RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 GPC2Q8N158 579 aa12.65□□□□□ -0.38
SOX9-AS1-213ENST00000533996 GPR101Q96P66 508 aaPredicted RBP12.65□□□□□ -0.38
SOX9-AS1-213ENST00000533996 TNRC18O15417 2968 aaPredicted RBP12.64□□□□□ -0.39
SOX9-AS1-213ENST00000533996 NPM2Q86SE8 214 aaKnown RBP12.64□□□□□ -0.39
SOX9-AS1-213ENST00000533996 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
SOX9-AS1-213ENST00000533996 CAPNS2Q96L46 248 aa12.64□□□□□ -0.39
SOX9-AS1-213ENST00000533996 PCDHB13Q9Y5F0 798 aa12.64□□□□□ -0.39
SOX9-AS1-213ENST00000533996 NPR1P16066 1061 aa12.63□□□□□ -0.39
SOX9-AS1-213ENST00000533996 IL13P35225 146 aa12.63□□□□□ -0.39
SOX9-AS1-213ENST00000533996 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
SOX9-AS1-213ENST00000533996 PCDHB8Q9UN66 801 aa12.63□□□□□ -0.39
SOX9-AS1-213ENST00000533996 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
SOX9-AS1-213ENST00000533996 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
SOX9-AS1-213ENST00000533996 BCORQ6W2J9 1755 aa12.62□□□□□ -0.39
SOX9-AS1-213ENST00000533996 KLRG2A4D1S0 409 aaPredicted RBP12.62□□□□□ -0.39
SOX9-AS1-213ENST00000533996 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
SOX9-AS1-213ENST00000533996 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
SOX9-AS1-213ENST00000533996 RYDENQ9NUL5 291 aaKnown RBP12.62□□□□□ -0.39
SOX9-AS1-213ENST00000533996 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
SOX9-AS1-213ENST00000533996 ALDH1B1P30837 517 aa12.61□□□□□ -0.39
SOX9-AS1-213ENST00000533996 IARSP41252 1262 aaKnown RBP12.61□□□□□ -0.39
SOX9-AS1-213ENST00000533996 MCOLN1Q9GZU1 580 aa12.61□□□□□ -0.39
SOX9-AS1-213ENST00000533996 ZNF277Q9NRM2 450 aaPredicted RBP12.61□□□□□ -0.39
SOX9-AS1-213ENST00000533996 TLL2Q9Y6L7 1015 aa12.61□□□□□ -0.39
SOX9-AS1-213ENST00000533996 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
SOX9-AS1-213ENST00000533996 CAMTA2O94983 1202 aa12.6□□□□□ -0.39
SOX9-AS1-213ENST00000533996 LMOD1P29536 600 aaPredicted RBP12.6□□□□□ -0.39
SOX9-AS1-213ENST00000533996 CYP4F22Q6NT55 531 aa12.6□□□□□ -0.39
SOX9-AS1-213ENST00000533996 USP50Q70EL3 339 aaPredicted RBP12.6□□□□□ -0.39
SOX9-AS1-213ENST00000533996 MORC1Q86VD1 984 aa12.6□□□□□ -0.39
SOX9-AS1-213ENST00000533996 SYNE4Q8N205 404 aa12.6□□□□□ -0.39
SOX9-AS1-213ENST00000533996 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
SOX9-AS1-213ENST00000533996 HHIPL1Q96JK4 782 aa12.6□□□□□ -0.39
SOX9-AS1-213ENST00000533996 PSMD1Q99460 953 aa12.6□□□□□ -0.39
SOX9-AS1-213ENST00000533996 MAP3K13O43283 966 aa12.59□□□□□ -0.39
SOX9-AS1-213ENST00000533996 EIF6P56537 245 aaKnown RBP12.59□□□□□ -0.39
SOX9-AS1-213ENST00000533996 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
SOX9-AS1-213ENST00000533996 CST9Q5W186 159 aa12.59□□□□□ -0.39
SOX9-AS1-213ENST00000533996 ZNF790Q6PG37 636 aa12.59□□□□□ -0.39
SOX9-AS1-213ENST00000533996 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
SOX9-AS1-213ENST00000533996 NBPF5PQ86XG9 351 aaPredicted RBP12.59□□□□□ -0.39
SOX9-AS1-213ENST00000533996 LTBP1Q14766 1721 aa12.59□□□□□ -0.39
SOX9-AS1-213ENST00000533996 CASP8AP2Q9UKL3 1982 aa12.58□□□□□ -0.4
SOX9-AS1-213ENST00000533996 PSEN1P49768 467 aa12.58□□□□□ -0.4
SOX9-AS1-213ENST00000533996 BRPF1P55201 1214 aaPredicted RBP12.58□□□□□ -0.4
SOX9-AS1-213ENST00000533996 MTHFSDQ2M296 383 aaKnown RBP12.58□□□□□ -0.4
SOX9-AS1-213ENST00000533996 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
SOX9-AS1-213ENST00000533996 DZIP3Q86Y13 1208 aaKnown RBP12.58□□□□□ -0.4
SOX9-AS1-213ENST00000533996 ZNF496Q96IT1 587 aaPredicted RBP12.58□□□□□ -0.4
SOX9-AS1-213ENST00000533996 ZNF652Q9Y2D9 606 aa12.58□□□□□ -0.4
SOX9-AS1-213ENST00000533996 ZNF330Q9Y3S2 320 aaPredicted RBP12.58□□□□□ -0.4
SOX9-AS1-213ENST00000533996 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
SOX9-AS1-213ENST00000533996 IFNL1Q8IU54 200 aa12.57□□□□□ -0.4
SOX9-AS1-213ENST00000533996 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
SOX9-AS1-213ENST00000533996 PANK3Q9H999 370 aa12.57□□□□□ -0.4
SOX9-AS1-213ENST00000533996 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
SOX9-AS1-213ENST00000533996 GTPBP6O43824 516 aaPredicted RBP12.56□□□□□ -0.4
SOX9-AS1-213ENST00000533996 TEFQ10587 303 aa12.56□□□□□ -0.4
SOX9-AS1-213ENST00000533996 GRM1Q13255 1194 aa12.56□□□□□ -0.4
SOX9-AS1-213ENST00000533996 DGKZQ13574 1117 aa12.56□□□□□ -0.4
SOX9-AS1-213ENST00000533996 SAPCD2Q86UD0 394 aa12.56□□□□□ -0.4
SOX9-AS1-213ENST00000533996 AOC2O75106 756 aa12.55□□□□□ -0.4
SOX9-AS1-213ENST00000533996 A1BGP04217 495 aa12.55□□□□□ -0.4
SOX9-AS1-213ENST00000533996 SCNN1DP51172 638 aa12.55□□□□□ -0.4
SOX9-AS1-213ENST00000533996 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
SOX9-AS1-213ENST00000533996 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
SOX9-AS1-213ENST00000533996 GJA3Q9Y6H8 435 aa12.55□□□□□ -0.4
SOX9-AS1-213ENST00000533996 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
SOX9-AS1-213ENST00000533996 HMOX1P09601 288 aa12.54□□□□□ -0.4
SOX9-AS1-213ENST00000533996 EPS15P42566 896 aa12.54□□□□□ -0.4
SOX9-AS1-213ENST00000533996 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
SOX9-AS1-213ENST00000533996 FMR1Q06787 632 aaKnown RBP eCLIP12.53□□□□□ -0.4
SOX9-AS1-213ENST00000533996 OLFM4Q6UX06 510 aa12.53□□□□□ -0.4
SOX9-AS1-213ENST00000533996 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
SOX9-AS1-213ENST00000533996 VPS33BQ9H267 617 aa12.53□□□□□ -0.4
SOX9-AS1-213ENST00000533996 ADARB2Q9NS39 739 aaKnown RBP12.53□□□□□ -0.4
SOX9-AS1-213ENST00000533996 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
SOX9-AS1-213ENST00000533996 GNAT3A8MTJ3 354 aa12.52□□□□□ -0.41
SOX9-AS1-213ENST00000533996 TRAF5O00463 557 aa12.52□□□□□ -0.41
SOX9-AS1-213ENST00000533996 PRPF38BQ5VTL8 546 aaKnown RBP12.52□□□□□ -0.41
SOX9-AS1-213ENST00000533996 IL17REQ8NFR9 667 aa12.52□□□□□ -0.41
SOX9-AS1-213ENST00000533996 PGAP2Q9UHJ9 254 aa12.52□□□□□ -0.41
SOX9-AS1-213ENST00000533996 KNSTRNQ9Y448 316 aa12.52□□□□□ -0.41
SOX9-AS1-213ENST00000533996 CELF2O95319 508 aaKnown RBP12.51□□□□□ -0.41
SOX9-AS1-213ENST00000533996 NOGQ13253 232 aa12.51□□□□□ -0.41
SOX9-AS1-213ENST00000533996 CRY2Q49AN0 593 aa12.51□□□□□ -0.41
SOX9-AS1-213ENST00000533996 GAS2L2Q8NHY3 880 aa12.51□□□□□ -0.41
SOX9-AS1-213ENST00000533996 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
SOX9-AS1-213ENST00000533996 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.41
SOX9-AS1-213ENST00000533996 PDE4DIPQ5VU43 2346 aa12.51□□□□□ -0.41
SOX9-AS1-213ENST00000533996 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
SOX9-AS1-213ENST00000533996 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
SOX9-AS1-213ENST00000533996 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
SOX9-AS1-213ENST00000533996 NYXQ9GZU5 481 aa12.5□□□□□ -0.41
SOX9-AS1-213ENST00000533996 SAGE1Q9NXZ1 904 aa12.5□□□□□ -0.41
SOX9-AS1-213ENST00000533996 GPRC5DQ9NZD1 345 aa12.5□□□□□ -0.41
SOX9-AS1-213ENST00000533996 USP16Q9Y5T5 823 aa12.5□□□□□ -0.41
SOX9-AS1-213ENST00000533996 COL4A5P29400 1685 aa12.49□□□□□ -0.41
SOX9-AS1-213ENST00000533996 BTBD11A6QL63 1104 aa12.49□□□□□ -0.41
SOX9-AS1-213ENST00000533996 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms