RNA–Protein interactions for RNA: ENST00000534495.1

LMNB2-206, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-206ENST00000534495 IL16Q14005 1332 aa27.62■■■□□ 2.01
LMNB2-206ENST00000534495 ANKRD13DQ6ZTN6 518 aa27.61■■■□□ 2.01
LMNB2-206ENST00000534495 TSR2Q969E8 191 aaKnown RBP27.61■■■□□ 2.01
LMNB2-206ENST00000534495 UTP14AQ9BVJ6 771 aaKnown RBP27.61■■■□□ 2.01
LMNB2-206ENST00000534495 SOGA3Q5TF21 947 aa27.6■■■□□ 2.01
LMNB2-206ENST00000534495 NLRP10Q86W26 655 aa27.6■■■□□ 2.01
LMNB2-206ENST00000534495 TIAM2Q8IVF5 1701 aa27.6■■■□□ 2.01
LMNB2-206ENST00000534495 LTBP3Q9NS15 1303 aa27.6■■■□□ 2.01
LMNB2-206ENST00000534495 ALDH1B1P30837 517 aa27.59■■■□□ 2.01
LMNB2-206ENST00000534495 FAM9BQ8IZU0 186 aa27.59■■■□□ 2.01
LMNB2-206ENST00000534495 TSPYL6Q8N831 410 aa27.59■■■□□ 2.01
LMNB2-206ENST00000534495 RNF123Q5XPI4 1314 aa27.59■■■□□ 2.01
LMNB2-206ENST00000534495 ZC3H4Q9UPT8 1303 aaKnown RBP27.59■■■□□ 2.01
LMNB2-206ENST00000534495 KIF3CO14782 793 aa27.58■■■□□ 2.01
LMNB2-206ENST00000534495 SLC10A5Q5PT55 438 aa27.58■■■□□ 2.01
LMNB2-206ENST00000534495 HOXA10P31260 410 aaPredicted RBP27.57■■■□□ 2
LMNB2-206ENST00000534495 CHMP4AQ9BY43 222 aa27.57■■■□□ 2
LMNB2-206ENST00000534495 LAMB2P55268 1798 aa27.57■■■□□ 2
LMNB2-206ENST00000534495 C3orf67Q6ZVT6 689 aa27.56■■■□□ 2
LMNB2-206ENST00000534495 TAOK3Q9H2K8 898 aa27.56■■■□□ 2
LMNB2-206ENST00000534495 PHAXQ9H814 394 aaKnown RBP27.56■■■□□ 2
LMNB2-206ENST00000534495 SALL2Q9Y467 1007 aaPredicted RBP27.56■■■□□ 2
LMNB2-206ENST00000534495 CCDC93Q567U6 631 aa27.55■■■□□ 2
LMNB2-206ENST00000534495 CCDC30Q5VVM6 783 aa27.55■■■□□ 2
LMNB2-206ENST00000534495 WDR63Q8IWG1 891 aa27.55■■■□□ 2
LMNB2-206ENST00000534495 RPGRQ92834 1020 aaKnown RBP27.54■■■□□ 2
LMNB2-206ENST00000534495 NLRP3Q96P20 1036 aa27.54■■■□□ 2
LMNB2-206ENST00000534495 ISCA1Q9BUE6 129 aa27.54■■■□□ 2
LMNB2-206ENST00000534495 NMRK2Q9NPI5 230 aa27.54■■■□□ 2
LMNB2-206ENST00000534495 KDM2BQ8NHM5 1336 aa27.53■■■□□ 2
LMNB2-206ENST00000534495 OLFM4Q6UX06 510 aa27.53■■■□□ 2
LMNB2-206ENST00000534495 TRMT112Q9UI30 125 aaKnown RBP27.53■■■□□ 2
LMNB2-206ENST00000534495 CACNA1FO60840 1977 aa27.52■■■□□ 2
LMNB2-206ENST00000534495 SYNE4Q8N205 404 aa27.52■■■□□ 2
LMNB2-206ENST00000534495 CRAMP1Q96RY5 1269 aa27.52■■■□□ 2
LMNB2-206ENST00000534495 SH3TC1Q8TE82 1336 aa27.51■■□□□ 1.99
LMNB2-206ENST00000534495 GOLGA2Q08379 1002 aa27.51■■□□□ 1.99
LMNB2-206ENST00000534495 TRIM28Q13263 835 aaKnown RBP27.51■■□□□ 1.99
LMNB2-206ENST00000534495 RBM17Q96I25 401 aaKnown RBP27.51■■□□□ 1.99
LMNB2-206ENST00000534495 DDX60Q8IY21 1712 aaKnown RBP27.5■■□□□ 1.99
LMNB2-206ENST00000534495 FANCIQ9NVI1 1328 aa27.5■■□□□ 1.99
LMNB2-206ENST00000534495 ATP5J2-PTCD1G3V325 749 aa27.5■■□□□ 1.99
LMNB2-206ENST00000534495 TWISTNBQ3B726 338 aaPredicted RBP27.5■■□□□ 1.99
LMNB2-206ENST00000534495 RIC3Q7Z5B4 369 aa27.5■■□□□ 1.99
LMNB2-206ENST00000534495 RTKN2Q8IZC4 609 aa27.5■■□□□ 1.99
LMNB2-206ENST00000534495 SNED1Q8TER0 1413 aa27.5■■□□□ 1.99
LMNB2-206ENST00000534495 HCLS1P14317 486 aaPredicted RBP27.49■■□□□ 1.99
LMNB2-206ENST00000534495 FKBP4Q02790 459 aaKnown RBP eCLIP27.49■■□□□ 1.99
LMNB2-206ENST00000534495 CEP350Q5VT06 3117 aa27.48■■□□□ 1.99
LMNB2-206ENST00000534495 GLTPD2A6NH11 291 aa27.48■■□□□ 1.99
LMNB2-206ENST00000534495 ZNF428Q96B54 188 aa27.47■■□□□ 1.99
LMNB2-206ENST00000534495 TAF1P21675 1872 aa27.47■■□□□ 1.99
LMNB2-206ENST00000534495 CC2D2BQ6DHV5 1058 aa27.46■■□□□ 1.99
LMNB2-206ENST00000534495 STK31Q9BXU1 1019 aa27.46■■□□□ 1.99
LMNB2-206ENST00000534495 SPINK5Q9NQ38 1064 aaPredicted RBP27.46■■□□□ 1.99
LMNB2-206ENST00000534495 FAM89AQ96GI7 184 aa27.45■■□□□ 1.98
LMNB2-206ENST00000534495 RRAGCQ9HB90 399 aa27.45■■□□□ 1.98
LMNB2-206ENST00000534495 TCERG1O14776 1098 aaKnown RBP27.44■■□□□ 1.98
LMNB2-206ENST00000534495 TOMM70O94826 608 aa27.44■■□□□ 1.98
LMNB2-206ENST00000534495 DDX58O95786 925 aaKnown RBP27.44■■□□□ 1.98
LMNB2-206ENST00000534495 ZNF277Q9NRM2 450 aaPredicted RBP27.44■■□□□ 1.98
LMNB2-206ENST00000534495 ABCC4O15439 1325 aa27.43■■□□□ 1.98
LMNB2-206ENST00000534495 PPEF1O14829 653 aaPredicted RBP27.43■■□□□ 1.98
LMNB2-206ENST00000534495 PSMD1Q99460 953 aa27.43■■□□□ 1.98
LMNB2-206ENST00000534495 MYD88Q99836 296 aa27.43■■□□□ 1.98
LMNB2-206ENST00000534495 WDR90Q96KV7 1748 aa27.42■■□□□ 1.98
LMNB2-206ENST00000534495 GRIPAP1Q4V328 841 aa27.42■■□□□ 1.98
LMNB2-206ENST00000534495 DPY19L2Q6NUT2 758 aa27.42■■□□□ 1.98
LMNB2-206ENST00000534495 METTL22Q9BUU2 404 aaPredicted RBP27.42■■□□□ 1.98
LMNB2-206ENST00000534495 VAMP4O75379 141 aa27.41■■□□□ 1.98
LMNB2-206ENST00000534495 SLC4A2P04920 1241 aa27.41■■□□□ 1.98
LMNB2-206ENST00000534495 EXOSC9Q06265 439 aaKnown RBP27.41■■□□□ 1.98
LMNB2-206ENST00000534495 KSR2Q6VAB6 950 aa27.41■■□□□ 1.98
LMNB2-206ENST00000534495 SLC51AQ86UW1 340 aa27.41■■□□□ 1.98
LMNB2-206ENST00000534495 ZNF521Q96K83 1311 aa27.41■■□□□ 1.98
LMNB2-206ENST00000534495 G2E3Q7L622 706 aa27.4■■□□□ 1.98
LMNB2-206ENST00000534495 ZBTB38Q8NAP3 1195 aaPredicted RBP27.4■■□□□ 1.98
LMNB2-206ENST00000534495 CCDC191Q8NCU4 936 aa27.4■■□□□ 1.98
LMNB2-206ENST00000534495 MAP3K2Q9Y2U5 619 aa27.4■■□□□ 1.98
LMNB2-206ENST00000534495 PI4KAP2A4QPH2 592 aa27.39■■□□□ 1.98
LMNB2-206ENST00000534495 BBOX1O75936 387 aa27.39■■□□□ 1.98
LMNB2-206ENST00000534495 RTL5Q5HYW3 569 aaPredicted RBP27.39■■□□□ 1.98
LMNB2-206ENST00000534495 DDX46Q7L014 1031 aaKnown RBP27.39■■□□□ 1.98
LMNB2-206ENST00000534495 PI4KAP1Q8N8J0 262 aa27.39■■□□□ 1.98
LMNB2-206ENST00000534495 MYH16Q9H6N6 1097 aa27.39■■□□□ 1.98
LMNB2-206ENST00000534495 ATP6V0A2Q9Y487 856 aa27.39■■□□□ 1.98
LMNB2-206ENST00000534495 IRS4O14654 1257 aaPredicted RBP27.38■■□□□ 1.97
LMNB2-206ENST00000534495 IARSP41252 1262 aaKnown RBP27.38■■□□□ 1.97
LMNB2-206ENST00000534495 SF3B3Q15393 1217 aaKnown RBP27.38■■□□□ 1.97
LMNB2-206ENST00000534495 VEGFAP15692 232 aaPredicted RBP27.37■■□□□ 1.97
LMNB2-206ENST00000534495 GRAPQ13588 217 aa27.37■■□□□ 1.97
LMNB2-206ENST00000534495 C16orf71Q8IYS4 520 aaPredicted RBP27.37■■□□□ 1.97
LMNB2-206ENST00000534495 RBM46Q8TBY0 533 aaKnown RBP27.37■■□□□ 1.97
LMNB2-206ENST00000534495 GRAPLQ8TC17 118 aaPredicted RBP27.37■■□□□ 1.97
LMNB2-206ENST00000534495 POTECB2RU33 542 aa27.36■■□□□ 1.97
LMNB2-206ENST00000534495 PCCAP05165 728 aaPredicted RBP27.36■■□□□ 1.97
LMNB2-206ENST00000534495 CWC25Q9NXE8 425 aaPredicted RBP27.36■■□□□ 1.97
LMNB2-206ENST00000534495 CCER2I3L3R5 266 aa27.35■■□□□ 1.97
LMNB2-206ENST00000534495 HSPA6P17066 643 aa27.35■■□□□ 1.97
LMNB2-206ENST00000534495 SP8Q8IXZ3 490 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms