RNA–Protein interactions for RNA: ENST00000534227.5

NCAPD3-211, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 4

Gene NCAPD3, Length 537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-211ENST00000534227 ABCC12Q96J65 1359 aa28.59■■■□□ 2.17
NCAPD3-211ENST00000534227 SLX4Q8IY92 1834 aa28.58■■■□□ 2.17
NCAPD3-211ENST00000534227 DDX58O95786 925 aaKnown RBP28.58■■■□□ 2.17
NCAPD3-211ENST00000534227 SLFN5Q08AF3 891 aa28.58■■■□□ 2.17
NCAPD3-211ENST00000534227 STYK1Q6J9G0 422 aa28.58■■■□□ 2.17
NCAPD3-211ENST00000534227 RIC3Q7Z5B4 369 aa28.58■■■□□ 2.17
NCAPD3-211ENST00000534227 SLC4A2P04920 1241 aa28.57■■■□□ 2.16
NCAPD3-211ENST00000534227 TRIM28Q13263 835 aaKnown RBP28.57■■■□□ 2.16
NCAPD3-211ENST00000534227 ZNF622Q969S3 477 aaKnown RBP eCLIP28.57■■■□□ 2.16
NCAPD3-211ENST00000534227 MASTLQ96GX5 879 aa28.57■■■□□ 2.16
NCAPD3-211ENST00000534227 LAMB2P55268 1798 aa28.57■■■□□ 2.16
NCAPD3-211ENST00000534227 SBF1O95248 1867 aa28.57■■■□□ 2.16
NCAPD3-211ENST00000534227 TCERG1O14776 1098 aaKnown RBP28.56■■■□□ 2.16
NCAPD3-211ENST00000534227 SLC10A5Q5PT55 438 aa28.55■■■□□ 2.16
NCAPD3-211ENST00000534227 CNKSR1Q969H4 720 aa28.55■■■□□ 2.16
NCAPD3-211ENST00000534227 NPR1P16066 1061 aa28.54■■■□□ 2.16
NCAPD3-211ENST00000534227 DDX60Q8IY21 1712 aaKnown RBP28.53■■■□□ 2.16
NCAPD3-211ENST00000534227 CRY2Q49AN0 593 aa28.53■■■□□ 2.16
NCAPD3-211ENST00000534227 KSR2Q6VAB6 950 aa28.53■■■□□ 2.16
NCAPD3-211ENST00000534227 G2E3Q7L622 706 aa28.53■■■□□ 2.16
NCAPD3-211ENST00000534227 FER1L6Q2WGJ9 1857 aa28.53■■■□□ 2.16
NCAPD3-211ENST00000534227 CCDC88AQ3V6T2 1871 aa28.53■■■□□ 2.16
NCAPD3-211ENST00000534227 ARHGAP27Q6ZUM4 889 aa28.52■■■□□ 2.16
NCAPD3-211ENST00000534227 TRMT2AQ8IZ69 625 aaKnown RBP28.52■■■□□ 2.16
NCAPD3-211ENST00000534227 METTL22Q9BUU2 404 aaPredicted RBP28.52■■■□□ 2.16
NCAPD3-211ENST00000534227 ATP5J2-PTCD1G3V325 749 aa28.51■■■□□ 2.15
NCAPD3-211ENST00000534227 CDCA7LQ96GN5 454 aa28.51■■■□□ 2.15
NCAPD3-211ENST00000534227 TRMT112Q9UI30 125 aaKnown RBP28.51■■■□□ 2.15
NCAPD3-211ENST00000534227 ADCY9O60503 1353 aa28.5■■■□□ 2.15
NCAPD3-211ENST00000534227 SH3TC1Q8TE82 1336 aa28.5■■■□□ 2.15
NCAPD3-211ENST00000534227 FLIIQ13045 1269 aa28.5■■■□□ 2.15
NCAPD3-211ENST00000534227 PI4KAP2A4QPH2 592 aa28.49■■■□□ 2.15
NCAPD3-211ENST00000534227 PI4KAP1Q8N8J0 262 aa28.49■■■□□ 2.15
NCAPD3-211ENST00000534227 NLRP3Q96P20 1036 aa28.49■■■□□ 2.15
NCAPD3-211ENST00000534227 MYD88Q99836 296 aa28.49■■■□□ 2.15
NCAPD3-211ENST00000534227 MAP3K2Q9Y2U5 619 aa28.49■■■□□ 2.15
NCAPD3-211ENST00000534227 ALDH1B1P30837 517 aa28.47■■■□□ 2.15
NCAPD3-211ENST00000534227 HOXA10P31260 410 aaPredicted RBP28.47■■■□□ 2.15
NCAPD3-211ENST00000534227 PRPF40BQ6NWY9 871 aaKnown RBP28.47■■■□□ 2.15
NCAPD3-211ENST00000534227 CCDC191Q8NCU4 936 aa28.47■■■□□ 2.15
NCAPD3-211ENST00000534227 FKBP5Q13451 457 aaPredicted RBP28.45■■■□□ 2.14
NCAPD3-211ENST00000534227 SYNE4Q8N205 404 aa28.45■■■□□ 2.14
NCAPD3-211ENST00000534227 RPGRQ92834 1020 aaKnown RBP28.45■■■□□ 2.14
NCAPD3-211ENST00000534227 ZNF428Q96B54 188 aa28.45■■■□□ 2.14
NCAPD3-211ENST00000534227 DICER1Q9UPY3 1922 aaKnown RBP28.45■■■□□ 2.14
NCAPD3-211ENST00000534227 NEXNQ0ZGT2 675 aa28.44■■■□□ 2.14
NCAPD3-211ENST00000534227 MYH3P11055 1940 aa28.43■■■□□ 2.14
NCAPD3-211ENST00000534227 C21orf2O43822 256 aa28.43■■■□□ 2.14
NCAPD3-211ENST00000534227 SOGA3Q5TF21 947 aa28.43■■■□□ 2.14
NCAPD3-211ENST00000534227 C3orf67Q6ZVT6 689 aa28.43■■■□□ 2.14
NCAPD3-211ENST00000534227 ZNF784Q8NCA9 323 aaPredicted RBP28.43■■■□□ 2.14
NCAPD3-211ENST00000534227 FAM89AQ96GI7 184 aa28.43■■■□□ 2.14
NCAPD3-211ENST00000534227 CRAMP1Q96RY5 1269 aa28.43■■■□□ 2.14
NCAPD3-211ENST00000534227 CWC25Q9NXE8 425 aaPredicted RBP28.43■■■□□ 2.14
NCAPD3-211ENST00000534227 HCLS1P14317 486 aaPredicted RBP28.42■■■□□ 2.14
NCAPD3-211ENST00000534227 ZBTB38Q8NAP3 1195 aaPredicted RBP28.42■■■□□ 2.14
NCAPD3-211ENST00000534227 C7orf43Q8WVR3 580 aa28.42■■■□□ 2.14
NCAPD3-211ENST00000534227 RBM17Q96I25 401 aaKnown RBP28.42■■■□□ 2.14
NCAPD3-211ENST00000534227 TAF1P21675 1872 aa28.41■■■□□ 2.14
NCAPD3-211ENST00000534227 IGKV5-2P06315 115 aa28.41■■■□□ 2.14
NCAPD3-211ENST00000534227 CT47B1P0C2W7 299 aaPredicted RBP28.41■■■□□ 2.14
NCAPD3-211ENST00000534227 HNRNPUQ00839 825 aaKnown RBP eCLIP28.41■■■□□ 2.14
NCAPD3-211ENST00000534227 DNAAF4Q8WXU2 420 aa28.41■■■□□ 2.14
NCAPD3-211ENST00000534227 PCCAP05165 728 aaPredicted RBP28.4■■■□□ 2.14
NCAPD3-211ENST00000534227 HSP90B1P14625 803 aaKnown RBP28.39■■■□□ 2.14
NCAPD3-211ENST00000534227 ZNF219Q9P2Y4 722 aaPredicted RBP28.39■■■□□ 2.14
NCAPD3-211ENST00000534227 NEURL1BA8MQ27 555 aa28.38■■■□□ 2.13
NCAPD3-211ENST00000534227 IRS4O14654 1257 aaPredicted RBP28.38■■■□□ 2.13
NCAPD3-211ENST00000534227 LTBP3Q9NS15 1303 aa28.38■■■□□ 2.13
NCAPD3-211ENST00000534227 NFKBIEO00221 500 aa28.37■■■□□ 2.13
NCAPD3-211ENST00000534227 SF3B3Q15393 1217 aaKnown RBP28.37■■■□□ 2.13
NCAPD3-211ENST00000534227 ALDH1L2Q3SY69 923 aa28.37■■■□□ 2.13
NCAPD3-211ENST00000534227 MRPL50Q8N5N7 158 aaKnown RBP28.37■■■□□ 2.13
NCAPD3-211ENST00000534227 RASSF7Q02833 373 aa28.36■■■□□ 2.13
NCAPD3-211ENST00000534227 CCDC93Q567U6 631 aa28.36■■■□□ 2.13
NCAPD3-211ENST00000534227 C9orf131Q5VYM1 1079 aa28.36■■■□□ 2.13
NCAPD3-211ENST00000534227 CDHR2Q9BYE9 1310 aa28.36■■■□□ 2.13
NCAPD3-211ENST00000534227 CWF19L2Q2TBE0 894 aaKnown RBP28.35■■■□□ 2.13
NCAPD3-211ENST00000534227 RTL5Q5HYW3 569 aaPredicted RBP28.35■■■□□ 2.13
NCAPD3-211ENST00000534227 LINS1Q8NG48 757 aa28.35■■■□□ 2.13
NCAPD3-211ENST00000534227 SSH1Q8WYL5 1049 aa28.35■■■□□ 2.13
NCAPD3-211ENST00000534227 LMNB1P20700 586 aa28.34■■■□□ 2.13
NCAPD3-211ENST00000534227 CC2D2BQ6DHV5 1058 aa28.34■■■□□ 2.13
NCAPD3-211ENST00000534227 ABCC4O15439 1325 aa28.34■■■□□ 2.13
NCAPD3-211ENST00000534227 TIAM2Q8IVF5 1701 aa28.33■■■□□ 2.13
NCAPD3-211ENST00000534227 DDX46Q7L014 1031 aaKnown RBP28.33■■■□□ 2.13
NCAPD3-211ENST00000534227 TAOK3Q9H2K8 898 aa28.33■■■□□ 2.13
NCAPD3-211ENST00000534227 SNED1Q8TER0 1413 aa28.33■■■□□ 2.13
NCAPD3-211ENST00000534227 F6X3S4 739 aa28.32■■■□□ 2.12
NCAPD3-211ENST00000534227 GCKRQ14397 625 aa28.32■■■□□ 2.12
NCAPD3-211ENST00000534227 RTKN2Q8IZC4 609 aa28.32■■■□□ 2.12
NCAPD3-211ENST00000534227 RNF181Q9P0P0 153 aa28.32■■■□□ 2.12
NCAPD3-211ENST00000534227 ZBED9Q6R2W3 1325 aa28.32■■■□□ 2.12
NCAPD3-211ENST00000534227 H7C1W4 665 aa28.31■■■□□ 2.12
NCAPD3-211ENST00000534227 PDE8AO60658 829 aa28.31■■■□□ 2.12
NCAPD3-211ENST00000534227 BBOX1O75936 387 aa28.31■■■□□ 2.12
NCAPD3-211ENST00000534227 PRELPP51888 382 aa28.31■■■□□ 2.12
NCAPD3-211ENST00000534227 GRIPAP1Q4V328 841 aa28.31■■■□□ 2.12
NCAPD3-211ENST00000534227 PTPRCP08575 1304 aa28.31■■■□□ 2.12
NCAPD3-211ENST00000534227 ZC3H4Q9UPT8 1303 aaKnown RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms