RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 PXDNLA1KZ92 1463 aa17.82■□□□□ 0.44
CMTM1-218ENST00000533915 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
CMTM1-218ENST00000533915 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
CMTM1-218ENST00000533915 SGIP1Q9BQI5 828 aa17.81■□□□□ 0.44
CMTM1-218ENST00000533915 UBN2Q6ZU65 1347 aa17.8■□□□□ 0.44
CMTM1-218ENST00000533915 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
CMTM1-218ENST00000533915 NEURL1BA8MQ27 555 aa17.8■□□□□ 0.44
CMTM1-218ENST00000533915 TRIM27P14373 513 aa17.8■□□□□ 0.44
CMTM1-218ENST00000533915 BEND3Q5T5X7 828 aa17.8■□□□□ 0.44
CMTM1-218ENST00000533915 SUSD4Q5VX71 490 aa17.8■□□□□ 0.44
CMTM1-218ENST00000533915 AFDNP55196 1824 aaKnown RBP17.79■□□□□ 0.44
CMTM1-218ENST00000533915 IGKV5-2P06315 115 aa17.79■□□□□ 0.44
CMTM1-218ENST00000533915 DZIP1LQ8IYY4 767 aaKnown RBP17.79■□□□□ 0.44
CMTM1-218ENST00000533915 ZBTB38Q8NAP3 1195 aaPredicted RBP17.79■□□□□ 0.44
CMTM1-218ENST00000533915 PDZRN3Q9UPQ7 1066 aa17.79■□□□□ 0.44
CMTM1-218ENST00000533915 HDAC5Q9UQL6 1122 aa17.79■□□□□ 0.44
CMTM1-218ENST00000533915 ABCC4O15439 1325 aa17.78■□□□□ 0.44
CMTM1-218ENST00000533915 PCCAP05165 728 aaPredicted RBP17.78■□□□□ 0.44
CMTM1-218ENST00000533915 GCKRQ14397 625 aa17.78■□□□□ 0.44
CMTM1-218ENST00000533915 CWF19L2Q2TBE0 894 aaKnown RBP17.78■□□□□ 0.44
CMTM1-218ENST00000533915 PRR5LQ6MZQ0 368 aa17.78■□□□□ 0.44
CMTM1-218ENST00000533915 C9orf78Q9NZ63 289 aaPredicted RBP17.78■□□□□ 0.44
CMTM1-218ENST00000533915 CD2APQ9Y5K6 639 aa17.78■□□□□ 0.44
CMTM1-218ENST00000533915 NTSR2O95665 410 aa17.77■□□□□ 0.44
CMTM1-218ENST00000533915 PDE6BP35913 854 aa17.77■□□□□ 0.44
CMTM1-218ENST00000533915 INTS3Q68E01 1043 aaKnown RBP17.77■□□□□ 0.44
CMTM1-218ENST00000533915 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.44
CMTM1-218ENST00000533915 BRIP1Q9BX63 1249 aa17.77■□□□□ 0.44
CMTM1-218ENST00000533915 LRP5O75197 1615 aa17.76■□□□□ 0.43
CMTM1-218ENST00000533915 KLHL34Q8N239 644 aa17.76■□□□□ 0.43
CMTM1-218ENST00000533915 CHMP4BQ9H444 224 aaKnown RBP17.76■□□□□ 0.43
CMTM1-218ENST00000533915 NRXN2Q9P2S2 1712 aa17.75■□□□□ 0.43
CMTM1-218ENST00000533915 GRM8O00222 908 aa17.75■□□□□ 0.43
CMTM1-218ENST00000533915 PDE3AQ14432 1141 aa17.75■□□□□ 0.43
CMTM1-218ENST00000533915 NUTM1Q86Y26 1132 aa17.75■□□□□ 0.43
CMTM1-218ENST00000533915 FAM89AQ96GI7 184 aa17.75■□□□□ 0.43
CMTM1-218ENST00000533915 RRP1P56182 461 aaKnown RBP17.74■□□□□ 0.43
CMTM1-218ENST00000533915 TGFB2P61812 414 aa17.74■□□□□ 0.43
CMTM1-218ENST00000533915 ERFEQ4G0M1 354 aa17.74■□□□□ 0.43
CMTM1-218ENST00000533915 SLC10A5Q5PT55 438 aa17.74■□□□□ 0.43
CMTM1-218ENST00000533915 NLRP3Q96P20 1036 aa17.74■□□□□ 0.43
CMTM1-218ENST00000533915 CDHR2Q9BYE9 1310 aa17.73■□□□□ 0.43
CMTM1-218ENST00000533915 RIC1Q4ADV7 1423 aa17.73■□□□□ 0.43
CMTM1-218ENST00000533915 C10orf71Q711Q0 1435 aa17.73■□□□□ 0.43
CMTM1-218ENST00000533915 H7C1W4 665 aa17.73■□□□□ 0.43
CMTM1-218ENST00000533915 IRS4O14654 1257 aaPredicted RBP17.73■□□□□ 0.43
CMTM1-218ENST00000533915 UBE3BQ7Z3V4 1068 aa17.73■□□□□ 0.43
CMTM1-218ENST00000533915 ITPRIPQ8IWB1 547 aa17.73■□□□□ 0.43
CMTM1-218ENST00000533915 N4BP2Q86UW6 1770 aaPredicted RBP17.73■□□□□ 0.43
CMTM1-218ENST00000533915 H0YIN7 160 aa17.72■□□□□ 0.43
CMTM1-218ENST00000533915 PLIN1O60240 522 aa17.72■□□□□ 0.43
CMTM1-218ENST00000533915 GNAI3P08754 354 aa17.72■□□□□ 0.43
CMTM1-218ENST00000533915 RTL5Q5HYW3 569 aaPredicted RBP17.72■□□□□ 0.43
CMTM1-218ENST00000533915 TMEM57Q8N5G2 664 aa17.72■□□□□ 0.43
CMTM1-218ENST00000533915 PDE8AO60658 829 aa17.71■□□□□ 0.43
CMTM1-218ENST00000533915 UBTFL1P0CB47 393 aaPredicted RBP17.71■□□□□ 0.43
CMTM1-218ENST00000533915 KIF13BQ9NQT8 1826 aa17.7■□□□□ 0.42
CMTM1-218ENST00000533915 HCLS1P14317 486 aaPredicted RBP17.7■□□□□ 0.42
CMTM1-218ENST00000533915 CCDC24Q8N4L8 307 aa17.7■□□□□ 0.42
CMTM1-218ENST00000533915 RPGRQ92834 1020 aaKnown RBP17.7■□□□□ 0.42
CMTM1-218ENST00000533915 FHDC1Q9C0D6 1143 aaPredicted RBP17.7■□□□□ 0.42
CMTM1-218ENST00000533915 DDX19BQ9UMR2 479 aa17.7■□□□□ 0.42
CMTM1-218ENST00000533915 UTYO14607 1347 aa17.7■□□□□ 0.42
CMTM1-218ENST00000533915 SRCAPQ6ZRS2 3230 aa17.7■□□□□ 0.42
CMTM1-218ENST00000533915 ABCC12Q96J65 1359 aa17.69■□□□□ 0.42
CMTM1-218ENST00000533915 C2CD5Q86YS7 1000 aa17.69■□□□□ 0.42
CMTM1-218ENST00000533915 PANK1Q8TE04 598 aa17.69■□□□□ 0.42
CMTM1-218ENST00000533915 USP44Q9H0E7 712 aa17.69■□□□□ 0.42
CMTM1-218ENST00000533915 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
CMTM1-218ENST00000533915 KLRG2A4D1S0 409 aaPredicted RBP17.68■□□□□ 0.42
CMTM1-218ENST00000533915 RLBP1P12271 317 aa17.68■□□□□ 0.42
CMTM1-218ENST00000533915 MVPQ14764 893 aaKnown RBP17.68■□□□□ 0.42
CMTM1-218ENST00000533915 CCDC152Q4G0S7 254 aa17.68■□□□□ 0.42
CMTM1-218ENST00000533915 MASTLQ96GX5 879 aa17.68■□□□□ 0.42
CMTM1-218ENST00000533915 PLA2G12BQ9BX93 195 aa17.68■□□□□ 0.42
CMTM1-218ENST00000533915 TNNQ9UQP3 1299 aa17.68■□□□□ 0.42
CMTM1-218ENST00000533915 NPR1P16066 1061 aa17.67■□□□□ 0.42
CMTM1-218ENST00000533915 SYNE4Q8N205 404 aa17.67■□□□□ 0.42
CMTM1-218ENST00000533915 JARID2Q92833 1246 aaPredicted RBP17.67■□□□□ 0.42
CMTM1-218ENST00000533915 RBM17Q96I25 401 aaKnown RBP17.67■□□□□ 0.42
CMTM1-218ENST00000533915 SYT17Q9BSW7 474 aa17.67■□□□□ 0.42
CMTM1-218ENST00000533915 LAMB2P55268 1798 aa17.66■□□□□ 0.42
CMTM1-218ENST00000533915 NBPF7P0C2Y1 421 aaPredicted RBP17.66■□□□□ 0.42
CMTM1-218ENST00000533915 ALDH1B1P30837 517 aa17.66■□□□□ 0.42
CMTM1-218ENST00000533915 CASP7P55210 303 aa17.66■□□□□ 0.42
CMTM1-218ENST00000533915 CTSWP56202 376 aa17.66■□□□□ 0.42
CMTM1-218ENST00000533915 SF3B3Q15393 1217 aaKnown RBP17.66■□□□□ 0.42
CMTM1-218ENST00000533915 CRY2Q49AN0 593 aa17.66■□□□□ 0.42
CMTM1-218ENST00000533915 STYK1Q6J9G0 422 aa17.66■□□□□ 0.42
CMTM1-218ENST00000533915 DDX46Q7L014 1031 aaKnown RBP17.66■□□□□ 0.42
CMTM1-218ENST00000533915 CNKSR1Q969H4 720 aa17.66■□□□□ 0.42
CMTM1-218ENST00000533915 MYH3P11055 1940 aa17.66■□□□□ 0.42
CMTM1-218ENST00000533915 ANKRD31Q8N7Z5 1873 aa17.65■□□□□ 0.42
CMTM1-218ENST00000533915 GNAI2P04899 355 aa17.65■□□□□ 0.42
CMTM1-218ENST00000533915 SRGNP10124 158 aa17.65■□□□□ 0.42
CMTM1-218ENST00000533915 DPEP1P16444 411 aa17.65■□□□□ 0.42
CMTM1-218ENST00000533915 ZNF622Q969S3 477 aaKnown RBP eCLIP17.65■□□□□ 0.42
CMTM1-218ENST00000533915 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
CMTM1-218ENST00000533915 COG6Q9Y2V7 657 aa17.65■□□□□ 0.42
CMTM1-218ENST00000533915 DDX60Q8IY21 1712 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms