RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 HSP90AB3PQ58FF7 597 aa11.61□□□□□ -0.55
COPB1-211ENST00000534234 SLC10A5Q5PT55 438 aa11.61□□□□□ -0.55
COPB1-211ENST00000534234 CC2D2BQ6DHV5 1058 aa11.61□□□□□ -0.55
COPB1-211ENST00000534234 SYNE4Q8N205 404 aa11.61□□□□□ -0.55
COPB1-211ENST00000534234 RBM17Q96I25 401 aaKnown RBP11.61□□□□□ -0.55
COPB1-211ENST00000534234 COL11A2P13942 1736 aaPredicted RBP11.6□□□□□ -0.55
COPB1-211ENST00000534234 HOXB7P09629 217 aa11.6□□□□□ -0.55
COPB1-211ENST00000534234 TCIRG1Q13488 830 aa11.6□□□□□ -0.55
COPB1-211ENST00000534234 HDGFL1Q5TGJ6 251 aa11.6□□□□□ -0.55
COPB1-211ENST00000534234 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
COPB1-211ENST00000534234 CRAMP1Q96RY5 1269 aa11.6□□□□□ -0.55
COPB1-211ENST00000534234 CHPF2Q9P2E5 772 aa11.6□□□□□ -0.55
COPB1-211ENST00000534234 SBF1O95248 1867 aa11.6□□□□□ -0.55
COPB1-211ENST00000534234 SLX4Q8IY92 1834 aa11.59□□□□□ -0.55
COPB1-211ENST00000534234 TCERG1O14776 1098 aaKnown RBP11.59□□□□□ -0.55
COPB1-211ENST00000534234 IARSP41252 1262 aaKnown RBP11.59□□□□□ -0.55
COPB1-211ENST00000534234 DUSP27Q5VZP5 1158 aa11.59□□□□□ -0.55
COPB1-211ENST00000534234 NLRP10Q86W26 655 aa11.59□□□□□ -0.55
COPB1-211ENST00000534234 PSMD1Q99460 953 aa11.59□□□□□ -0.55
COPB1-211ENST00000534234 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
COPB1-211ENST00000534234 DBF4Q9UBU7 674 aaPredicted RBP11.59□□□□□ -0.55
COPB1-211ENST00000534234 TRMT112Q9UI30 125 aaKnown RBP11.59□□□□□ -0.55
COPB1-211ENST00000534234 GRIPAP1Q4V328 841 aa11.58□□□□□ -0.55
COPB1-211ENST00000534234 ANKRD13DQ6ZTN6 518 aa11.58□□□□□ -0.55
COPB1-211ENST00000534234 JDP2Q8WYK2 163 aa11.58□□□□□ -0.55
COPB1-211ENST00000534234 LAMB4A4D0S4 1761 aa11.58□□□□□ -0.56
COPB1-211ENST00000534234 RIC1Q4ADV7 1423 aa11.58□□□□□ -0.56
COPB1-211ENST00000534234 IQCA1LA6NCM1 817 aa11.58□□□□□ -0.56
COPB1-211ENST00000534234 FZD9O00144 591 aa11.58□□□□□ -0.56
COPB1-211ENST00000534234 ZNF853P0CG23 659 aa11.58□□□□□ -0.56
COPB1-211ENST00000534234 HCLS1P14317 486 aaPredicted RBP11.58□□□□□ -0.56
COPB1-211ENST00000534234 ZEB1P37275 1124 aaPredicted RBP11.58□□□□□ -0.56
COPB1-211ENST00000534234 GNAI1P63096 354 aa11.58□□□□□ -0.56
COPB1-211ENST00000534234 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.56
COPB1-211ENST00000534234 PLBD2Q8NHP8 589 aa11.58□□□□□ -0.56
COPB1-211ENST00000534234 KLRG1Q96E93 195 aa11.58□□□□□ -0.56
COPB1-211ENST00000534234 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
COPB1-211ENST00000534234 TMX4Q9H1E5 349 aaPredicted RBP11.58□□□□□ -0.56
COPB1-211ENST00000534234 ELL2O00472 640 aaPredicted RBP11.57□□□□□ -0.56
COPB1-211ENST00000534234 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
COPB1-211ENST00000534234 POTEIP0CG38 1075 aa11.57□□□□□ -0.56
COPB1-211ENST00000534234 POTEJP0CG39 1038 aa11.57□□□□□ -0.56
COPB1-211ENST00000534234 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
COPB1-211ENST00000534234 CNKSR2Q8WXI2 1034 aa11.57□□□□□ -0.56
COPB1-211ENST00000534234 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
COPB1-211ENST00000534234 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
COPB1-211ENST00000534234 HYPKQ9NX55 129 aa11.57□□□□□ -0.56
COPB1-211ENST00000534234 RNF123Q5XPI4 1314 aa11.57□□□□□ -0.56
COPB1-211ENST00000534234 ZNF541Q9H0D2 1346 aa11.57□□□□□ -0.56
COPB1-211ENST00000534234 CCDC184Q52MB2 194 aa11.56□□□□□ -0.56
COPB1-211ENST00000534234 SH3TC1Q8TE82 1336 aa11.56□□□□□ -0.56
COPB1-211ENST00000534234 TAF1DQ9H5J8 278 aaPredicted RBP11.56□□□□□ -0.56
COPB1-211ENST00000534234 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
COPB1-211ENST00000534234 FER1L6Q2WGJ9 1857 aa11.55□□□□□ -0.56
COPB1-211ENST00000534234 ATP5J2-PTCD1G3V325 749 aa11.55□□□□□ -0.56
COPB1-211ENST00000534234 BBOX1O75936 387 aa11.55□□□□□ -0.56
COPB1-211ENST00000534234 SLC51AQ86UW1 340 aa11.55□□□□□ -0.56
COPB1-211ENST00000534234 LARGE2Q8N3Y3 721 aa11.55□□□□□ -0.56
COPB1-211ENST00000534234 HACL1Q9UJ83 578 aa11.55□□□□□ -0.56
COPB1-211ENST00000534234 ATP6V0A2Q9Y487 856 aa11.55□□□□□ -0.56
COPB1-211ENST00000534234 SNED1Q8TER0 1413 aa11.55□□□□□ -0.56
COPB1-211ENST00000534234 ABCC4O15439 1325 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 EIF6P56537 245 aaKnown RBP11.54□□□□□ -0.56
COPB1-211ENST00000534234 DDX46Q7L014 1031 aaKnown RBP11.54□□□□□ -0.56
COPB1-211ENST00000534234 GPC2Q8N158 579 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 WDR90Q96KV7 1748 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 EAPPQ56P03 285 aaPredicted RBP11.54□□□□□ -0.56
COPB1-211ENST00000534234 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 LDHDQ86WU2 507 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 SP8Q8IXZ3 490 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 JMYQ8N9B5 988 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 C8orf58Q8NAV2 365 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 FAM89AQ96GI7 184 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 PHAXQ9H814 394 aaKnown RBP11.54□□□□□ -0.56
COPB1-211ENST00000534234 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 GJA3Q9Y6H8 435 aa11.54□□□□□ -0.56
COPB1-211ENST00000534234 NUP98P52948 1817 aa11.53□□□□□ -0.56
COPB1-211ENST00000534234 TIAM2Q8IVF5 1701 aa11.53□□□□□ -0.56
COPB1-211ENST00000534234 EPHX2P34913 555 aa11.53□□□□□ -0.56
COPB1-211ENST00000534234 TRIM28Q13263 835 aaKnown RBP11.53□□□□□ -0.56
COPB1-211ENST00000534234 PNMA8AQ86V59 439 aaPredicted RBP11.53□□□□□ -0.56
COPB1-211ENST00000534234 PPIP5K2O43314 1243 aa11.52□□□□□ -0.57
COPB1-211ENST00000534234 GRAPQ13588 217 aa11.52□□□□□ -0.57
COPB1-211ENST00000534234 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
COPB1-211ENST00000534234 DPP8Q6V1X1 898 aaPredicted RBP11.52□□□□□ -0.57
COPB1-211ENST00000534234 NIM1KQ8IY84 436 aa11.52□□□□□ -0.57
COPB1-211ENST00000534234 MPNDQ8N594 471 aa11.52□□□□□ -0.57
COPB1-211ENST00000534234 SUPT20HQ8NEM7 779 aa11.52□□□□□ -0.57
COPB1-211ENST00000534234 GRAPLQ8TC17 118 aaPredicted RBP11.52□□□□□ -0.57
COPB1-211ENST00000534234 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.57
COPB1-211ENST00000534234 VPS33BQ9H267 617 aa11.52□□□□□ -0.57
COPB1-211ENST00000534234 ARFGEF2Q9Y6D5 1785 aa11.51□□□□□ -0.57
COPB1-211ENST00000534234 ZNF316A6NFI3 1004 aaPredicted RBP11.51□□□□□ -0.57
COPB1-211ENST00000534234 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
COPB1-211ENST00000534234 SF3B3Q15393 1217 aaKnown RBP11.51□□□□□ -0.57
COPB1-211ENST00000534234 AOC3Q16853 763 aa11.51□□□□□ -0.57
COPB1-211ENST00000534234 CCDC30Q5VVM6 783 aa11.51□□□□□ -0.57
COPB1-211ENST00000534234 RTFDC1Q9BY42 306 aaPredicted RBP11.51□□□□□ -0.57
COPB1-211ENST00000534234 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms