RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CEP131Q9UPN4 1083 aa17.89■□□□□ 0.45
PCDHA3-202ENST00000532566 KIAA0232Q92628 1395 aa17.89■□□□□ 0.45
PCDHA3-202ENST00000532566 OFD1O75665 1012 aa17.89■□□□□ 0.45
PCDHA3-202ENST00000532566 HAND2P61296 217 aa17.89■□□□□ 0.45
PCDHA3-202ENST00000532566 STIM1Q13586 685 aa17.89■□□□□ 0.45
PCDHA3-202ENST00000532566 PPFIBP1Q86W92 1011 aa17.89■□□□□ 0.45
PCDHA3-202ENST00000532566 RNF41Q9H4P4 317 aaPredicted RBP17.89■□□□□ 0.45
PCDHA3-202ENST00000532566 NAP1L1P55209 391 aaKnown RBP17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 RBM10P98175 930 aaKnown RBP17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 SLC12A7Q9Y666 1083 aa17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 XRCC6P12956 609 aaKnown RBP eCLIP17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 ATP2B2Q01814 1243 aa17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 USP16Q9Y5T5 823 aa17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 IFIT3O14879 490 aaKnown RBP17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 ZFYP08048 801 aaPredicted RBP17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 EPS15P42566 896 aa17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 PLEKHF1Q96S99 279 aa17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 KIF1BO60333 1816 aa17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 UQCRHLA0A096LP55 91 aa17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 UQCRHP07919 91 aa17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 TTLL5Q6EMB2 1281 aa17.88■□□□□ 0.45
PCDHA3-202ENST00000532566 MCMDC2Q4G0Z9 681 aa17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 IQGAP3Q86VI3 1631 aa17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 NMIQ13287 307 aaPredicted RBP17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 LRSAM1Q6UWE0 723 aa17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 ABCC4O15439 1325 aa17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 GOLGA8AA7E2F4 631 aa17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 ZPR1O75312 459 aa17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 ZGPATQ8N5A5 531 aaKnown RBP17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 INTS4Q96HW7 963 aaKnown RBP17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 ORC3Q9UBD5 711 aaPredicted RBP17.87■□□□□ 0.45
PCDHA3-202ENST00000532566 ARHGEF10O15013 1369 aa17.86■□□□□ 0.45
PCDHA3-202ENST00000532566 TNNT3P45378 269 aaPredicted RBP17.86■□□□□ 0.45
PCDHA3-202ENST00000532566 IQCA1Q86XH1 822 aa17.86■□□□□ 0.45
PCDHA3-202ENST00000532566 NCOA7Q8NI08 942 aa17.86■□□□□ 0.45
PCDHA3-202ENST00000532566 FSIP1Q8NA03 581 aa17.86■□□□□ 0.45
PCDHA3-202ENST00000532566 LTKP29376 864 aa17.86■□□□□ 0.45
PCDHA3-202ENST00000532566 ZSCAN16Q9H4T2 348 aaPredicted RBP17.86■□□□□ 0.45
PCDHA3-202ENST00000532566 CCAR1Q8IX12 1150 aaKnown RBP17.86■□□□□ 0.45
PCDHA3-202ENST00000532566 CCDC82Q8N4S0 544 aa17.86■□□□□ 0.45
PCDHA3-202ENST00000532566 KIF24Q5T7B8 1368 aa17.85■□□□□ 0.45
PCDHA3-202ENST00000532566 ATP2B3Q16720 1220 aa17.85■□□□□ 0.45
PCDHA3-202ENST00000532566 CFAP100Q494V2 611 aa17.85■□□□□ 0.45
PCDHA3-202ENST00000532566 CDC5LQ99459 802 aaKnown RBP17.85■□□□□ 0.45
PCDHA3-202ENST00000532566 UQCRFS1P1P0C7P4 283 aa17.85■□□□□ 0.45
PCDHA3-202ENST00000532566 PIBF1Q8WXW3 757 aa17.85■□□□□ 0.45
PCDHA3-202ENST00000532566 ACBD3Q9H3P7 528 aa17.85■□□□□ 0.45
PCDHA3-202ENST00000532566 TET3O43151 1660 aa17.85■□□□□ 0.45
PCDHA3-202ENST00000532566 KAT6BQ8WYB5 2073 aa17.85■□□□□ 0.45
PCDHA3-202ENST00000532566 USP19O94966 1318 aa17.85■□□□□ 0.45
PCDHA3-202ENST00000532566 MCM5P33992 734 aa17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 CTCFLQ8NI51 663 aaPredicted RBP17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 AK2P54819 239 aa17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 LGR6Q9HBX8 967 aa17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 RANBP6O60518 1105 aaKnown RBP17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 ORAI2Q96SN7 254 aa17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 IL2RBP14784 551 aa17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 IARSP41252 1262 aaKnown RBP17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 UVSSAQ2YD98 709 aa17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 BICC1Q9H694 974 aaKnown RBP17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 ZNHIT6Q9NWK9 470 aaKnown RBP17.84■□□□□ 0.45
PCDHA3-202ENST00000532566 HCLS1P14317 486 aaPredicted RBP17.83■□□□□ 0.45
PCDHA3-202ENST00000532566 ZNF790Q6PG37 636 aa17.83■□□□□ 0.45
PCDHA3-202ENST00000532566 USP48Q86UV5 1035 aa17.83■□□□□ 0.45
PCDHA3-202ENST00000532566 RAD50Q92878 1312 aa17.83■□□□□ 0.44
PCDHA3-202ENST00000532566 F13A1P00488 732 aa17.83■□□□□ 0.44
PCDHA3-202ENST00000532566 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
PCDHA3-202ENST00000532566 ZNF287Q9HBT7 754 aa17.83■□□□□ 0.44
PCDHA3-202ENST00000532566 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.44
PCDHA3-202ENST00000532566 AATKQ6ZMQ8 1374 aa17.83■□□□□ 0.44
PCDHA3-202ENST00000532566 USP5P45974 858 aa17.83■□□□□ 0.44
PCDHA3-202ENST00000532566 HSP90B2PQ58FF3 399 aa17.83■□□□□ 0.44
PCDHA3-202ENST00000532566 AEBP2Q6ZN18 517 aaPredicted RBP17.83■□□□□ 0.44
PCDHA3-202ENST00000532566 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.44
PCDHA3-202ENST00000532566 KRT18P05783 430 aaKnown RBP17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 SFPQP23246 707 aaKnown RBP eCLIP17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 ZNF165P49910 485 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 SSRP1Q08945 709 aaKnown RBP17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 TMEM67Q5HYA8 995 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 MICU3Q86XE3 530 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 DZIP1Q86YF9 867 aaKnown RBP17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 PANK2Q9BZ23 570 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 PNMA6EA0A0J9YXQ4 647 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 ANO8Q9HCE9 1232 aaPredicted RBP17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 BCORL1Q5H9F3 1711 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 ADCY5O95622 1261 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 MKNK2Q9HBH9 465 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 PAG1Q9NWQ8 432 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 METP08581 1390 aa17.82■□□□□ 0.44
PCDHA3-202ENST00000532566 AOX1Q06278 1338 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 PPFIA3O75145 1194 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 CAVIN2O95810 425 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 NBPF6Q5VWK0 638 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 CAGE1Q8TC20 777 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 NBPF4Q96M43 638 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 KLF18A0A0U1RQI7 1052 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 GIMAP6Q6P9H5 292 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms