RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	CCDC102B	Q68D86	513 aa		7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SAMD9	Q5K651	1589 aa		7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442	FMN1	Q68DA7	1419 aa		7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442		A0A0G2JS52	829 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	CCDC85C	A6NKD9	419 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SFI1	A8K8P3	1242 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SCNN1A	P37088	669 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	RAB15	P59190	212 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	MYT1	Q01538	1121 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	INTS6L	Q5JSJ4	861 aa	Known RBP	7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	PPP1R18	Q6NYC8	613 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	UNC5CL	Q8IV45	518 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	TPCN2	Q8NHX9	752 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	PDGFD	Q9GZP0	370 aa	Predicted RBP	7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	MAP4K5	Q9Y4K4	846 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	CACNA1A	O00555	2505 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	ADCY9	O60503	1353 aa		7.43	□□□□□ -1.22
ECHDC1-223	ENST00000534442	GPATCH8	Q9UKJ3	1502 aa	Known RBP	7.42	□□□□□ -1.22
ECHDC1-223	ENST00000534442	ARID4A	P29374	1257 aa	Predicted RBP	7.42	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SCTR	P47872	440 aa		7.42	□□□□□ -1.22
ECHDC1-223	ENST00000534442	RPIA	P49247	311 aa		7.42	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SEC13	P55735	322 aa		7.42	□□□□□ -1.22
ECHDC1-223	ENST00000534442	RNF166	Q96A37	237 aa	Predicted RBP	7.42	□□□□□ -1.22
ECHDC1-223	ENST00000534442	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	7.42	□□□□□ -1.22
ECHDC1-223	ENST00000534442	EID1	Q9Y6B2	187 aa		7.42	□□□□□ -1.22
ECHDC1-223	ENST00000534442	EFCAB6	Q5THR3	1501 aa		7.42	□□□□□ -1.22
ECHDC1-223	ENST00000534442	ERVH48-1	M5A8F1	160 aa		7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	TOMM70	O94826	608 aa		7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	APBA3	O96018	575 aa		7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	GGCX	P38435	758 aa		7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	OCLN	Q16625	522 aa		7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	VASH1	Q7L8A9	365 aa	Predicted RBP	7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	CCER1	Q8TC90	406 aa	Predicted RBP	7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	EMID1	Q96A84	441 aa	Predicted RBP	7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SIRT1	Q96EB6	747 aa		7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	MARF1	Q9Y4F3	1742 aa	Known RBP	7.41	□□□□□ -1.22
ECHDC1-223	ENST00000534442	PRMT3	O60678	531 aa		7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	TRIM37	O94972	964 aa		7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	PSME1	Q06323	249 aa		7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	RC3H1	Q5TC82	1133 aa	Known RBP	7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	LIAT1	Q6ZQX7	453 aa		7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SPNS2	Q8IVW8	549 aa		7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	C1orf216	Q8TAB5	229 aa		7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	PRIMPOL	Q96LW4	560 aa		7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	CDK15	Q96Q40	435 aa		7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	C19orf44	Q9H6X5	657 aa		7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	MAP3K5	Q99683	1374 aa		7.4	□□□□□ -1.22
ECHDC1-223	ENST00000534442	NCOA3	Q9Y6Q9	1424 aa		7.39	□□□□□ -1.23
ECHDC1-223	ENST00000534442	LGR5	O75473	907 aa		7.39	□□□□□ -1.23
ECHDC1-223	ENST00000534442	GRM5	P41594	1212 aa		7.39	□□□□□ -1.23
ECHDC1-223	ENST00000534442	CCDC27	Q2M243	656 aa		7.39	□□□□□ -1.23
ECHDC1-223	ENST00000534442	TAS1R3	Q7RTX0	852 aa		7.39	□□□□□ -1.23
ECHDC1-223	ENST00000534442	EHBP1	Q8NDI1	1231 aa		7.39	□□□□□ -1.23
ECHDC1-223	ENST00000534442	TET3	O43151	1660 aa		7.38	□□□□□ -1.23
ECHDC1-223	ENST00000534442	MYOM2	P54296	1465 aa		7.38	□□□□□ -1.23
ECHDC1-223	ENST00000534442	SIAH2	O43255	324 aa		7.38	□□□□□ -1.23
ECHDC1-223	ENST00000534442	MYC	P01106	439 aa	Predicted RBP	7.38	□□□□□ -1.23
ECHDC1-223	ENST00000534442	RANGAP1	P46060	587 aa	Predicted RBP	7.38	□□□□□ -1.23
ECHDC1-223	ENST00000534442	SERPINB4	P48594	390 aa		7.38	□□□□□ -1.23
ECHDC1-223	ENST00000534442	ERVK-9	P63128	1117 aa		7.38	□□□□□ -1.23
ECHDC1-223	ENST00000534442	PRDM10	Q9NQV6	1147 aa		7.38	□□□□□ -1.23
ECHDC1-223	ENST00000534442	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.38	□□□□□ -1.23
ECHDC1-223	ENST00000534442	COL22A1	Q8NFW1	1626 aa	Predicted RBP	7.38	□□□□□ -1.23
ECHDC1-223	ENST00000534442	SLIT2	O94813	1529 aa		7.37	□□□□□ -1.23
ECHDC1-223	ENST00000534442	CD2BP2	O95400	341 aa	Known RBP	7.37	□□□□□ -1.23
ECHDC1-223	ENST00000534442	ARID5B	Q14865	1188 aa		7.37	□□□□□ -1.23
ECHDC1-223	ENST00000534442	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	7.37	□□□□□ -1.23
ECHDC1-223	ENST00000534442	TSEN2	Q8NCE0	465 aa	Known RBP	7.37	□□□□□ -1.23
ECHDC1-223	ENST00000534442	OSBPL3	Q9H4L5	887 aa		7.37	□□□□□ -1.23
ECHDC1-223	ENST00000534442	TMPRSS4	Q9NRS4	437 aa		7.37	□□□□□ -1.23
ECHDC1-223	ENST00000534442	RBM19	Q9Y4C8	960 aa	Known RBP	7.37	□□□□□ -1.23
ECHDC1-223	ENST00000534442	TMEM131L	A2VDJ0	1609 aa		7.37	□□□□□ -1.23
ECHDC1-223	ENST00000534442	SOWAHD	A6NJG2	315 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	TMEM229A	B2RXF0	380 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442		M0R2N6	131 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	FOXN1	O15353	648 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	STAU1	O95793	577 aa	Known RBP	7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	YBX3	P16989	372 aa	Known RBP eCLIP	7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	FSHR	P23945	695 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	WEE1	P30291	646 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	CC2D2B	Q6DHV5	1058 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	ZNF428	Q96B54	188 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	HINFP	Q9BQA5	517 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	ZNF358	Q9NW07	568 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	TLL2	Q9Y6L7	1015 aa		7.36	□□□□□ -1.23
ECHDC1-223	ENST00000534442	DHX57	Q6P158	1386 aa	Known RBP	7.35	□□□□□ -1.23
ECHDC1-223	ENST00000534442	GRIN3B	O60391	1043 aa		7.35	□□□□□ -1.23
ECHDC1-223	ENST00000534442	SCNN1D	P51172	638 aa		7.35	□□□□□ -1.23
ECHDC1-223	ENST00000534442	VPS72	Q15906	364 aa		7.35	□□□□□ -1.23
ECHDC1-223	ENST00000534442	PURB	Q96QR8	312 aa	Known RBP	7.35	□□□□□ -1.23
ECHDC1-223	ENST00000534442	CYLD	Q9NQC7	956 aa		7.35	□□□□□ -1.23
ECHDC1-223	ENST00000534442	ABCC5	O15440	1437 aa		7.35	□□□□□ -1.23
ECHDC1-223	ENST00000534442	MST1R	Q04912	1400 aa		7.35	□□□□□ -1.23
ECHDC1-223	ENST00000534442	CROCC2	H7BZ55	1655 aa		7.35	□□□□□ -1.23
ECHDC1-223	ENST00000534442	SPAG9	O60271	1321 aa	Known RBP	7.34	□□□□□ -1.23
ECHDC1-223	ENST00000534442	LILRA1	O75019	489 aa		7.34	□□□□□ -1.23
ECHDC1-223	ENST00000534442	GAS2L2	Q8NHY3	880 aa		7.34	□□□□□ -1.23

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