RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 GIGYF2Q6Y7W6 1299 aaKnown RBP12.09□□□□□ -0.47
ZNF250-209ENST00000533543 COPS6Q7L5N1 327 aa12.09□□□□□ -0.47
ZNF250-209ENST00000533543 NUTM1Q86Y26 1132 aa12.09□□□□□ -0.47
ZNF250-209ENST00000533543 GPBP1L1Q9HC44 474 aaPredicted RBP12.09□□□□□ -0.47
ZNF250-209ENST00000533543 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
ZNF250-209ENST00000533543 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
ZNF250-209ENST00000533543 UBN2Q6ZU65 1347 aa12.09□□□□□ -0.47
ZNF250-209ENST00000533543 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.47
ZNF250-209ENST00000533543 ABCC12Q96J65 1359 aa12.08□□□□□ -0.48
ZNF250-209ENST00000533543 DLEC1Q9Y238 1755 aa12.08□□□□□ -0.48
ZNF250-209ENST00000533543 SUSD4Q5VX71 490 aa12.08□□□□□ -0.48
ZNF250-209ENST00000533543 STYK1Q6J9G0 422 aa12.08□□□□□ -0.48
ZNF250-209ENST00000533543 ZNF34Q8IZ26 560 aa12.08□□□□□ -0.48
ZNF250-209ENST00000533543 CNKSR1Q969H4 720 aa12.08□□□□□ -0.48
ZNF250-209ENST00000533543 MASTLQ96GX5 879 aa12.08□□□□□ -0.48
ZNF250-209ENST00000533543 NYXQ9GZU5 481 aa12.08□□□□□ -0.48
ZNF250-209ENST00000533543 RNF181Q9P0P0 153 aa12.08□□□□□ -0.48
ZNF250-209ENST00000533543 KLRG2A4D1S0 409 aaPredicted RBP12.07□□□□□ -0.48
ZNF250-209ENST00000533543 ELL2O00472 640 aaPredicted RBP12.07□□□□□ -0.48
ZNF250-209ENST00000533543 C21orf2O43822 256 aa12.07□□□□□ -0.48
ZNF250-209ENST00000533543 ERFEQ4G0M1 354 aa12.07□□□□□ -0.48
ZNF250-209ENST00000533543 NFKBIEO00221 500 aa12.06□□□□□ -0.48
ZNF250-209ENST00000533543 NTSR2O95665 410 aa12.06□□□□□ -0.48
ZNF250-209ENST00000533543 NPR1P16066 1061 aa12.06□□□□□ -0.48
ZNF250-209ENST00000533543 PRELPP51888 382 aa12.06□□□□□ -0.48
ZNF250-209ENST00000533543 CCDC27Q2M243 656 aa12.06□□□□□ -0.48
ZNF250-209ENST00000533543 PARP10Q53GL7 1025 aa12.06□□□□□ -0.48
ZNF250-209ENST00000533543 PRPF40BQ6NWY9 871 aaKnown RBP12.06□□□□□ -0.48
ZNF250-209ENST00000533543 WWC1Q8IX03 1113 aa12.06□□□□□ -0.48
ZNF250-209ENST00000533543 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
ZNF250-209ENST00000533543 NUP98P52948 1817 aa12.06□□□□□ -0.48
ZNF250-209ENST00000533543 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
ZNF250-209ENST00000533543 C1QTNF8P60827 252 aa12.05□□□□□ -0.48
ZNF250-209ENST00000533543 FAM9BQ8IZU0 186 aa12.05□□□□□ -0.48
ZNF250-209ENST00000533543 C8orf58Q8NAV2 365 aa12.05□□□□□ -0.48
ZNF250-209ENST00000533543 TSR2Q969E8 191 aaKnown RBP12.05□□□□□ -0.48
ZNF250-209ENST00000533543 DBF4Q9UBU7 674 aaPredicted RBP12.05□□□□□ -0.48
ZNF250-209ENST00000533543 LMNB1P20700 586 aa12.04□□□□□ -0.48
ZNF250-209ENST00000533543 CLCN6P51797 869 aa12.04□□□□□ -0.48
ZNF250-209ENST00000533543 HSP90AB3PQ58FF7 597 aa12.04□□□□□ -0.48
ZNF250-209ENST00000533543 PPP1R42Q7Z4L9 355 aa12.04□□□□□ -0.48
ZNF250-209ENST00000533543 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
ZNF250-209ENST00000533543 UTP14AQ9BVJ6 771 aaKnown RBP12.04□□□□□ -0.48
ZNF250-209ENST00000533543 HYPKQ9NX55 129 aa12.04□□□□□ -0.48
ZNF250-209ENST00000533543 TNRC6CQ9HCJ0 1690 aaKnown RBP12.03□□□□□ -0.48
ZNF250-209ENST00000533543 SLX4Q8IY92 1834 aa12.03□□□□□ -0.48
ZNF250-209ENST00000533543 TCIRG1Q13488 830 aa12.03□□□□□ -0.48
ZNF250-209ENST00000533543 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
ZNF250-209ENST00000533543 C3orf67Q6ZVT6 689 aa12.03□□□□□ -0.48
ZNF250-209ENST00000533543 NLRP10Q86W26 655 aa12.03□□□□□ -0.48
ZNF250-209ENST00000533543 TSPYL6Q8N831 410 aa12.03□□□□□ -0.48
ZNF250-209ENST00000533543 PLBD2Q8NHP8 589 aa12.03□□□□□ -0.48
ZNF250-209ENST00000533543 C7orf43Q8WVR3 580 aa12.03□□□□□ -0.48
ZNF250-209ENST00000533543 ZNF428Q96B54 188 aa12.03□□□□□ -0.48
ZNF250-209ENST00000533543 KIF3CO14782 793 aa12.02□□□□□ -0.49
ZNF250-209ENST00000533543 SOGA3Q5TF21 947 aa12.02□□□□□ -0.49
ZNF250-209ENST00000533543 OLFM4Q6UX06 510 aa12.02□□□□□ -0.49
ZNF250-209ENST00000533543 ANKRD13DQ6ZTN6 518 aa12.02□□□□□ -0.49
ZNF250-209ENST00000533543 TAOK3Q9H2K8 898 aa12.02□□□□□ -0.49
ZNF250-209ENST00000533543 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.49
ZNF250-209ENST00000533543 NMRK2Q9NPI5 230 aa12.02□□□□□ -0.49
ZNF250-209ENST00000533543 RIC1Q4ADV7 1423 aa12.02□□□□□ -0.49
ZNF250-209ENST00000533543 ATP5J2-PTCD1G3V325 749 aa12.01□□□□□ -0.49
ZNF250-209ENST00000533543 ALDH1B1P30837 517 aa12.01□□□□□ -0.49
ZNF250-209ENST00000533543 CCDC93Q567U6 631 aa12.01□□□□□ -0.49
ZNF250-209ENST00000533543 SYNE4Q8N205 404 aa12.01□□□□□ -0.49
ZNF250-209ENST00000533543 RPGRQ92834 1020 aaKnown RBP12.01□□□□□ -0.49
ZNF250-209ENST00000533543 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
ZNF250-209ENST00000533543 IL16Q14005 1332 aa12.01□□□□□ -0.49
ZNF250-209ENST00000533543 SBF1O95248 1867 aa12.01□□□□□ -0.49
ZNF250-209ENST00000533543 TCERG1O14776 1098 aaKnown RBP12□□□□□ -0.49
ZNF250-209ENST00000533543 HCLS1P14317 486 aaPredicted RBP12□□□□□ -0.49
ZNF250-209ENST00000533543 GOLGA2Q08379 1002 aa12□□□□□ -0.49
ZNF250-209ENST00000533543 SLC10A5Q5PT55 438 aa12□□□□□ -0.49
ZNF250-209ENST00000533543 CCDC30Q5VVM6 783 aa12□□□□□ -0.49
ZNF250-209ENST00000533543 NLRP3Q96P20 1036 aa12□□□□□ -0.49
ZNF250-209ENST00000533543 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
ZNF250-209ENST00000533543 TRMT112Q9UI30 125 aaKnown RBP12□□□□□ -0.49
ZNF250-209ENST00000533543 LTBP3Q9NS15 1303 aa12□□□□□ -0.49
ZNF250-209ENST00000533543 FANCIQ9NVI1 1328 aa12□□□□□ -0.49
ZNF250-209ENST00000533543 CACNA1SQ13698 1873 aa12□□□□□ -0.49
ZNF250-209ENST00000533543 HOXA10P31260 410 aaPredicted RBP11.99□□□□□ -0.49
ZNF250-209ENST00000533543 TWISTNBQ3B726 338 aaPredicted RBP11.99□□□□□ -0.49
ZNF250-209ENST00000533543 RIC3Q7Z5B4 369 aa11.99□□□□□ -0.49
ZNF250-209ENST00000533543 SLC51AQ86UW1 340 aa11.99□□□□□ -0.49
ZNF250-209ENST00000533543 WDR63Q8IWG1 891 aa11.99□□□□□ -0.49
ZNF250-209ENST00000533543 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
ZNF250-209ENST00000533543 RNF123Q5XPI4 1314 aa11.99□□□□□ -0.49
ZNF250-209ENST00000533543 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
ZNF250-209ENST00000533543 SH3TC1Q8TE82 1336 aa11.99□□□□□ -0.49
ZNF250-209ENST00000533543 ZC3H4Q9UPT8 1303 aaKnown RBP11.99□□□□□ -0.49
ZNF250-209ENST00000533543 ARFGEF2Q9Y6D5 1785 aa11.99□□□□□ -0.49
ZNF250-209ENST00000533543 FER1L6Q2WGJ9 1857 aa11.99□□□□□ -0.49
ZNF250-209ENST00000533543 ANKRD36CQ5JPF3 1778 aa11.98□□□□□ -0.49
ZNF250-209ENST00000533543 FKBP4Q02790 459 aaKnown RBP eCLIP11.98□□□□□ -0.49
ZNF250-209ENST00000533543 CRAMP1Q96RY5 1269 aa11.98□□□□□ -0.49
ZNF250-209ENST00000533543 CHMP4AQ9BY43 222 aa11.98□□□□□ -0.49
ZNF250-209ENST00000533543 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
ZNF250-209ENST00000533543 ZNF277Q9NRM2 450 aaPredicted RBP11.98□□□□□ -0.49
ZNF250-209ENST00000533543 PPEF1O14829 653 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms