RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 MAP3K15Q6ZN16 1313 aa11.76□□□□□ -0.53
RTL1-201ENST00000534062 LRP10Q7Z4F1 713 aa11.76□□□□□ -0.53
RTL1-201ENST00000534062 OTUD7AQ8TE49 926 aaPredicted RBP11.76□□□□□ -0.53
RTL1-201ENST00000534062 ITGB4P16144 1822 aa11.76□□□□□ -0.53
RTL1-201ENST00000534062 DDRGK1Q96HY6 314 aa11.75□□□□□ -0.53
RTL1-201ENST00000534062 ATP10DQ9P241 1426 aa11.75□□□□□ -0.53
RTL1-201ENST00000534062 NUTM1Q86Y26 1132 aa11.75□□□□□ -0.53
RTL1-201ENST00000534062 LINC00116Q8NCU8 138 aa11.75□□□□□ -0.53
RTL1-201ENST00000534062 NIP7Q9Y221 180 aaKnown RBP eCLIP11.75□□□□□ -0.53
RTL1-201ENST00000534062 HSP90AB3PQ58FF7 597 aa11.75□□□□□ -0.53
RTL1-201ENST00000534062 ATRNO75882 1429 aa11.75□□□□□ -0.53
RTL1-201ENST00000534062 ZPR1O75312 459 aa11.75□□□□□ -0.53
RTL1-201ENST00000534062 CCDC191Q8NCU4 936 aa11.75□□□□□ -0.53
RTL1-201ENST00000534062 FBXO41Q8TF61 875 aa11.75□□□□□ -0.53
RTL1-201ENST00000534062 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
RTL1-201ENST00000534062 EPHA10Q5JZY3 1008 aa11.74□□□□□ -0.53
RTL1-201ENST00000534062 GIGYF2Q6Y7W6 1299 aaKnown RBP11.74□□□□□ -0.53
RTL1-201ENST00000534062 RTCBQ9Y3I0 505 aaKnown RBP11.74□□□□□ -0.53
RTL1-201ENST00000534062 PXDNLA1KZ92 1463 aa11.74□□□□□ -0.53
RTL1-201ENST00000534062 APBA3O96018 575 aa11.74□□□□□ -0.53
RTL1-201ENST00000534062 SYNE4Q8N205 404 aa11.74□□□□□ -0.53
RTL1-201ENST00000534062 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
RTL1-201ENST00000534062 INTS5Q6P9B9 1019 aaKnown RBP11.74□□□□□ -0.53
RTL1-201ENST00000534062 CASC1Q6TDU7 716 aa11.74□□□□□ -0.53
RTL1-201ENST00000534062 ZNF652Q9Y2D9 606 aa11.73□□□□□ -0.53
RTL1-201ENST00000534062 GLI3P10071 1580 aa11.73□□□□□ -0.53
RTL1-201ENST00000534062 RFC4P35249 363 aa11.73□□□□□ -0.53
RTL1-201ENST00000534062 CLASRPQ8N2M8 674 aaKnown RBP11.73□□□□□ -0.53
RTL1-201ENST00000534062 SSH3Q8TE77 659 aa11.73□□□□□ -0.53
RTL1-201ENST00000534062 RILPL2Q969X0 211 aa11.73□□□□□ -0.53
RTL1-201ENST00000534062 IFIT2P09913 472 aaKnown RBP11.72□□□□□ -0.53
RTL1-201ENST00000534062 MFAP1P55081 439 aaKnown RBP11.72□□□□□ -0.53
RTL1-201ENST00000534062 CCDC57Q2TAC2 916 aa11.72□□□□□ -0.53
RTL1-201ENST00000534062 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
RTL1-201ENST00000534062 EIF5P55010 431 aaKnown RBP11.72□□□□□ -0.53
RTL1-201ENST00000534062 RHPN1Q8TCX5 695 aa11.72□□□□□ -0.53
RTL1-201ENST00000534062 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
RTL1-201ENST00000534062 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
RTL1-201ENST00000534062 MAP4K4O95819 1239 aaPredicted RBP11.71□□□□□ -0.53
RTL1-201ENST00000534062 HCLS1P14317 486 aaPredicted RBP11.71□□□□□ -0.53
RTL1-201ENST00000534062 CCDC24Q8N4L8 307 aa11.71□□□□□ -0.53
RTL1-201ENST00000534062 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.53
RTL1-201ENST00000534062 CLCN1P35523 988 aa11.71□□□□□ -0.53
RTL1-201ENST00000534062 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
RTL1-201ENST00000534062 COL15A1P39059 1388 aa11.71□□□□□ -0.53
RTL1-201ENST00000534062 BECN1Q14457 450 aa11.71□□□□□ -0.54
RTL1-201ENST00000534062 USPL1Q5W0Q7 1092 aa11.71□□□□□ -0.54
RTL1-201ENST00000534062 AACSQ86V21 672 aa11.71□□□□□ -0.54
RTL1-201ENST00000534062 NEUROD6Q96NK8 337 aa11.71□□□□□ -0.54
RTL1-201ENST00000534062 ONECUT3O60422 494 aaPredicted RBP11.71□□□□□ -0.54
RTL1-201ENST00000534062 NLRP10Q86W26 655 aa11.71□□□□□ -0.54
RTL1-201ENST00000534062 CCDC8Q9H0W5 538 aaPredicted RBP11.71□□□□□ -0.54
RTL1-201ENST00000534062 EP400Q96L91 3159 aa11.7□□□□□ -0.54
RTL1-201ENST00000534062 POTEAQ6S8J7 498 aa11.7□□□□□ -0.54
RTL1-201ENST00000534062 KAZALD1Q96I82 304 aa11.7□□□□□ -0.54
RTL1-201ENST00000534062 RAB11FIP3O75154 756 aa11.7□□□□□ -0.54
RTL1-201ENST00000534062 TRAPPC3LQ5T215 181 aa11.7□□□□□ -0.54
RTL1-201ENST00000534062 PLEKHM2Q8IWE5 1019 aa11.7□□□□□ -0.54
RTL1-201ENST00000534062 ISCA1Q9BUE6 129 aa11.7□□□□□ -0.54
RTL1-201ENST00000534062 WNK3Q9BYP7 1800 aa11.7□□□□□ -0.54
RTL1-201ENST00000534062 MX1P20591 662 aa11.69□□□□□ -0.54
RTL1-201ENST00000534062 H7C1W4 665 aa11.69□□□□□ -0.54
RTL1-201ENST00000534062 IFIT5Q13325 482 aaKnown RBP11.69□□□□□ -0.54
RTL1-201ENST00000534062 ERC1Q8IUD2 1116 aa11.69□□□□□ -0.54
RTL1-201ENST00000534062 UTP14AQ9BVJ6 771 aaKnown RBP11.69□□□□□ -0.54
RTL1-201ENST00000534062 TFCP2L1Q9NZI6 479 aa11.69□□□□□ -0.54
RTL1-201ENST00000534062 ZBTB38Q8NAP3 1195 aaPredicted RBP11.69□□□□□ -0.54
RTL1-201ENST00000534062 C8orf34Q49A92 452 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 CNNM1Q9NRU3 951 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 ERVV-1B6SEH8 477 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 POLA2Q14181 598 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 GORABQ5T7V8 394 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 GPATCH3Q96I76 525 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 SETDB2Q96T68 719 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
RTL1-201ENST00000534062 PCCAP05165 728 aaPredicted RBP11.68□□□□□ -0.54
RTL1-201ENST00000534062 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
RTL1-201ENST00000534062 SUSD4Q5VX71 490 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 SH3TC1Q8TE82 1336 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
RTL1-201ENST00000534062 RPS6KA4O75676 772 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 PDE1AP54750 535 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 TXNRD1Q16881 649 aa11.68□□□□□ -0.54
RTL1-201ENST00000534062 NBPF5PQ86XG9 351 aaPredicted RBP11.68□□□□□ -0.54
RTL1-201ENST00000534062 CAMTA2O94983 1202 aa11.67□□□□□ -0.54
RTL1-201ENST00000534062 LRRC4BQ9NT99 713 aa11.67□□□□□ -0.54
RTL1-201ENST00000534062 LAMB4A4D0S4 1761 aa11.67□□□□□ -0.54
RTL1-201ENST00000534062 ARHGEF1Q92888 912 aaKnown RBP11.67□□□□□ -0.54
RTL1-201ENST00000534062 UBR2Q8IWV8 1755 aa11.67□□□□□ -0.54
RTL1-201ENST00000534062 UBN2Q6ZU65 1347 aa11.66□□□□□ -0.54
RTL1-201ENST00000534062 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
RTL1-201ENST00000534062 TFCP2Q12800 502 aa11.66□□□□□ -0.54
RTL1-201ENST00000534062 TTC22Q5TAA0 569 aa11.66□□□□□ -0.54
RTL1-201ENST00000534062 LDHAL6AQ6ZMR3 332 aa11.66□□□□□ -0.54
RTL1-201ENST00000534062 UTYO14607 1347 aa11.66□□□□□ -0.54
RTL1-201ENST00000534062 ANKRD18BA2A2Z9 1011 aa11.66□□□□□ -0.54
RTL1-201ENST00000534062 SEC24BO95487 1268 aa11.66□□□□□ -0.54
RTL1-201ENST00000534062 MTX1Q13505 466 aa11.66□□□□□ -0.54
RTL1-201ENST00000534062 ITGA6P23229 1130 aa11.65□□□□□ -0.54
RTL1-201ENST00000534062 FOXO4P98177 505 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms