RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 GPTP24298 496 aa18.32■□□□□ 0.52
SF3B2-215ENST00000534307 SUSD4Q5VX71 490 aa18.32■□□□□ 0.52
SF3B2-215ENST00000534307 NUTM1Q86Y26 1132 aa18.32■□□□□ 0.52
SF3B2-215ENST00000534307 VEGFAP15692 232 aaPredicted RBP18.31■□□□□ 0.52
SF3B2-215ENST00000534307 ERFEQ4G0M1 354 aa18.31■□□□□ 0.52
SF3B2-215ENST00000534307 COPS6Q7L5N1 327 aa18.31■□□□□ 0.52
SF3B2-215ENST00000534307 XAGE3Q8WTP9 111 aa18.31■□□□□ 0.52
SF3B2-215ENST00000534307 CHPF2Q9P2E5 772 aa18.31■□□□□ 0.52
SF3B2-215ENST00000534307 CALD1Q05682 793 aaKnown RBP18.3■□□□□ 0.52
SF3B2-215ENST00000534307 HDGFL1Q5TGJ6 251 aa18.3■□□□□ 0.52
SF3B2-215ENST00000534307 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
SF3B2-215ENST00000534307 GTF2E1P29083 439 aaPredicted RBP18.29■□□□□ 0.52
SF3B2-215ENST00000534307 GNAI1P63096 354 aa18.29■□□□□ 0.52
SF3B2-215ENST00000534307 PARP10Q53GL7 1025 aa18.29■□□□□ 0.52
SF3B2-215ENST00000534307 SOGA3Q5TF21 947 aa18.29■□□□□ 0.52
SF3B2-215ENST00000534307 DUSP27Q5VZP5 1158 aa18.29■□□□□ 0.52
SF3B2-215ENST00000534307 SNED1Q8TER0 1413 aa18.29■□□□□ 0.52
SF3B2-215ENST00000534307 POTECB2RU33 542 aa18.28■□□□□ 0.52
SF3B2-215ENST00000534307 ANP32CO43423 234 aa18.28■□□□□ 0.52
SF3B2-215ENST00000534307 HOXA10P31260 410 aaPredicted RBP18.28■□□□□ 0.52
SF3B2-215ENST00000534307 CCDC27Q2M243 656 aa18.28■□□□□ 0.52
SF3B2-215ENST00000534307 TAOK3Q9H2K8 898 aa18.28■□□□□ 0.52
SF3B2-215ENST00000534307 AIMP1Q12904 312 aaKnown RBP18.27■□□□□ 0.52
SF3B2-215ENST00000534307 PPP1R42Q7Z4L9 355 aa18.27■□□□□ 0.52
SF3B2-215ENST00000534307 MRS2Q9HD23 443 aa18.27■□□□□ 0.52
SF3B2-215ENST00000534307 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
SF3B2-215ENST00000534307 ALDH1B1P30837 517 aa18.26■□□□□ 0.51
SF3B2-215ENST00000534307 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
SF3B2-215ENST00000534307 HSP90AB3PQ58FF7 597 aa18.26■□□□□ 0.51
SF3B2-215ENST00000534307 C3orf67Q6ZVT6 689 aa18.26■□□□□ 0.51
SF3B2-215ENST00000534307 NLRP10Q86W26 655 aa18.26■□□□□ 0.51
SF3B2-215ENST00000534307 RNF123Q5XPI4 1314 aa18.25■□□□□ 0.51
SF3B2-215ENST00000534307 SLC34A2O95436 690 aa18.25■□□□□ 0.51
SF3B2-215ENST00000534307 TCIRG1Q13488 830 aa18.25■□□□□ 0.51
SF3B2-215ENST00000534307 CCDC93Q567U6 631 aa18.25■□□□□ 0.51
SF3B2-215ENST00000534307 SLC10A5Q5PT55 438 aa18.25■□□□□ 0.51
SF3B2-215ENST00000534307 OLFM4Q6UX06 510 aa18.25■□□□□ 0.51
SF3B2-215ENST00000534307 UTP14AQ9BVJ6 771 aaKnown RBP18.25■□□□□ 0.51
SF3B2-215ENST00000534307 LAMB2P55268 1798 aa18.25■□□□□ 0.51
SF3B2-215ENST00000534307 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
SF3B2-215ENST00000534307 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
SF3B2-215ENST00000534307 PLBD2Q8NHP8 589 aa18.24■□□□□ 0.51
SF3B2-215ENST00000534307 HYPKQ9NX55 129 aa18.24■□□□□ 0.51
SF3B2-215ENST00000534307 ANKRD13DQ6ZTN6 518 aa18.23■□□□□ 0.51
SF3B2-215ENST00000534307 MKRN1Q9UHC7 482 aaKnown RBP18.23■□□□□ 0.51
SF3B2-215ENST00000534307 SCN4AP35499 1836 aa18.23■□□□□ 0.51
SF3B2-215ENST00000534307 FOXN1O15353 648 aa18.22■□□□□ 0.51
SF3B2-215ENST00000534307 FKBP4Q02790 459 aaKnown RBP eCLIP18.22■□□□□ 0.51
SF3B2-215ENST00000534307 CRAMP1Q96RY5 1269 aa18.22■□□□□ 0.51
SF3B2-215ENST00000534307 ISCA1Q9BUE6 129 aa18.22■□□□□ 0.51
SF3B2-215ENST00000534307 CREBZFQ9NS37 354 aa18.22■□□□□ 0.51
SF3B2-215ENST00000534307 ELL2O00472 640 aaPredicted RBP18.21■□□□□ 0.51
SF3B2-215ENST00000534307 RTKN2Q8IZC4 609 aa18.21■□□□□ 0.51
SF3B2-215ENST00000534307 SYNE4Q8N205 404 aa18.21■□□□□ 0.51
SF3B2-215ENST00000534307 RPGRQ92834 1020 aaKnown RBP18.21■□□□□ 0.51
SF3B2-215ENST00000534307 IL16Q14005 1332 aa18.21■□□□□ 0.51
SF3B2-215ENST00000534307 DDX60Q8IY21 1712 aaKnown RBP18.2■□□□□ 0.5
SF3B2-215ENST00000534307 CNTNAP1P78357 1384 aa18.2■□□□□ 0.5
SF3B2-215ENST00000534307 TSPYL6Q8N831 410 aa18.2■□□□□ 0.5
SF3B2-215ENST00000534307 TSR2Q969E8 191 aaKnown RBP18.2■□□□□ 0.5
SF3B2-215ENST00000534307 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
SF3B2-215ENST00000534307 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
SF3B2-215ENST00000534307 POTEJP0CG39 1038 aa18.19■□□□□ 0.5
SF3B2-215ENST00000534307 CC2D2BQ6DHV5 1058 aa18.19■□□□□ 0.5
SF3B2-215ENST00000534307 SLC51AQ86UW1 340 aa18.19■□□□□ 0.5
SF3B2-215ENST00000534307 RBM17Q96I25 401 aaKnown RBP18.19■□□□□ 0.5
SF3B2-215ENST00000534307 PSMD1Q99460 953 aa18.19■□□□□ 0.5
SF3B2-215ENST00000534307 PHAXQ9H814 394 aaKnown RBP18.19■□□□□ 0.5
SF3B2-215ENST00000534307 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
SF3B2-215ENST00000534307 TRMT112Q9UI30 125 aaKnown RBP18.19■□□□□ 0.5
SF3B2-215ENST00000534307 SH3TC1Q8TE82 1336 aa18.19■□□□□ 0.5
SF3B2-215ENST00000534307 ADAMTSL1Q8N6G6 1762 aa18.18■□□□□ 0.5
SF3B2-215ENST00000534307 TRIM28Q13263 835 aaKnown RBP18.18■□□□□ 0.5
SF3B2-215ENST00000534307 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
SF3B2-215ENST00000534307 ABCC4O15439 1325 aa18.18■□□□□ 0.5
SF3B2-215ENST00000534307 HCLS1P14317 486 aaPredicted RBP18.17■□□□□ 0.5
SF3B2-215ENST00000534307 CHADLQ6NUI6 762 aa18.17■□□□□ 0.5
SF3B2-215ENST00000534307 DPY19L2Q6NUT2 758 aa18.17■□□□□ 0.5
SF3B2-215ENST00000534307 COL4A5P29400 1685 aa18.17■□□□□ 0.5
SF3B2-215ENST00000534307 ATP5J2-PTCD1G3V325 749 aa18.16■□□□□ 0.5
SF3B2-215ENST00000534307 PPEF1O14829 653 aaPredicted RBP18.16■□□□□ 0.5
SF3B2-215ENST00000534307 CCDC30Q5VVM6 783 aa18.16■□□□□ 0.5
SF3B2-215ENST00000534307 IARSP41252 1262 aaKnown RBP18.15■□□□□ 0.5
SF3B2-215ENST00000534307 GOLGA2Q08379 1002 aa18.15■□□□□ 0.5
SF3B2-215ENST00000534307 GRIPAP1Q4V328 841 aa18.15■□□□□ 0.5
SF3B2-215ENST00000534307 CHMP4AQ9BY43 222 aa18.15■□□□□ 0.5
SF3B2-215ENST00000534307 PASKQ96RG2 1323 aa18.15■□□□□ 0.5
SF3B2-215ENST00000534307 TNRC18O15417 2968 aaPredicted RBP18.14■□□□□ 0.49
SF3B2-215ENST00000534307 DDNO94850 711 aaPredicted RBP18.14■□□□□ 0.49
SF3B2-215ENST00000534307 ZNF428Q96B54 188 aa18.14■□□□□ 0.49
SF3B2-215ENST00000534307 FAM89AQ96GI7 184 aa18.14■□□□□ 0.49
SF3B2-215ENST00000534307 ATP6V0A2Q9Y487 856 aa18.14■□□□□ 0.49
SF3B2-215ENST00000534307 FANCIQ9NVI1 1328 aa18.14■□□□□ 0.49
SF3B2-215ENST00000534307 TAF1P21675 1872 aa18.14■□□□□ 0.49
SF3B2-215ENST00000534307 THSD7BQ9C0I4 1608 aa18.13■□□□□ 0.49
SF3B2-215ENST00000534307 LRRC37AA6NMS7 1700 aa18.13■□□□□ 0.49
SF3B2-215ENST00000534307 FZD9O00144 591 aa18.13■□□□□ 0.49
SF3B2-215ENST00000534307 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
SF3B2-215ENST00000534307 RIC3Q7Z5B4 369 aa18.13■□□□□ 0.49
SF3B2-215ENST00000534307 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms