RNA–Protein interactions for RNA: ENST00000532474.5

RCN1-208, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-208ENST00000532474 ITPK1Q13572 414 aa8.22□□□□□ -1.09
RCN1-208ENST00000532474 SWT1Q5T5J6 900 aaKnown RBP8.22□□□□□ -1.09
RCN1-208ENST00000532474 LINC00116Q8NCU8 138 aa8.22□□□□□ -1.09
RCN1-208ENST00000532474 MTRQ99707 1265 aa8.22□□□□□ -1.09
RCN1-208ENST00000532474 SHANK3Q9BYB0 1731 aa8.22□□□□□ -1.09
RCN1-208ENST00000532474 KDM6AO15550 1401 aaPredicted RBP8.21□□□□□ -1.09
RCN1-208ENST00000532474 HMOX1P09601 288 aa8.21□□□□□ -1.1
RCN1-208ENST00000532474 PTGDRQ13258 359 aa8.21□□□□□ -1.1
RCN1-208ENST00000532474 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.1
RCN1-208ENST00000532474 NFATC2IPQ8NCF5 419 aa8.21□□□□□ -1.1
RCN1-208ENST00000532474 PRR14Q9BWN1 585 aa8.21□□□□□ -1.1
RCN1-208ENST00000532474 NUDCQ9Y266 331 aa8.21□□□□□ -1.1
RCN1-208ENST00000532474 RTCBQ9Y3I0 505 aaKnown RBP8.21□□□□□ -1.1
RCN1-208ENST00000532474 CD2APQ9Y5K6 639 aa8.21□□□□□ -1.1
RCN1-208ENST00000532474 CNTNAP4Q9C0A0 1308 aa8.21□□□□□ -1.1
RCN1-208ENST00000532474 APLP1P51693 650 aa8.2□□□□□ -1.1
RCN1-208ENST00000532474 GPR162Q16538 588 aa8.2□□□□□ -1.1
RCN1-208ENST00000532474 TRAPPC3LQ5T215 181 aa8.2□□□□□ -1.1
RCN1-208ENST00000532474 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
RCN1-208ENST00000532474 GAS2L2Q8NHY3 880 aa8.2□□□□□ -1.1
RCN1-208ENST00000532474 RBM46Q8TBY0 533 aaKnown RBP8.2□□□□□ -1.1
RCN1-208ENST00000532474 SLC52A2Q9HAB3 445 aa8.2□□□□□ -1.1
RCN1-208ENST00000532474 RGPD2P0DJD1 1756 aa8.2□□□□□ -1.1
RCN1-208ENST00000532474 U2SURPO15042 1029 aaKnown RBP8.19□□□□□ -1.1
RCN1-208ENST00000532474 RNMTO43148 476 aaKnown RBP8.19□□□□□ -1.1
RCN1-208ENST00000532474 GRIN3BO60391 1043 aa8.19□□□□□ -1.1
RCN1-208ENST00000532474 RPS6KA4O75676 772 aa8.19□□□□□ -1.1
RCN1-208ENST00000532474 MTHFSDQ2M296 383 aaKnown RBP8.19□□□□□ -1.1
RCN1-208ENST00000532474 AMIGO3Q86WK7 504 aa8.19□□□□□ -1.1
RCN1-208ENST00000532474 NLGN1Q8N2Q7 840 aa8.19□□□□□ -1.1
RCN1-208ENST00000532474 SLC4A9Q96Q91 983 aa8.19□□□□□ -1.1
RCN1-208ENST00000532474 LY75O60449 1722 aa8.19□□□□□ -1.1
RCN1-208ENST00000532474 PTCD1O75127 700 aaKnown RBP8.18□□□□□ -1.1
RCN1-208ENST00000532474 DNAJB2P25686 324 aa8.18□□□□□ -1.1
RCN1-208ENST00000532474 RFC4P35249 363 aa8.18□□□□□ -1.1
RCN1-208ENST00000532474 CNGB1Q14028 1251 aaPredicted RBP8.18□□□□□ -1.1
RCN1-208ENST00000532474 MAP2P11137 1827 aaKnown RBP8.17□□□□□ -1.1
RCN1-208ENST00000532474 GNAT3A8MTJ3 354 aa8.17□□□□□ -1.1
RCN1-208ENST00000532474 FCHSD2O94868 740 aa8.17□□□□□ -1.1
RCN1-208ENST00000532474 PPP2R1AP30153 589 aa8.17□□□□□ -1.1
RCN1-208ENST00000532474 CRKLP46109 303 aaKnown RBP8.17□□□□□ -1.1
RCN1-208ENST00000532474 LAPTM4AQ15012 233 aa8.17□□□□□ -1.1
RCN1-208ENST00000532474 TTC5Q8N0Z6 440 aa8.17□□□□□ -1.1
RCN1-208ENST00000532474 VSIG10Q8N0Z9 540 aa8.17□□□□□ -1.1
RCN1-208ENST00000532474 NLGN2Q8NFZ4 835 aa8.17□□□□□ -1.1
RCN1-208ENST00000532474 LGR6Q9HBX8 967 aa8.17□□□□□ -1.1
RCN1-208ENST00000532474 COL3A1P02461 1466 aaPredicted RBP8.17□□□□□ -1.1
RCN1-208ENST00000532474 TOGARAM1Q9Y4F4 1720 aa8.17□□□□□ -1.1
RCN1-208ENST00000532474 KAT6BQ8WYB5 2073 aa8.17□□□□□ -1.1
RCN1-208ENST00000532474 MMP10P09238 476 aa8.16□□□□□ -1.1
RCN1-208ENST00000532474 C4BP0C0L5 1744 aa8.16□□□□□ -1.1
RCN1-208ENST00000532474 U2AF1L5P0DN76 240 aaPredicted RBP8.16□□□□□ -1.1
RCN1-208ENST00000532474 PRKAR2BP31323 418 aa8.16□□□□□ -1.1
RCN1-208ENST00000532474 GGCXP38435 758 aa8.16□□□□□ -1.1
RCN1-208ENST00000532474 U2AF1Q01081 240 aaKnown RBP eCLIP8.16□□□□□ -1.1
RCN1-208ENST00000532474 TEFQ10587 303 aa8.16□□□□□ -1.1
RCN1-208ENST00000532474 QSER1Q2KHR3 1735 aa8.15□□□□□ -1.1
RCN1-208ENST00000532474 MRC1P22897 1456 aa8.15□□□□□ -1.1
RCN1-208ENST00000532474 STARD3NLO95772 234 aa8.15□□□□□ -1.1
RCN1-208ENST00000532474 SMYD5Q6GMV2 418 aa8.15□□□□□ -1.1
RCN1-208ENST00000532474 PPP1R18Q6NYC8 613 aa8.15□□□□□ -1.1
RCN1-208ENST00000532474 SMIM5Q71RC9 77 aa8.15□□□□□ -1.1
RCN1-208ENST00000532474 ZNF516Q92618 1163 aa8.15□□□□□ -1.1
RCN1-208ENST00000532474 TEX13AQ9BXU3 409 aaPredicted RBP8.15□□□□□ -1.1
RCN1-208ENST00000532474 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
RCN1-208ENST00000532474 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.15□□□□□ -1.1
RCN1-208ENST00000532474 CCDC87Q9NVE4 849 aa8.15□□□□□ -1.1
RCN1-208ENST00000532474 ADGRG1Q9Y653 693 aa8.15□□□□□ -1.1
RCN1-208ENST00000532474 C5P01031 1676 aa8.14□□□□□ -1.11
RCN1-208ENST00000532474 USP42Q9H9J4 1324 aaKnown RBP8.14□□□□□ -1.11
RCN1-208ENST00000532474 SEMA3EO15041 775 aa8.14□□□□□ -1.11
RCN1-208ENST00000532474 HTATSF1O43719 755 aaKnown RBP8.14□□□□□ -1.11
RCN1-208ENST00000532474 NEFMP07197 916 aa8.14□□□□□ -1.11
RCN1-208ENST00000532474 GYS1P13807 737 aa8.14□□□□□ -1.11
RCN1-208ENST00000532474 SLC39A6Q13433 755 aa8.14□□□□□ -1.11
RCN1-208ENST00000532474 INTS5Q6P9B9 1019 aaKnown RBP8.14□□□□□ -1.11
RCN1-208ENST00000532474 DNAJC10Q8IXB1 793 aa8.14□□□□□ -1.11
RCN1-208ENST00000532474 ZNF784Q8NCA9 323 aaPredicted RBP8.14□□□□□ -1.11
RCN1-208ENST00000532474 IL17REQ8NFR9 667 aa8.14□□□□□ -1.11
RCN1-208ENST00000532474 PARP3Q9Y6F1 533 aa8.14□□□□□ -1.11
RCN1-208ENST00000532474 CEMIPQ8WUJ3 1361 aa8.13□□□□□ -1.11
RCN1-208ENST00000532474 SOS1Q07889 1333 aaPredicted RBP8.13□□□□□ -1.11
RCN1-208ENST00000532474 ZPR1O75312 459 aa8.13□□□□□ -1.11
RCN1-208ENST00000532474 CYP19A1P11511 503 aaPredicted RBP8.13□□□□□ -1.11
RCN1-208ENST00000532474 YBX3P16989 372 aaKnown RBP eCLIP8.13□□□□□ -1.11
RCN1-208ENST00000532474 COPS2P61201 443 aa8.13□□□□□ -1.11
RCN1-208ENST00000532474 TGFB2P61812 414 aa8.13□□□□□ -1.11
RCN1-208ENST00000532474 RALBP1Q15311 655 aa8.13□□□□□ -1.11
RCN1-208ENST00000532474 ZNF790Q6PG37 636 aa8.13□□□□□ -1.11
RCN1-208ENST00000532474 RTF1Q92541 710 aaKnown RBP8.13□□□□□ -1.11
RCN1-208ENST00000532474 PHACTR3Q96KR7 559 aa8.13□□□□□ -1.11
RCN1-208ENST00000532474 PNNQ9H307 717 aaKnown RBP8.13□□□□□ -1.11
RCN1-208ENST00000532474 TMEM134Q9H6X4 195 aa8.13□□□□□ -1.11
RCN1-208ENST00000532474 PCDHB3Q9Y5E6 796 aa8.13□□□□□ -1.11
RCN1-208ENST00000532474 V9GY48 417 aaPredicted RBP8.13□□□□□ -1.11
RCN1-208ENST00000532474 ZNF831Q5JPB2 1677 aa8.12□□□□□ -1.11
RCN1-208ENST00000532474 A0A087WZG4 1122 aa8.12□□□□□ -1.11
RCN1-208ENST00000532474 BTBD11A6QL63 1104 aa8.12□□□□□ -1.11
RCN1-208ENST00000532474 OATP04181 439 aa8.12□□□□□ -1.11
RCN1-208ENST00000532474 Q6ZNB5 142 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms