RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 RIMS2Q9UQ26 1411 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 SGSM2O43147 1006 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 KARSQ15046 597 aaKnown RBP12.64□□□□□ -0.39
CHEK1-213ENST00000532449 ST7Q9NRC1 585 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 ATP10AO60312 1499 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 MCM6Q14566 821 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 ARHGAP29Q52LW3 1261 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 CCDC102AQ96A19 550 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.64□□□□□ -0.39
CHEK1-213ENST00000532449 TPCN1Q9ULQ1 816 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 RPGRIP1LQ68CZ1 1315 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 ZNF518AQ6AHZ1 1483 aa12.64□□□□□ -0.39
CHEK1-213ENST00000532449 DUOX2Q9NRD8 1548 aa12.63□□□□□ -0.39
CHEK1-213ENST00000532449 TMCO3Q6UWJ1 677 aa12.63□□□□□ -0.39
CHEK1-213ENST00000532449 TRIM34Q9BYJ4 488 aa12.63□□□□□ -0.39
CHEK1-213ENST00000532449 CFAP45Q9UL16 551 aa12.63□□□□□ -0.39
CHEK1-213ENST00000532449 CHL1O00533 1208 aa12.63□□□□□ -0.39
CHEK1-213ENST00000532449 ERCC6LQ2NKX8 1250 aa12.63□□□□□ -0.39
CHEK1-213ENST00000532449 LMAN1P49257 510 aa12.63□□□□□ -0.39
CHEK1-213ENST00000532449 UVSSAQ2YD98 709 aa12.63□□□□□ -0.39
CHEK1-213ENST00000532449 RAPGEF4Q8WZA2 1011 aa12.63□□□□□ -0.39
CHEK1-213ENST00000532449 MTMR6Q9Y217 621 aa12.63□□□□□ -0.39
CHEK1-213ENST00000532449 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
CHEK1-213ENST00000532449 OLFM4Q6UX06 510 aa12.62□□□□□ -0.39
CHEK1-213ENST00000532449 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
CHEK1-213ENST00000532449 NEK1Q96PY6 1258 aa12.62□□□□□ -0.39
CHEK1-213ENST00000532449 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
CHEK1-213ENST00000532449 ZBTB3Q9H5J0 574 aa12.62□□□□□ -0.39
CHEK1-213ENST00000532449 GNG11P61952 73 aa12.62□□□□□ -0.39
CHEK1-213ENST00000532449 TTC21BQ7Z4L5 1316 aa12.62□□□□□ -0.39
CHEK1-213ENST00000532449 PRAMEF22A3QJZ6 481 aa12.62□□□□□ -0.39
CHEK1-213ENST00000532449 CACTINQ8WUQ7 758 aaKnown RBP12.62□□□□□ -0.39
CHEK1-213ENST00000532449 NOL10Q9BSC4 688 aaKnown RBP12.62□□□□□ -0.39
CHEK1-213ENST00000532449 SH2B1Q9NRF2 756 aaPredicted RBP12.62□□□□□ -0.39
CHEK1-213ENST00000532449 TLR7Q9NYK1 1049 aaKnown RBP12.62□□□□□ -0.39
CHEK1-213ENST00000532449 KRT222Q8N1A0 295 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 ZNF396Q96N95 335 aaPredicted RBP12.61□□□□□ -0.39
CHEK1-213ENST00000532449 SHANK2Q9UPX8 1470 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 INTS4Q96HW7 963 aaKnown RBP12.61□□□□□ -0.39
CHEK1-213ENST00000532449 C8orf76Q96K31 380 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 DDX19AQ9NUU7 478 aaKnown RBP12.61□□□□□ -0.39
CHEK1-213ENST00000532449 SBNO2Q9Y2G9 1366 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 PRDM15P57071 1507 aaPredicted RBP12.61□□□□□ -0.39
CHEK1-213ENST00000532449 RIMBP3CA6NJZ7 1639 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 RIMBP3BA6NNM3 1639 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 RIMBP3Q9UFD9 1639 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 A0A0D9SFI3 127 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 GOLGA8BA8MQT2 603 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 NSD2O96028 1365 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 HSPA4P34932 840 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 NLRP1Q9C000 1473 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 EPC1Q9H2F5 836 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 GJB4Q9NTQ9 266 aa12.61□□□□□ -0.39
CHEK1-213ENST00000532449 FAM170AA1A519 330 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 TIMM10P62072 90 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 LEO1Q8WVC0 666 aaPredicted RBP12.6□□□□□ -0.39
CHEK1-213ENST00000532449 ANO10Q9NW15 660 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 A0A087WZG4 1122 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 SLC3A2P08195 630 aaKnown RBP12.6□□□□□ -0.39
CHEK1-213ENST00000532449 ANAPC15P60006 121 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 ANKRD1Q15327 319 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 ZSCAN25Q6NSZ9 544 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 CPLX2Q6PUV4 134 aaKnown RBP12.6□□□□□ -0.39
CHEK1-213ENST00000532449 PUF60Q9UHX1 559 aaKnown RBP12.6□□□□□ -0.39
CHEK1-213ENST00000532449 HDAC5Q9UQL6 1122 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 CDC42BPBQ9Y5S2 1711 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 EIF2AK4Q9P2K8 1649 aaKnown RBP12.6□□□□□ -0.39
CHEK1-213ENST00000532449 ZNF75DP51815 510 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 STX17P56962 302 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 GPS2Q13227 327 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 LONRF3Q496Y0 759 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 AXDND1Q5T1B0 1012 aaPredicted RBP12.6□□□□□ -0.39
CHEK1-213ENST00000532449 NEK11Q8NG66 645 aa12.6□□□□□ -0.39
CHEK1-213ENST00000532449 RAD50Q92878 1312 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 USP27XA6NNY8 438 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 RAD21O60216 631 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 C10orf67Q8IYJ2 551 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 NOC3LQ8WTT2 800 aaKnown RBP12.59□□□□□ -0.39
CHEK1-213ENST00000532449 EVI5LQ96CN4 794 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 PDLIM2Q96JY6 352 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 GDAP1L1Q96MZ0 367 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 UTP14AQ9BVJ6 771 aaKnown RBP12.59□□□□□ -0.39
CHEK1-213ENST00000532449 BICC1Q9H694 974 aaKnown RBP12.59□□□□□ -0.39
CHEK1-213ENST00000532449 AKAP17AQ02040 695 aaKnown RBP12.59□□□□□ -0.39
CHEK1-213ENST00000532449 CCDC171Q6TFL3 1326 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 ANKRD65E5RJM6 399 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 HSP90B2PQ58FF3 399 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 LZTFL1Q9NQ48 299 aa12.59□□□□□ -0.39
CHEK1-213ENST00000532449 ORC3Q9UBD5 711 aaPredicted RBP12.59□□□□□ -0.39
CHEK1-213ENST00000532449 TOP1P11387 765 aaKnown RBP12.58□□□□□ -0.39
CHEK1-213ENST00000532449 GYS2P54840 703 aa12.58□□□□□ -0.39
CHEK1-213ENST00000532449 NAP1L1P55209 391 aaKnown RBP12.58□□□□□ -0.39
CHEK1-213ENST00000532449 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.39
CHEK1-213ENST00000532449 STX1AQ16623 288 aa12.58□□□□□ -0.39
CHEK1-213ENST00000532449 PREX2Q70Z35 1606 aa12.58□□□□□ -0.4
CHEK1-213ENST00000532449 TRPM1Q7Z4N2 1603 aa12.58□□□□□ -0.4
CHEK1-213ENST00000532449 SLC27A2O14975 620 aa12.58□□□□□ -0.4
CHEK1-213ENST00000532449 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
CHEK1-213ENST00000532449 ERC1Q8IUD2 1116 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms