RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 TCIRG1Q13488 830 aa20.46■□□□□ 0.87
PAX6-230ENST00000534390 PRPF40BQ6NWY9 871 aaKnown RBP20.46■□□□□ 0.87
PAX6-230ENST00000534390 MYH16Q9H6N6 1097 aa20.46■□□□□ 0.87
PAX6-230ENST00000534390 ARFGEF2Q9Y6D5 1785 aa20.46■□□□□ 0.87
PAX6-230ENST00000534390 ATP5J2-PTCD1G3V325 749 aa20.45■□□□□ 0.86
PAX6-230ENST00000534390 NLRP10Q86W26 655 aa20.45■□□□□ 0.86
PAX6-230ENST00000534390 RPGRQ92834 1020 aaKnown RBP20.45■□□□□ 0.86
PAX6-230ENST00000534390 EXOSC9Q06265 439 aaKnown RBP20.44■□□□□ 0.86
PAX6-230ENST00000534390 C9orf131Q5VYM1 1079 aa20.44■□□□□ 0.86
PAX6-230ENST00000534390 SPINK5Q9NQ38 1064 aaPredicted RBP20.44■□□□□ 0.86
PAX6-230ENST00000534390 RNF181Q9P0P0 153 aa20.44■□□□□ 0.86
PAX6-230ENST00000534390 TRMT112Q9UI30 125 aaKnown RBP20.44■□□□□ 0.86
PAX6-230ENST00000534390 SLX4Q8IY92 1834 aa20.43■□□□□ 0.86
PAX6-230ENST00000534390 DDX58O95786 925 aaKnown RBP20.43■□□□□ 0.86
PAX6-230ENST00000534390 ADCY9O60503 1353 aa20.42■□□□□ 0.86
PAX6-230ENST00000534390 MYD88Q99836 296 aa20.41■□□□□ 0.86
PAX6-230ENST00000534390 KLRG2A4D1S0 409 aaPredicted RBP20.4■□□□□ 0.86
PAX6-230ENST00000534390 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
PAX6-230ENST00000534390 HCLS1P14317 486 aaPredicted RBP20.4■□□□□ 0.86
PAX6-230ENST00000534390 RTL5Q5HYW3 569 aaPredicted RBP20.4■□□□□ 0.86
PAX6-230ENST00000534390 MIER1Q8N108 512 aa20.4■□□□□ 0.86
PAX6-230ENST00000534390 SYNE4Q8N205 404 aa20.4■□□□□ 0.86
PAX6-230ENST00000534390 SH3TC1Q8TE82 1336 aa20.4■□□□□ 0.86
PAX6-230ENST00000534390 NLRP3Q96P20 1036 aa20.4■□□□□ 0.86
PAX6-230ENST00000534390 GPBP1L1Q9HC44 474 aaPredicted RBP20.4■□□□□ 0.86
PAX6-230ENST00000534390 RIC1Q4ADV7 1423 aa20.39■□□□□ 0.85
PAX6-230ENST00000534390 RNF123Q5XPI4 1314 aa20.39■□□□□ 0.85
PAX6-230ENST00000534390 ALDH1B1P30837 517 aa20.39■□□□□ 0.85
PAX6-230ENST00000534390 C3orf67Q6ZVT6 689 aa20.39■□□□□ 0.85
PAX6-230ENST00000534390 CRY2Q49AN0 593 aa20.38■□□□□ 0.85
PAX6-230ENST00000534390 SOGA3Q5TF21 947 aa20.38■□□□□ 0.85
PAX6-230ENST00000534390 RBM17Q96I25 401 aaKnown RBP20.38■□□□□ 0.85
PAX6-230ENST00000534390 ISCA1Q9BUE6 129 aa20.38■□□□□ 0.85
PAX6-230ENST00000534390 MAP3K2Q9Y2U5 619 aa20.38■□□□□ 0.85
PAX6-230ENST00000534390 NFKBIEO00221 500 aa20.37■□□□□ 0.85
PAX6-230ENST00000534390 LMNB1P20700 586 aa20.37■□□□□ 0.85
PAX6-230ENST00000534390 FAM89AQ96GI7 184 aa20.37■□□□□ 0.85
PAX6-230ENST00000534390 TAOK3Q9H2K8 898 aa20.37■□□□□ 0.85
PAX6-230ENST00000534390 SBF1O95248 1867 aa20.37■□□□□ 0.85
PAX6-230ENST00000534390 ZNF521Q96K83 1311 aa20.36■□□□□ 0.85
PAX6-230ENST00000534390 VAMP4O75379 141 aa20.36■□□□□ 0.85
PAX6-230ENST00000534390 CCDC93Q567U6 631 aa20.36■□□□□ 0.85
PAX6-230ENST00000534390 OLFM4Q6UX06 510 aa20.36■□□□□ 0.85
PAX6-230ENST00000534390 G2E3Q7L622 706 aa20.36■□□□□ 0.85
PAX6-230ENST00000534390 FER1L6Q2WGJ9 1857 aa20.35■□□□□ 0.85
PAX6-230ENST00000534390 CCDC88AQ3V6T2 1871 aa20.35■□□□□ 0.85
PAX6-230ENST00000534390 PI4KAP2A4QPH2 592 aa20.35■□□□□ 0.85
PAX6-230ENST00000534390 FKBP5Q13451 457 aaPredicted RBP20.35■□□□□ 0.85
PAX6-230ENST00000534390 KSR2Q6VAB6 950 aa20.35■□□□□ 0.85
PAX6-230ENST00000534390 PI4KAP1Q8N8J0 262 aa20.35■□□□□ 0.85
PAX6-230ENST00000534390 METTL22Q9BUU2 404 aaPredicted RBP20.35■□□□□ 0.85
PAX6-230ENST00000534390 LAMB2P55268 1798 aa20.35■□□□□ 0.85
PAX6-230ENST00000534390 TIAM2Q8IVF5 1701 aa20.34■□□□□ 0.85
PAX6-230ENST00000534390 NEXNQ0ZGT2 675 aa20.34■□□□□ 0.85
PAX6-230ENST00000534390 FLIIQ13045 1269 aa20.34■□□□□ 0.85
PAX6-230ENST00000534390 SLC10A5Q5PT55 438 aa20.34■□□□□ 0.85
PAX6-230ENST00000534390 E9PSI1 815 aa20.33■□□□□ 0.85
PAX6-230ENST00000534390 PPEF1O14829 653 aaPredicted RBP20.33■□□□□ 0.85
PAX6-230ENST00000534390 CWC25Q9NXE8 425 aaPredicted RBP20.33■□□□□ 0.85
PAX6-230ENST00000534390 DDX60Q8IY21 1712 aaKnown RBP20.33■□□□□ 0.84
PAX6-230ENST00000534390 IRS4O14654 1257 aaPredicted RBP20.32■□□□□ 0.84
PAX6-230ENST00000534390 HOXA10P31260 410 aaPredicted RBP20.32■□□□□ 0.84
PAX6-230ENST00000534390 PRELPP51888 382 aa20.32■□□□□ 0.84
PAX6-230ENST00000534390 TRIM28Q13263 835 aaKnown RBP20.32■□□□□ 0.84
PAX6-230ENST00000534390 DDX46Q7L014 1031 aaKnown RBP20.32■□□□□ 0.84
PAX6-230ENST00000534390 JARID2Q92833 1246 aaPredicted RBP20.32■□□□□ 0.84
PAX6-230ENST00000534390 CRAMP1Q96RY5 1269 aa20.32■□□□□ 0.84
PAX6-230ENST00000534390 TMX4Q9H1E5 349 aaPredicted RBP20.32■□□□□ 0.84
PAX6-230ENST00000534390 ABCC4O15439 1325 aa20.31■□□□□ 0.84
PAX6-230ENST00000534390 CCDC191Q8NCU4 936 aa20.31■□□□□ 0.84
PAX6-230ENST00000534390 C7orf43Q8WVR3 580 aa20.31■□□□□ 0.84
PAX6-230ENST00000534390 CACNA1FO60840 1977 aa20.3■□□□□ 0.84
PAX6-230ENST00000534390 RTKN2Q8IZC4 609 aa20.3■□□□□ 0.84
PAX6-230ENST00000534390 ZBTB38Q8NAP3 1195 aaPredicted RBP20.3■□□□□ 0.84
PAX6-230ENST00000534390 CDCA7LQ96GN5 454 aa20.3■□□□□ 0.84
PAX6-230ENST00000534390 LTBP3Q9NS15 1303 aa20.29■□□□□ 0.84
PAX6-230ENST00000534390 FKBP4Q02790 459 aaKnown RBP eCLIP20.29■□□□□ 0.84
PAX6-230ENST00000534390 CWF19L2Q2TBE0 894 aaKnown RBP20.29■□□□□ 0.84
PAX6-230ENST00000534390 SLC51AQ86UW1 340 aa20.29■□□□□ 0.84
PAX6-230ENST00000534390 ZNF277Q9NRM2 450 aaPredicted RBP20.29■□□□□ 0.84
PAX6-230ENST00000534390 KDM2BQ8NHM5 1336 aa20.28■□□□□ 0.84
PAX6-230ENST00000534390 SLFN5Q08AF3 891 aa20.28■□□□□ 0.84
PAX6-230ENST00000534390 PCCAP05165 728 aaPredicted RBP20.27■□□□□ 0.84
PAX6-230ENST00000534390 IGKV5-2P06315 115 aa20.27■□□□□ 0.84
PAX6-230ENST00000534390 HSP90B1P14625 803 aaKnown RBP20.27■□□□□ 0.84
PAX6-230ENST00000534390 DNAAF4Q8WXU2 420 aa20.27■□□□□ 0.84
PAX6-230ENST00000534390 NMRK2Q9NPI5 230 aa20.27■□□□□ 0.84
PAX6-230ENST00000534390 TAF1P21675 1872 aa20.26■□□□□ 0.83
PAX6-230ENST00000534390 NEURL1BA8MQ27 555 aa20.26■□□□□ 0.83
PAX6-230ENST00000534390 F6X3S4 739 aa20.26■□□□□ 0.83
PAX6-230ENST00000534390 GRAPQ13588 217 aa20.26■□□□□ 0.83
PAX6-230ENST00000534390 CC2D2BQ6DHV5 1058 aa20.26■□□□□ 0.83
PAX6-230ENST00000534390 GRAPLQ8TC17 118 aaPredicted RBP20.26■□□□□ 0.83
PAX6-230ENST00000534390 CCDC85AQ96PX6 553 aaPredicted RBP20.26■□□□□ 0.83
PAX6-230ENST00000534390 ZC3H4Q9UPT8 1303 aaKnown RBP20.26■□□□□ 0.83
PAX6-230ENST00000534390 DICER1Q9UPY3 1922 aaKnown RBP20.25■□□□□ 0.83
PAX6-230ENST00000534390 BBOX1O75936 387 aa20.24■□□□□ 0.83
PAX6-230ENST00000534390 UBE3BQ7Z3V4 1068 aa20.24■□□□□ 0.83
PAX6-230ENST00000534390 ATP6V0A2Q9Y487 856 aa20.24■□□□□ 0.83
PAX6-230ENST00000534390 PDE8AO60658 829 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms