ 2.05
GSDMD-216ENST00000534602 L3MBTL3Q96JM7 780 aaPredicted RBP27.86■■■□□ 2.05
GSDMD-216ENST00000534602 TRMT112Q9UI30 125 aaKnown RBP27.86■■■□□ 2.05
GSDMD-216ENST00000534602 ZNF316A6NFI3 1004 aaPredicted RBP27.85■■■□□ 2.05
GSDMD-216ENST00000534602 PPEF1O14829 653 aaPredicted RBP27.85■■■□□ 2.05
GSDMD-216ENST00000534602 CCDC184Q52MB2 194 aa27.85■■■□□ 2.05
GSDMD-216ENST00000534602 CHMP4AQ9BY43 222 aa27.85■■■□□ 2.05
GSDMD-216ENST00000534602 SH3TC1Q8TE82 1336 aa27.85■■■□□ 2.05
GSDMD-216ENST00000534602 IQCA1LA6NCM1 817 aa27.84■■■□□ 2.05
GSDMD-216ENST00000534602 FZD9O00144 591 aa27.83■■■□□ 2.05
GSDMD-216ENST00000534602 ISCA1Q9BUE6 129 aa27.83■■■□□ 2.05
GSDMD-216ENST00000534602 CCDC27Q2M243 656 aa27.82■■■□□ 2.04
GSDMD-216ENST00000534602 JDP2Q8WYK2 163 aa27.82■■■□□ 2.04
GSDMD-216ENST00000534602 TMX4Q9H1E5 349 aaPredicted RBP27.82■■■□□ 2.04
GSDMD-216ENST00000534602 ATP6V0A2Q9Y487 856 aa27.82■■■□□ 2.04
GSDMD-216ENST00000534602 BBOX1O75936 387 aa27.81■■■□□ 2.04
GSDMD-216ENST00000534602 HCLS1P14317 486 aaPredicted RBP27.81■■■□□ 2.04
GSDMD-216ENST00000534602 TRIM28Q13263 835 aaKnown RBP27.81■■■□□ 2.04
GSDMD-216ENST00000534602 NCBP3Q53F19 620 aaKnown RBP27.81■■■□□ 2.04
GSDMD-216ENST00000534602 ABCC4O15439 1325 aa27.81■■■□□ 2.04
GSDMD-216ENST00000534602 SCN4AP35499 1836 aa27.81■■■□□ 2.04
GSDMD-216ENST00000534602 ZNF541Q9H0D2 1346 aa27.8■■■□□ 2.04
GSDMD-216ENST00000534602 ANP32CO43423 234 aa27.79■■■□□ 2.04
GSDMD-216ENST00000534602 VPS33BQ9H267 617 aa27.79■■■□□ 2.04
GSDMD-216ENST00000534602 ELL2O00472 640 aaPredicted RBP27.78■■■□□ 2.04
GSDMD-216ENST00000534602 CHADLQ6NUI6 762 aa27.78■■■□□ 2.04
GSDMD-216ENST00000534602 C8orf58Q8NAV2 365 aa27.78■■■□□ 2.04
GSDMD-216ENST00000534602 LAMB2P55268 1798 aa27.78■■■□□ 2.04
GSDMD-216ENST00000534602 GOLGA2Q08379 1002 aa27.77■■■□□ 2.04
GSDMD-216ENST00000534602 DDX46Q7L014 1031 aaKnown RBP27.77■■■□□ 2.04
GSDMD-216ENST00000534602 GPC2Q8N158 579 aa27.77■■■□□ 2.04
GSDMD-216ENST00000534602 TAF1DQ9H5J8 278 aaPredicted RBP27.77■■■□□ 2.04
GSDMD-216ENST00000534602 TCERG1O14776 1098 aaKnown RBP27.76■■■□□ 2.03
GSDMD-216ENST00000534602 SP8Q8IXZ3 490 aa27.76■■■□□ 2.03
GSDMD-216ENST00000534602 MRS2Q9HD23 443 aa27.76■■■□□ 2.03
GSDMD-216ENST00000534602 ATP5J2-PTCD1G3V325 749 aa27.75■■■□□ 2.03
GSDMD-216ENST00000534602 HTRA3P83110 453 aa27.75■■■□□ 2.03
GSDMD-216ENST00000534602 CCDC30Q5VVM6 783 aa27.75■■■□□ 2.03
GSDMD-216ENST00000534602 TMC4Q7Z404 712 aa27.75■■■□□ 2.03
GSDMD-216ENST00000534602 RIC3Q7Z5B4 369 aa27.75■■■□□ 2.03
GSDMD-216ENST00000534602 WWC1Q8IX03 1113 aa27.75■■■□□ 2.03
GSDMD-216ENST00000534602 LARGE2Q8N3Y3 721 aa27.75■■■□□ 2.03
GSDMD-216ENST00000534602 KLRG1Q96E93 195 aa27.75■■■□□ 2.03
GSDMD-216ENST00000534602 EIF6P56537 245 aaKnown RBP27.74■■■□□ 2.03
GSDMD-216ENST00000534602 GRAPQ13588 217 aa27.74■■■□□ 2.03
GSDMD-216ENST00000534602 SUPT20HQ8NEM7 779 aa27.74■■■□□ 2.03
GSDMD-216ENST00000534602 GRAPLQ8TC17 118 aaPredicted RBP27.74■■■□□ 2.03
GSDMD-216ENST00000534602 FAM89AQ96GI7 184 aa27.74■■■□□ 2.03
GSDMD-216ENST00000534602 RTFDC1Q9BY42 306 aaPredicted RBP27.74■■■□□ 2.03
GSDMD-216ENST00000534602 PHAXQ9H814 394 aaKnown RBP27.74■■■□□ 2.03
GSDMD-216ENST00000534602 HACL1Q9UJ83 578 aa27.74■■■□□ 2.03
GSDMD-216ENST00000534602 SF3B3Q15393 1217 aaKnown RBP27.73■■■□□ 2.03
GSDMD-216ENST00000534602 LDHDQ86WU2 507 aa27.73■■■□□ 2.03
GSDMD-216ENST00000534602 IL16Q14005 1332 aa27.72■■■□□ 2.03
GSDMD-216ENST00000534602 COL4A5P29400 1685 aa27.72■■■□□ 2.03
GSDMD-216ENST00000534602 SLC51AQ86UW1 340 aa27.72■■■□□ 2.03
GSDMD-216ENST00000534602 POTEIP0CG38 1075 aa27.71■■■□□ 2.03
GSDMD-216ENST00000534602 POTEJP0CG39 1038 aa27.71■■■□□ 2.03
GSDMD-216ENST00000534602 PNMA8AQ86V59 439 aaPredicted RBP27.71■■■□□ 2.03
GSDMD-216ENST00000534602 DDX60Q8IY21 1712 aaKnown RBP27.71■■■□□ 2.03
GSDMD-216ENST00000534602 PPIP5K2O43314 1243 aa27.7■■■□□ 2.02
GSDMD-216ENST00000534602 DDX58O95786 925 aaKnown RBP27.7■■■□□ 2.02
GSDMD-216ENST00000534602 HSP90B1P14625 803 aaKnown RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms