RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 C21orf2O43822 256 aa19.91■□□□□ 0.78
UBXN1-217ENST00000534176 HOXA10P31260 410 aaPredicted RBP19.91■□□□□ 0.78
UBXN1-217ENST00000534176 CCDC93Q567U6 631 aa19.91■□□□□ 0.78
UBXN1-217ENST00000534176 RTKN2Q8IZC4 609 aa19.91■□□□□ 0.78
UBXN1-217ENST00000534176 FAM9BQ8IZU0 186 aa19.91■□□□□ 0.78
UBXN1-217ENST00000534176 TRIM28Q13263 835 aaKnown RBP19.9■□□□□ 0.78
UBXN1-217ENST00000534176 ERFEQ4G0M1 354 aa19.9■□□□□ 0.78
UBXN1-217ENST00000534176 NLRP10Q86W26 655 aa19.9■□□□□ 0.78
UBXN1-217ENST00000534176 RBM17Q96I25 401 aaKnown RBP19.9■□□□□ 0.78
UBXN1-217ENST00000534176 TMX4Q9H1E5 349 aaPredicted RBP19.9■□□□□ 0.78
UBXN1-217ENST00000534176 TAOK3Q9H2K8 898 aa19.9■□□□□ 0.78
UBXN1-217ENST00000534176 MYH16Q9H6N6 1097 aa19.9■□□□□ 0.78
UBXN1-217ENST00000534176 NUTM1Q86Y26 1132 aa19.89■□□□□ 0.77
UBXN1-217ENST00000534176 C8orf58Q8NAV2 365 aa19.89■□□□□ 0.77
UBXN1-217ENST00000534176 SH3TC1Q8TE82 1336 aa19.89■□□□□ 0.77
UBXN1-217ENST00000534176 CRAMP1Q96RY5 1269 aa19.89■□□□□ 0.77
UBXN1-217ENST00000534176 SBF1O95248 1867 aa19.88■□□□□ 0.77
UBXN1-217ENST00000534176 ABCC12Q96J65 1359 aa19.88■□□□□ 0.77
UBXN1-217ENST00000534176 C1QTNF8P60827 252 aa19.88■□□□□ 0.77
UBXN1-217ENST00000534176 TWISTNBQ3B726 338 aaPredicted RBP19.88■□□□□ 0.77
UBXN1-217ENST00000534176 RIC3Q7Z5B4 369 aa19.88■□□□□ 0.77
UBXN1-217ENST00000534176 TRMT112Q9UI30 125 aaKnown RBP19.88■□□□□ 0.77
UBXN1-217ENST00000534176 CCER2I3L3R5 266 aa19.87■□□□□ 0.77
UBXN1-217ENST00000534176 NFKBIEO00221 500 aa19.87■□□□□ 0.77
UBXN1-217ENST00000534176 ELL2O00472 640 aaPredicted RBP19.87■□□□□ 0.77
UBXN1-217ENST00000534176 DPY19L2Q6NUT2 758 aa19.87■□□□□ 0.77
UBXN1-217ENST00000534176 C7orf43Q8WVR3 580 aa19.87■□□□□ 0.77
UBXN1-217ENST00000534176 FER1L6Q2WGJ9 1857 aa19.87■□□□□ 0.77
UBXN1-217ENST00000534176 ISCA1Q9BUE6 129 aa19.86■□□□□ 0.77
UBXN1-217ENST00000534176 SLX4Q8IY92 1834 aa19.86■□□□□ 0.77
UBXN1-217ENST00000534176 RASSF7Q02833 373 aa19.85■□□□□ 0.77
UBXN1-217ENST00000534176 TMC4Q7Z404 712 aa19.85■□□□□ 0.77
UBXN1-217ENST00000534176 TSR2Q969E8 191 aaKnown RBP19.85■□□□□ 0.77
UBXN1-217ENST00000534176 FANCIQ9NVI1 1328 aa19.84■□□□□ 0.77
UBXN1-217ENST00000534176 FKBP4Q02790 459 aaKnown RBP eCLIP19.84■□□□□ 0.77
UBXN1-217ENST00000534176 CCDC191Q8NCU4 936 aa19.84■□□□□ 0.77
UBXN1-217ENST00000534176 ZNF526Q8TF50 670 aaPredicted RBP19.84■□□□□ 0.77
UBXN1-217ENST00000534176 BBOX1O75936 387 aa19.83■□□□□ 0.77
UBXN1-217ENST00000534176 NEXNQ0ZGT2 675 aa19.83■□□□□ 0.77
UBXN1-217ENST00000534176 PSMD1Q99460 953 aa19.83■□□□□ 0.77
UBXN1-217ENST00000534176 TNRC6CQ9HCJ0 1690 aaKnown RBP19.83■□□□□ 0.76
UBXN1-217ENST00000534176 CACNA1FO60840 1977 aa19.83■□□□□ 0.76
UBXN1-217ENST00000534176 GLTPD2A6NH11 291 aa19.82■□□□□ 0.76
UBXN1-217ENST00000534176 TSPYL6Q8N831 410 aa19.82■□□□□ 0.76
UBXN1-217ENST00000534176 VPS33BQ9H267 617 aa19.82■□□□□ 0.76
UBXN1-217ENST00000534176 ZNF219Q9P2Y4 722 aaPredicted RBP19.82■□□□□ 0.76
UBXN1-217ENST00000534176 CACNA1SQ13698 1873 aa19.82■□□□□ 0.76
UBXN1-217ENST00000534176 DICER1Q9UPY3 1922 aaKnown RBP19.81■□□□□ 0.76
UBXN1-217ENST00000534176 TOMM70O94826 608 aa19.81■□□□□ 0.76
UBXN1-217ENST00000534176 KSR2Q6VAB6 950 aa19.81■□□□□ 0.76
UBXN1-217ENST00000534176 DDX46Q7L014 1031 aaKnown RBP19.81■□□□□ 0.76
UBXN1-217ENST00000534176 C16orf71Q8IYS4 520 aaPredicted RBP19.81■□□□□ 0.76
UBXN1-217ENST00000534176 ZBTB38Q8NAP3 1195 aaPredicted RBP19.81■□□□□ 0.76
UBXN1-217ENST00000534176 METTL22Q9BUU2 404 aaPredicted RBP19.81■□□□□ 0.76
UBXN1-217ENST00000534176 PHAXQ9H814 394 aaKnown RBP19.81■□□□□ 0.76
UBXN1-217ENST00000534176 PPEF1O14829 653 aaPredicted RBP19.8■□□□□ 0.76
UBXN1-217ENST00000534176 SALL2Q9Y467 1007 aaPredicted RBP19.8■□□□□ 0.76
UBXN1-217ENST00000534176 KIF3CO14782 793 aa19.79■□□□□ 0.76
UBXN1-217ENST00000534176 SLC4A2P04920 1241 aa19.79■□□□□ 0.76
UBXN1-217ENST00000534176 CWC25Q9NXE8 425 aaPredicted RBP19.79■□□□□ 0.76
UBXN1-217ENST00000534176 TIAM2Q8IVF5 1701 aa19.79■□□□□ 0.76
UBXN1-217ENST00000534176 SF3B3Q15393 1217 aaKnown RBP19.78■□□□□ 0.76
UBXN1-217ENST00000534176 SUPT20HQ8NEM7 779 aa19.78■□□□□ 0.76
UBXN1-217ENST00000534176 ATP6V0A2Q9Y487 856 aa19.78■□□□□ 0.76
UBXN1-217ENST00000534176 ATP5J2-PTCD1G3V325 749 aa19.77■□□□□ 0.76
UBXN1-217ENST00000534176 VAMP4O75379 141 aa19.77■□□□□ 0.76
UBXN1-217ENST00000534176 PCCAP05165 728 aaPredicted RBP19.77■□□□□ 0.76
UBXN1-217ENST00000534176 VEGFAP15692 232 aaPredicted RBP19.77■□□□□ 0.76
UBXN1-217ENST00000534176 GRAPQ13588 217 aa19.77■□□□□ 0.76
UBXN1-217ENST00000534176 GRAPLQ8TC17 118 aaPredicted RBP19.77■□□□□ 0.76
UBXN1-217ENST00000534176 JDP2Q8WYK2 163 aa19.77■□□□□ 0.76
UBXN1-217ENST00000534176 MYD88Q99836 296 aa19.77■□□□□ 0.76
UBXN1-217ENST00000534176 CCDC88AQ3V6T2 1871 aa19.77■□□□□ 0.76
UBXN1-217ENST00000534176 ZNF521Q96K83 1311 aa19.76■□□□□ 0.75
UBXN1-217ENST00000534176 PI4KAP2A4QPH2 592 aa19.76■□□□□ 0.75
UBXN1-217ENST00000534176 E9PSI1 815 aa19.76■□□□□ 0.75
UBXN1-217ENST00000534176 IRS4O14654 1257 aaPredicted RBP19.76■□□□□ 0.75
UBXN1-217ENST00000534176 HCLS1P14317 486 aaPredicted RBP19.76■□□□□ 0.75
UBXN1-217ENST00000534176 EXOSC9Q06265 439 aaKnown RBP19.76■□□□□ 0.75
UBXN1-217ENST00000534176 SP8Q8IXZ3 490 aa19.76■□□□□ 0.75
UBXN1-217ENST00000534176 PI4KAP1Q8N8J0 262 aa19.76■□□□□ 0.75
UBXN1-217ENST00000534176 RBM46Q8TBY0 533 aaKnown RBP19.76■□□□□ 0.75
UBXN1-217ENST00000534176 ZNF428Q96B54 188 aa19.76■□□□□ 0.75
UBXN1-217ENST00000534176 FAM89AQ96GI7 184 aa19.76■□□□□ 0.75
UBXN1-217ENST00000534176 MAP3K2Q9Y2U5 619 aa19.76■□□□□ 0.75
UBXN1-217ENST00000534176 ABCC4O15439 1325 aa19.76■□□□□ 0.75
UBXN1-217ENST00000534176 IARSP41252 1262 aaKnown RBP19.75■□□□□ 0.75
UBXN1-217ENST00000534176 PRELPP51888 382 aa19.75■□□□□ 0.75
UBXN1-217ENST00000534176 FLIIQ13045 1269 aa19.75■□□□□ 0.75
UBXN1-217ENST00000534176 SYNE4Q8N205 404 aa19.75■□□□□ 0.75
UBXN1-217ENST00000534176 FSTL1Q12841 308 aa19.74■□□□□ 0.75
UBXN1-217ENST00000534176 NMRK2Q9NPI5 230 aa19.74■□□□□ 0.75
UBXN1-217ENST00000534176 LAMB2P55268 1798 aa19.74■□□□□ 0.75
UBXN1-217ENST00000534176 SNED1Q8TER0 1413 aa19.74■□□□□ 0.75
UBXN1-217ENST00000534176 CDHR2Q9BYE9 1310 aa19.74■□□□□ 0.75
UBXN1-217ENST00000534176 IQCA1LA6NCM1 817 aa19.73■□□□□ 0.75
UBXN1-217ENST00000534176 PDE8AO60658 829 aa19.73■□□□□ 0.75
UBXN1-217ENST00000534176 FKBP5Q13451 457 aaPredicted RBP19.73■□□□□ 0.75
UBXN1-217ENST00000534176 CCDC152Q4G0S7 254 aa19.73■□□□□ 0.75
UBXN1-217ENST00000534176 C3orf67Q6ZVT6 689 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms