RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 RANBP6O60518 1105 aaKnown RBP8.07□□□□□ -1.12
CTNND1-236ENST00000533667 SMC1AQ14683 1233 aaKnown RBP8.07□□□□□ -1.12
CTNND1-236ENST00000533667 CCDC178Q5BJE1 867 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 CWC25Q9NXE8 425 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-236ENST00000533667 ORC3Q9UBD5 711 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-236ENST00000533667 DISP3Q9P2K9 1392 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 ZPR1O75312 459 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 MATR3P43243 847 aaKnown RBP eCLIP8.07□□□□□ -1.126e-7■■■■□ 22.1
CTNND1-236ENST00000533667 SF3B2Q13435 895 aaKnown RBP8.07□□□□□ -1.12
CTNND1-236ENST00000533667 TMC6Q7Z403 805 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 CRACR2BQ8N4Y2 399 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-236ENST00000533667 CTAGE1Q96RT6 745 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 TRMT112Q9UI30 125 aaKnown RBP8.07□□□□□ -1.12
CTNND1-236ENST00000533667 TTC21AQ8NDW8 1320 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 SPAG1Q07617 926 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 ZSCAN23Q3MJ62 389 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 PPP1R42Q7Z4L9 355 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 IFNL2Q8IZJ0 200 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 TMTC2Q8N394 836 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 KCNG4Q8TDN1 519 aa8.07□□□□□ -1.12
CTNND1-236ENST00000533667 ALDH1L1O75891 902 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 IGHDP01880 384 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 LIG1P18858 919 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 TUBB4BP68371 445 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 IFFO1Q0D2I5 559 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 IFI16Q16666 785 aaKnown RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 CCDC85AQ96PX6 553 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 CDC5LQ99459 802 aaKnown RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 MAP3K2Q9Y2U5 619 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 GOLGA6L10A0A0M3HER8 536 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 ERICH4A6NGS2 130 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 MTIF2P46199 727 aaKnown RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 METAP2P50579 478 aaKnown RBP eCLIP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 PDE4BQ07343 736 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 SPTY2D1Q68D10 685 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 ANKRD44Q8N8A2 993 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 RHPN1Q8TCX5 695 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 TMX3Q96JJ7 454 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 C16orf45Q96MC5 204 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 SPINK5Q9NQ38 1064 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 POLR3AO14802 1390 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 PTCD1O75127 700 aaKnown RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 SARNPP82979 210 aaKnown RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 HS1BP3Q53T59 392 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 TMEM67Q5HYA8 995 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 PIBF1Q8WXW3 757 aa8.06□□□□□ -1.12
CTNND1-236ENST00000533667 SMARCC1Q92922 1105 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-236ENST00000533667 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.06□□□□□ -1.124e-9■□□□□ 9.9
CTNND1-236ENST00000533667 NEBLO76041 1014 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 GUCY1B3Q02153 619 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 CKAP4Q07065 602 aaKnown RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 TDRD12Q587J7 1177 aaKnown RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 PPP4R3BQ5MIZ7 849 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 DDX12PQ92771 950 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 SUDS3Q9H7L9 328 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 CCT2P78371 535 aaKnown RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 CEP135Q66GS9 1140 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 MPRIPQ6WCQ1 1025 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 MFSD6Q6ZSS7 791 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 FAM200AQ8TCP9 573 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 AMOTL2Q9Y2J4 779 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 NBPF7P0C2Y1 421 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 CCDC172P0C7W6 258 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 CLCN1P35523 988 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 RBM25P49756 843 aaKnown RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 IDI1Q13907 227 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 SRRTQ9BXP5 876 aaKnown RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 KRT23Q9C075 422 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 CNNM2Q9H8M5 875 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 SOS1Q07889 1333 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 EIF2AK4Q9P2K8 1649 aaKnown RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 BAG3O95817 575 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 SNRPA1P09661 255 aaKnown RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 UBA7P41226 1012 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 TRAF1Q13077 416 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 ANKRD24Q8TF21 1146 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 PARD3Q8TEW0 1356 aa8.05□□□□□ -1.12
CTNND1-236ENST00000533667 DENND4BO75064 1496 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-236ENST00000533667 SDSP20132 328 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 ESYT1Q9BSJ8 1104 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 TFIP11Q9UBB9 837 aaKnown RBP8.04□□□□□ -1.12
CTNND1-236ENST00000533667 PDE1AP54750 535 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 CBX1P83916 185 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 BICDL1Q6ZP65 573 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 BANK1Q8NDB2 785 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 GSTTP1A0A1W2PQM5 241 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 PI4KAP2A4QPH2 592 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 SYKP43405 635 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 CCDC96Q2M329 555 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 CCDC40Q4G0X9 1142 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 GIGYF2Q6Y7W6 1299 aaKnown RBP8.04□□□□□ -1.12
CTNND1-236ENST00000533667 LDHAL6AQ6ZMR3 332 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 HOOK3Q86VS8 718 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 PI4KAP1Q8N8J0 262 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 TRMT1Q9NXH9 659 aaKnown RBP8.04□□□□□ -1.12
CTNND1-236ENST00000533667 TTC41PQ6P2S7 1318 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 BIVM-ERCC5R4GMW8 1640 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 ATP8B2P98198 1209 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 ANKIB1Q9P2G1 1089 aa8.04□□□□□ -1.12
CTNND1-236ENST00000533667 HMGB1P1B2RPK0 211 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms