RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 PRPF40BQ6NWY9 871 aaKnown RBP18.59■□□□□ 0.57
PUF60-220ENST00000532884 SYNE4Q8N205 404 aa18.59■□□□□ 0.57
PUF60-220ENST00000532884 ZNF526Q8TF50 670 aaPredicted RBP18.59■□□□□ 0.57
PUF60-220ENST00000532884 KLRG2A4D1S0 409 aaPredicted RBP18.58■□□□□ 0.56
PUF60-220ENST00000532884 VAMP4O75379 141 aa18.58■□□□□ 0.56
PUF60-220ENST00000532884 DDX58O95786 925 aaKnown RBP18.58■□□□□ 0.56
PUF60-220ENST00000532884 RASSF7Q02833 373 aa18.58■□□□□ 0.56
PUF60-220ENST00000532884 HCLS1P14317 486 aaPredicted RBP18.57■□□□□ 0.56
PUF60-220ENST00000532884 RTL5Q5HYW3 569 aaPredicted RBP18.57■□□□□ 0.56
PUF60-220ENST00000532884 C9orf131Q5VYM1 1079 aa18.57■□□□□ 0.56
PUF60-220ENST00000532884 G2E3Q7L622 706 aa18.57■□□□□ 0.56
PUF60-220ENST00000532884 RPGRQ92834 1020 aaKnown RBP18.57■□□□□ 0.56
PUF60-220ENST00000532884 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
PUF60-220ENST00000532884 ZNF521Q96K83 1311 aa18.56■□□□□ 0.56
PUF60-220ENST00000532884 C3orf67Q6ZVT6 689 aa18.56■□□□□ 0.56
PUF60-220ENST00000532884 NLRP3Q96P20 1036 aa18.56■□□□□ 0.56
PUF60-220ENST00000532884 MYD88Q99836 296 aa18.56■□□□□ 0.56
PUF60-220ENST00000532884 ISCA1Q9BUE6 129 aa18.56■□□□□ 0.56
PUF60-220ENST00000532884 RNF181Q9P0P0 153 aa18.56■□□□□ 0.56
PUF60-220ENST00000532884 COL11A2P13942 1736 aaPredicted RBP18.56■□□□□ 0.56
PUF60-220ENST00000532884 FAM89AQ96GI7 184 aa18.55■□□□□ 0.56
PUF60-220ENST00000532884 MAP3K2Q9Y2U5 619 aa18.55■□□□□ 0.56
PUF60-220ENST00000532884 SH3TC1Q8TE82 1336 aa18.54■□□□□ 0.56
PUF60-220ENST00000532884 PI4KAP2A4QPH2 592 aa18.54■□□□□ 0.56
PUF60-220ENST00000532884 ALDH1B1P30837 517 aa18.54■□□□□ 0.56
PUF60-220ENST00000532884 CRY2Q49AN0 593 aa18.54■□□□□ 0.56
PUF60-220ENST00000532884 SLC10A5Q5PT55 438 aa18.54■□□□□ 0.56
PUF60-220ENST00000532884 PI4KAP1Q8N8J0 262 aa18.54■□□□□ 0.56
PUF60-220ENST00000532884 DLEC1Q9Y238 1755 aa18.54■□□□□ 0.56
PUF60-220ENST00000532884 ARFGEF1Q9Y6D6 1849 aa18.53■□□□□ 0.56
PUF60-220ENST00000532884 OLFM4Q6UX06 510 aa18.53■□□□□ 0.56
PUF60-220ENST00000532884 KSR2Q6VAB6 950 aa18.53■□□□□ 0.56
PUF60-220ENST00000532884 CDCA7LQ96GN5 454 aa18.53■□□□□ 0.56
PUF60-220ENST00000532884 NFKBIEO00221 500 aa18.52■□□□□ 0.56
PUF60-220ENST00000532884 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
PUF60-220ENST00000532884 RBM17Q96I25 401 aaKnown RBP18.52■□□□□ 0.56
PUF60-220ENST00000532884 METTL22Q9BUU2 404 aaPredicted RBP18.52■□□□□ 0.56
PUF60-220ENST00000532884 TNRC6CQ9HCJ0 1690 aaKnown RBP18.52■□□□□ 0.56
PUF60-220ENST00000532884 RNF123Q5XPI4 1314 aa18.51■□□□□ 0.55
PUF60-220ENST00000532884 E9PSI1 815 aa18.51■□□□□ 0.55
PUF60-220ENST00000532884 FLIIQ13045 1269 aa18.51■□□□□ 0.55
PUF60-220ENST00000532884 TRIM28Q13263 835 aaKnown RBP18.51■□□□□ 0.55
PUF60-220ENST00000532884 FKBP5Q13451 457 aaPredicted RBP18.51■□□□□ 0.55
PUF60-220ENST00000532884 C7orf43Q8WVR3 580 aa18.51■□□□□ 0.55
PUF60-220ENST00000532884 GPBP1L1Q9HC44 474 aaPredicted RBP18.51■□□□□ 0.55
PUF60-220ENST00000532884 SLX4Q8IY92 1834 aa18.51■□□□□ 0.55
PUF60-220ENST00000532884 LMNB1P20700 586 aa18.5■□□□□ 0.55
PUF60-220ENST00000532884 HOXA10P31260 410 aaPredicted RBP18.5■□□□□ 0.55
PUF60-220ENST00000532884 PRELPP51888 382 aa18.5■□□□□ 0.55
PUF60-220ENST00000532884 SOGA3Q5TF21 947 aa18.5■□□□□ 0.55
PUF60-220ENST00000532884 ADCY9O60503 1353 aa18.5■□□□□ 0.55
PUF60-220ENST00000532884 IRS4O14654 1257 aaPredicted RBP18.49■□□□□ 0.55
PUF60-220ENST00000532884 SLFN5Q08AF3 891 aa18.49■□□□□ 0.55
PUF60-220ENST00000532884 NEXNQ0ZGT2 675 aa18.49■□□□□ 0.55
PUF60-220ENST00000532884 CCDC93Q567U6 631 aa18.49■□□□□ 0.55
PUF60-220ENST00000532884 CCDC191Q8NCU4 936 aa18.49■□□□□ 0.55
PUF60-220ENST00000532884 CRAMP1Q96RY5 1269 aa18.49■□□□□ 0.55
PUF60-220ENST00000532884 TAOK3Q9H2K8 898 aa18.49■□□□□ 0.55
PUF60-220ENST00000532884 CWC25Q9NXE8 425 aaPredicted RBP18.49■□□□□ 0.55
PUF60-220ENST00000532884 ANKRD36CQ5JPF3 1778 aa18.49■□□□□ 0.55
PUF60-220ENST00000532884 ZBTB38Q8NAP3 1195 aaPredicted RBP18.48■□□□□ 0.55
PUF60-220ENST00000532884 RIC1Q4ADV7 1423 aa18.48■□□□□ 0.55
PUF60-220ENST00000532884 CACNA1SQ13698 1873 aa18.48■□□□□ 0.55
PUF60-220ENST00000532884 ARFGEF2Q9Y6D5 1785 aa18.47■□□□□ 0.55
PUF60-220ENST00000532884 PPEF1O14829 653 aaPredicted RBP18.47■□□□□ 0.55
PUF60-220ENST00000532884 IGKV5-2P06315 115 aa18.47■□□□□ 0.55
PUF60-220ENST00000532884 CWF19L2Q2TBE0 894 aaKnown RBP18.47■□□□□ 0.55
PUF60-220ENST00000532884 DDX46Q7L014 1031 aaKnown RBP18.47■□□□□ 0.55
PUF60-220ENST00000532884 SLC51AQ86UW1 340 aa18.47■□□□□ 0.55
PUF60-220ENST00000532884 F6X3S4 739 aa18.46■□□□□ 0.55
PUF60-220ENST00000532884 RTKN2Q8IZC4 609 aa18.46■□□□□ 0.55
PUF60-220ENST00000532884 ABCC4O15439 1325 aa18.46■□□□□ 0.55
PUF60-220ENST00000532884 DNAAF4Q8WXU2 420 aa18.45■□□□□ 0.54
PUF60-220ENST00000532884 TMX4Q9H1E5 349 aaPredicted RBP18.45■□□□□ 0.54
PUF60-220ENST00000532884 ZNF277Q9NRM2 450 aaPredicted RBP18.45■□□□□ 0.54
PUF60-220ENST00000532884 NEURL1BA8MQ27 555 aa18.44■□□□□ 0.54
PUF60-220ENST00000532884 PCCAP05165 728 aaPredicted RBP18.44■□□□□ 0.54
PUF60-220ENST00000532884 FKBP4Q02790 459 aaKnown RBP eCLIP18.44■□□□□ 0.54
PUF60-220ENST00000532884 CCDC85AQ96PX6 553 aaPredicted RBP18.44■□□□□ 0.54
PUF60-220ENST00000532884 HNRNPUQ00839 825 aaKnown RBP eCLIP18.43■□□□□ 0.54
PUF60-220ENST00000532884 LTBP3Q9NS15 1303 aa18.43■□□□□ 0.54
PUF60-220ENST00000532884 BBOX1O75936 387 aa18.42■□□□□ 0.54
PUF60-220ENST00000532884 HSP90B1P14625 803 aaKnown RBP18.42■□□□□ 0.54
PUF60-220ENST00000532884 GRAPQ13588 217 aa18.42■□□□□ 0.54
PUF60-220ENST00000532884 SF3B3Q15393 1217 aaKnown RBP18.42■□□□□ 0.54
PUF60-220ENST00000532884 CC2D2BQ6DHV5 1058 aa18.42■□□□□ 0.54
PUF60-220ENST00000532884 GRAPLQ8TC17 118 aaPredicted RBP18.42■□□□□ 0.54
PUF60-220ENST00000532884 BCL2L13Q9BXK5 485 aa18.42■□□□□ 0.54
PUF60-220ENST00000532884 NMRK2Q9NPI5 230 aa18.42■□□□□ 0.54
PUF60-220ENST00000532884 PDE8AO60658 829 aa18.41■□□□□ 0.54
PUF60-220ENST00000532884 SLC4A10Q6U841 1118 aa18.41■□□□□ 0.54
PUF60-220ENST00000532884 UBE3BQ7Z3V4 1068 aa18.41■□□□□ 0.54
PUF60-220ENST00000532884 ATP6V0A2Q9Y487 856 aa18.41■□□□□ 0.54
PUF60-220ENST00000532884 KDM2BQ8NHM5 1336 aa18.41■□□□□ 0.54
PUF60-220ENST00000532884 SBF1O95248 1867 aa18.4■□□□□ 0.54
PUF60-220ENST00000532884 GCKRQ14397 625 aa18.4■□□□□ 0.54
PUF60-220ENST00000532884 TRMT2AQ8IZ69 625 aaKnown RBP18.4■□□□□ 0.54
PUF60-220ENST00000532884 MRPL50Q8N5N7 158 aaKnown RBP18.4■□□□□ 0.54
PUF60-220ENST00000532884 LINS1Q8NG48 757 aa18.4■□□□□ 0.54
PUF60-220ENST00000532884 SSH1Q8WYL5 1049 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms