RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 GADD45BO75293 160 aaPredicted RBP21.62■■□□□ 1.05
UBXN1-213ENST00000532904 NBPF7P0C2Y1 421 aaPredicted RBP21.62■■□□□ 1.05
UBXN1-213ENST00000532904 MTX1Q13505 466 aa21.62■■□□□ 1.05
UBXN1-213ENST00000532904 LARP1Q6PKG0 1096 aaKnown RBP21.61■■□□□ 1.05
UBXN1-213ENST00000532904 LTBP4Q8N2S1 1624 aa21.61■■□□□ 1.05
UBXN1-213ENST00000532904 UTYO14607 1347 aa21.61■■□□□ 1.05
UBXN1-213ENST00000532904 PPP1R42Q7Z4L9 355 aa21.6■■□□□ 1.05
UBXN1-213ENST00000532904 RHPN1Q8TCX5 695 aa21.6■■□□□ 1.05
UBXN1-213ENST00000532904 SURF6O75683 361 aaKnown RBP21.6■■□□□ 1.05
UBXN1-213ENST00000532904 TTC14Q96N46 770 aa21.6■■□□□ 1.05
UBXN1-213ENST00000532904 UVSSAQ2YD98 709 aa21.59■■□□□ 1.05
UBXN1-213ENST00000532904 GDPD2Q9HCC8 539 aa21.59■■□□□ 1.05
UBXN1-213ENST00000532904 SNX14Q9Y5W7 946 aa21.59■■□□□ 1.05
UBXN1-213ENST00000532904 FAM184AQ8NB25 1140 aa21.59■■□□□ 1.05
UBXN1-213ENST00000532904 KIF1BPQ96EK5 621 aa21.59■■□□□ 1.05
UBXN1-213ENST00000532904 LSG1Q9H089 658 aaKnown RBP21.59■■□□□ 1.05
UBXN1-213ENST00000532904 STRN4Q9NRL3 753 aa21.59■■□□□ 1.05
UBXN1-213ENST00000532904 LRP10Q7Z4F1 713 aa21.58■■□□□ 1.05
UBXN1-213ENST00000532904 USP16Q9Y5T5 823 aa21.57■■□□□ 1.04
UBXN1-213ENST00000532904 FOXD4L6Q3SYB3 417 aaPredicted RBP21.57■■□□□ 1.04
UBXN1-213ENST00000532904 HSP90AB4PQ58FF6 505 aa21.57■■□□□ 1.04
UBXN1-213ENST00000532904 FOXD4L3Q6VB84 417 aaPredicted RBP21.57■■□□□ 1.04
UBXN1-213ENST00000532904 CNTROBQ8N137 903 aa21.57■■□□□ 1.04
UBXN1-213ENST00000532904 C9orf78Q9NZ63 289 aaPredicted RBP21.57■■□□□ 1.04
UBXN1-213ENST00000532904 SRGAP3O43295 1099 aa21.56■■□□□ 1.04
UBXN1-213ENST00000532904 MAP4K4O95819 1239 aaPredicted RBP21.56■■□□□ 1.04
UBXN1-213ENST00000532904 ZSCAN22P10073 491 aaPredicted RBP21.56■■□□□ 1.04
UBXN1-213ENST00000532904 CCDC183Q5T5S1 534 aa21.56■■□□□ 1.04
UBXN1-213ENST00000532904 USP42Q9H9J4 1324 aaKnown RBP21.56■■□□□ 1.04
UBXN1-213ENST00000532904 PLCH1Q4KWH8 1693 aa21.56■■□□□ 1.04
UBXN1-213ENST00000532904 KCPQ6ZWJ8 1503 aa21.55■■□□□ 1.04
UBXN1-213ENST00000532904 AK2P54819 239 aa21.55■■□□□ 1.04
UBXN1-213ENST00000532904 RIC3Q7Z5B4 369 aa21.55■■□□□ 1.04
UBXN1-213ENST00000532904 VSIG10Q8N0Z9 540 aa21.55■■□□□ 1.04
UBXN1-213ENST00000532904 XAGE3Q8WTP9 111 aa21.55■■□□□ 1.04
UBXN1-213ENST00000532904 LIMCH1Q9UPQ0 1083 aa21.55■■□□□ 1.04
UBXN1-213ENST00000532904 TNS2Q63HR2 1409 aa21.55■■□□□ 1.04
UBXN1-213ENST00000532904 UQCRHLA0A096LP55 91 aa21.54■■□□□ 1.04
UBXN1-213ENST00000532904 GRM8O00222 908 aa21.54■■□□□ 1.04
UBXN1-213ENST00000532904 LETM1O95202 739 aaPredicted RBP21.54■■□□□ 1.04
UBXN1-213ENST00000532904 PTMAP06454 111 aaKnown RBP21.54■■□□□ 1.04
UBXN1-213ENST00000532904 UQCRHP07919 91 aa21.54■■□□□ 1.04
UBXN1-213ENST00000532904 NEXNQ0ZGT2 675 aa21.54■■□□□ 1.04
UBXN1-213ENST00000532904 METTL22Q9BUU2 404 aaPredicted RBP21.54■■□□□ 1.04
UBXN1-213ENST00000532904 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.54■■□□□ 1.04
UBXN1-213ENST00000532904 COL16A1Q07092 1604 aaPredicted RBP21.54■■□□□ 1.04
UBXN1-213ENST00000532904 AIMP1Q12904 312 aaKnown RBP21.54■■□□□ 1.04
UBXN1-213ENST00000532904 RUFY3Q7L099 469 aa21.54■■□□□ 1.04
UBXN1-213ENST00000532904 COPS6Q7L5N1 327 aa21.54■■□□□ 1.04
UBXN1-213ENST00000532904 RASEFQ8IZ41 740 aa21.54■■□□□ 1.04
UBXN1-213ENST00000532904 MAP7D2Q96T17 732 aa21.54■■□□□ 1.04
UBXN1-213ENST00000532904 BTG4Q9NY30 223 aa21.54■■□□□ 1.04
UBXN1-213ENST00000532904 TOGARAM1Q9Y4F4 1720 aa21.53■■□□□ 1.04
UBXN1-213ENST00000532904 MYL6BP14649 208 aa21.53■■□□□ 1.04
UBXN1-213ENST00000532904 CWF19L2Q2TBE0 894 aaKnown RBP21.53■■□□□ 1.04
UBXN1-213ENST00000532904 SASS6Q6UVJ0 657 aa21.53■■□□□ 1.04
UBXN1-213ENST00000532904 CNPY2Q9Y2B0 182 aa21.53■■□□□ 1.04
UBXN1-213ENST00000532904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.53■■□□□ 1.04
UBXN1-213ENST00000532904 ARFGEF2Q9Y6D5 1785 aa21.53■■□□□ 1.04
UBXN1-213ENST00000532904 STX6O43752 255 aa21.52■■□□□ 1.04
UBXN1-213ENST00000532904 KIAA2012Q0VF49 1180 aa21.52■■□□□ 1.04
UBXN1-213ENST00000532904 ANKRD13DQ6ZTN6 518 aa21.52■■□□□ 1.04
UBXN1-213ENST00000532904 KLHL34Q8N239 644 aa21.52■■□□□ 1.04
UBXN1-213ENST00000532904 DISP2A7MBM2 1401 aa21.52■■□□□ 1.04
UBXN1-213ENST00000532904 IGKV5-2P06315 115 aa21.52■■□□□ 1.04
UBXN1-213ENST00000532904 SYT1P21579 422 aa21.52■■□□□ 1.04
UBXN1-213ENST00000532904 UBE2HP62256 183 aa21.52■■□□□ 1.04
UBXN1-213ENST00000532904 TTC41PQ6P2S7 1318 aa21.52■■□□□ 1.03
UBXN1-213ENST00000532904 DYNC1I1O14576 645 aa21.51■■□□□ 1.03
UBXN1-213ENST00000532904 RBM10P98175 930 aaKnown RBP21.51■■□□□ 1.03
UBXN1-213ENST00000532904 NEURL1BA8MQ27 555 aa21.51■■□□□ 1.03
UBXN1-213ENST00000532904 F13A1P00488 732 aa21.51■■□□□ 1.03
UBXN1-213ENST00000532904 DDX54Q8TDD1 881 aaKnown RBP21.51■■□□□ 1.03
UBXN1-213ENST00000532904 TCHHQ07283 1943 aa21.5■■□□□ 1.03
UBXN1-213ENST00000532904 SMC3Q9UQE7 1217 aa21.5■■□□□ 1.03
UBXN1-213ENST00000532904 ATP6V1DQ9Y5K8 247 aa21.5■■□□□ 1.03
UBXN1-213ENST00000532904 AFDNP55196 1824 aaKnown RBP21.5■■□□□ 1.03
UBXN1-213ENST00000532904 WNK3Q9BYP7 1800 aa21.5■■□□□ 1.03
UBXN1-213ENST00000532904 COL15A1P39059 1388 aa21.5■■□□□ 1.03
UBXN1-213ENST00000532904 GLRX3O76003 335 aaKnown RBP21.49■■□□□ 1.03
UBXN1-213ENST00000532904 LRP6O75581 1613 aa21.49■■□□□ 1.03
UBXN1-213ENST00000532904 GCKRQ14397 625 aa21.49■■□□□ 1.03
UBXN1-213ENST00000532904 CWC27Q6UX04 472 aaKnown RBP21.49■■□□□ 1.03
UBXN1-213ENST00000532904 ERC1Q8IUD2 1116 aa21.48■■□□□ 1.03
UBXN1-213ENST00000532904 PLBD2Q8NHP8 589 aa21.48■■□□□ 1.03
UBXN1-213ENST00000532904 PHLPP1O60346 1717 aa21.48■■□□□ 1.03
UBXN1-213ENST00000532904 RUFY2Q8WXA3 655 aa21.48■■□□□ 1.03
UBXN1-213ENST00000532904 FAM13BQ9NYF5 915 aa21.48■■□□□ 1.03
UBXN1-213ENST00000532904 CASTP20810 708 aaKnown RBP21.47■■□□□ 1.03
UBXN1-213ENST00000532904 KCNB2Q92953 911 aa21.47■■□□□ 1.03
UBXN1-213ENST00000532904 KAZALD1Q96I82 304 aa21.47■■□□□ 1.03
UBXN1-213ENST00000532904 SUCLG2Q96I99 432 aa21.47■■□□□ 1.03
UBXN1-213ENST00000532904 USP25Q9UHP3 1055 aa21.47■■□□□ 1.03
UBXN1-213ENST00000532904 NUP188Q5SRE5 1749 aa21.47■■□□□ 1.03
UBXN1-213ENST00000532904 ITGB4P16144 1822 aa21.47■■□□□ 1.03
UBXN1-213ENST00000532904 VPS53Q5VIR6 699 aa21.46■■□□□ 1.03
UBXN1-213ENST00000532904 MYD88Q99836 296 aa21.46■■□□□ 1.03
UBXN1-213ENST00000532904 TM6SF1Q9BZW5 370 aa21.46■■□□□ 1.03
UBXN1-213ENST00000532904 DIAPH3Q9NSV4 1193 aa21.46■■□□□ 1.03
UBXN1-213ENST00000532904 LARGE1O95461 756 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms