RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 HMG20BQ9P0W2 317 aa14.38□□□□□ -0.11
ATM-222ENST00000533733 PA2G4Q9UQ80 394 aaKnown RBP14.38□□□□□ -0.11
ATM-222ENST00000533733 JCADQ9P266 1359 aa14.38□□□□□ -0.11
ATM-222ENST00000533733 PRPF40AO75400 957 aaKnown RBP14.38□□□□□ -0.11
ATM-222ENST00000533733 PHF14O94880 888 aa14.38□□□□□ -0.11
ATM-222ENST00000533733 ZSCAN23Q3MJ62 389 aa14.38□□□□□ -0.11
ATM-222ENST00000533733 GAS2L3Q86XJ1 694 aa14.38□□□□□ -0.11
ATM-222ENST00000533733 EAF2Q96CJ1 260 aaPredicted RBP14.38□□□□□ -0.11
ATM-222ENST00000533733 TRIM44Q96DX7 344 aaPredicted RBP14.38□□□□□ -0.11
ATM-222ENST00000533733 ALDH8A1Q9H2A2 487 aaPredicted RBP14.38□□□□□ -0.11
ATM-222ENST00000533733 ZSWIM6Q9HCJ5 1215 aa14.38□□□□□ -0.11
ATM-222ENST00000533733 CYP46A1Q9Y6A2 500 aa14.38□□□□□ -0.11
ATM-222ENST00000533733 SHANK3Q9BYB0 1731 aa14.37□□□□□ -0.11
ATM-222ENST00000533733 MYL6BP14649 208 aa14.37□□□□□ -0.11
ATM-222ENST00000533733 NASPP49321 788 aaPredicted RBP14.37□□□□□ -0.11
ATM-222ENST00000533733 NKX1-1Q15270 411 aaPredicted RBP14.37□□□□□ -0.11
ATM-222ENST00000533733 ANKRD1Q15327 319 aa14.37□□□□□ -0.11
ATM-222ENST00000533733 CSPP1Q1MSJ5 1256 aa14.37□□□□□ -0.11
ATM-222ENST00000533733 TMEM87AQ8NBN3 555 aa14.37□□□□□ -0.11
ATM-222ENST00000533733 MAP4K1Q92918 833 aa14.37□□□□□ -0.11
ATM-222ENST00000533733 PANK2Q9BZ23 570 aa14.37□□□□□ -0.11
ATM-222ENST00000533733 RTN4Q9NQC3 1192 aaKnown RBP14.37□□□□□ -0.11
ATM-222ENST00000533733 COL5A2P05997 1499 aaPredicted RBP14.36□□□□□ -0.11
ATM-222ENST00000533733 ATP5JP18859 108 aa14.36□□□□□ -0.11
ATM-222ENST00000533733 NECTIN1Q15223 517 aa14.36□□□□□ -0.11
ATM-222ENST00000533733 CAVIN1Q6NZI2 390 aaKnown RBP14.36□□□□□ -0.11
ATM-222ENST00000533733 PPP1R9BQ96SB3 815 aa14.36□□□□□ -0.11
ATM-222ENST00000533733 SOS2Q07890 1332 aaPredicted RBP14.36□□□□□ -0.11
ATM-222ENST00000533733 TJP1Q07157 1748 aa14.36□□□□□ -0.11
ATM-222ENST00000533733 AK2P54819 239 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 ZCRB1Q8TBF4 217 aaKnown RBP14.35□□□□□ -0.11
ATM-222ENST00000533733 GPR108Q9NPR9 543 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 USP16Q9Y5T5 823 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 TCHHQ07283 1943 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 NHSL1Q5SYE7 1610 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 MED23Q9ULK4 1368 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 CASTP20810 708 aaKnown RBP14.35□□□□□ -0.11
ATM-222ENST00000533733 CLCN1P35523 988 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 RFX5P48382 616 aaPredicted RBP14.35□□□□□ -0.11
ATM-222ENST00000533733 KRT32Q14532 448 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 TSGA10IPQ3SY00 556 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 HS1BP3Q53T59 392 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 RUFY3Q7L099 469 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 RASEFQ8IZ41 740 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 FSD1Q9BTV5 496 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 PDRG1Q9NUG6 133 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 SMC3Q9UQE7 1217 aa14.35□□□□□ -0.11
ATM-222ENST00000533733 RPAP1Q9BWH6 1393 aaPredicted RBP14.34□□□□□ -0.11
ATM-222ENST00000533733 KCPQ6ZWJ8 1503 aa14.34□□□□□ -0.11
ATM-222ENST00000533733 BRINP3Q76B58 766 aa14.34□□□□□ -0.11
ATM-222ENST00000533733 GPT2Q8TD30 523 aa14.34□□□□□ -0.11
ATM-222ENST00000533733 ARXQ96QS3 562 aa14.34□□□□□ -0.11
ATM-222ENST00000533733 CARD10Q9BWT7 1032 aa14.34□□□□□ -0.11
ATM-222ENST00000533733 ATG3Q9NT62 314 aa14.34□□□□□ -0.11
ATM-222ENST00000533733 TNS2Q63HR2 1409 aa14.34□□□□□ -0.11
ATM-222ENST00000533733 LETM1O95202 739 aaPredicted RBP14.33□□□□□ -0.12
ATM-222ENST00000533733 ZSCAN22P10073 491 aaPredicted RBP14.33□□□□□ -0.12
ATM-222ENST00000533733 KCNJ4P48050 445 aa14.33□□□□□ -0.12
ATM-222ENST00000533733 PTPN12Q05209 780 aaKnown RBP14.33□□□□□ -0.12
ATM-222ENST00000533733 NMIQ13287 307 aaPredicted RBP14.33□□□□□ -0.12
ATM-222ENST00000533733 CHRNA2Q15822 529 aa14.33□□□□□ -0.12
ATM-222ENST00000533733 JAKMIP1Q96N16 626 aaKnown RBP14.33□□□□□ -0.12
ATM-222ENST00000533733 CCDC8Q9H0W5 538 aaPredicted RBP14.33□□□□□ -0.12
ATM-222ENST00000533733 PRDM11Q9NQV5 511 aa14.33□□□□□ -0.12
ATM-222ENST00000533733 RBM8AQ9Y5S9 174 aaKnown RBP14.33□□□□□ -0.12
ATM-222ENST00000533733 STRCQ7RTU9 1775 aa14.33□□□□□ -0.12
ATM-222ENST00000533733 STX6O43752 255 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 TNNI3KQ59H18 835 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 CREB3L3Q68CJ9 461 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 PRPF40BQ6NWY9 871 aaKnown RBP14.32□□□□□ -0.12
ATM-222ENST00000533733 CABLES1Q8TDN4 633 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 FBXO3Q9UK99 471 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 FPGT-TNNI3KV9GXZ4 949 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 A0A087WZG4 1122 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 H7C1W4 665 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 IL2RBP14784 551 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 PDCP20941 246 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 CASP7P55210 303 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 PTH1RQ03431 593 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 TOM1L2Q6ZVM7 507 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 CCDC191Q8NCU4 936 aa14.32□□□□□ -0.12
ATM-222ENST00000533733 DDX17Q92841 729 aaKnown RBP14.32□□□□□ -0.12
ATM-222ENST00000533733 CWC25Q9NXE8 425 aaPredicted RBP14.32□□□□□ -0.12
ATM-222ENST00000533733 NOL8Q76FK4 1167 aaKnown RBP14.31□□□□□ -0.12
ATM-222ENST00000533733 UBE3BQ7Z3V4 1068 aa14.31□□□□□ -0.12
ATM-222ENST00000533733 TEX13AQ9BXU3 409 aaPredicted RBP14.31□□□□□ -0.12
ATM-222ENST00000533733 SIL1Q9H173 461 aa14.31□□□□□ -0.12
ATM-222ENST00000533733 EPHA10Q5JZY3 1008 aa14.3□□□□□ -0.12
ATM-222ENST00000533733 USPL1Q5W0Q7 1092 aa14.3□□□□□ -0.12
ATM-222ENST00000533733 BOLA2Q9H3K6 86 aa14.3□□□□□ -0.12
ATM-222ENST00000533733 PALLDQ8WX93 1383 aa14.3□□□□□ -0.12
ATM-222ENST00000533733 ESPNB1AK53 854 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 SLC27A2O14975 620 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 F13A1P00488 732 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 IL15P40933 162 aaPredicted RBP14.29□□□□□ -0.12
ATM-222ENST00000533733 BLOC1S2Q6QNY1 142 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 FAM184AQ8NB25 1140 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 HAUS7Q99871 368 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms