RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 C21orf2O43822 256 aa22.41■■□□□ 1.18
CTSB-223ENST00000532370 NPR1P16066 1061 aa22.41■■□□□ 1.18
CTSB-223ENST00000532370 CNKSR1Q969H4 720 aa22.41■■□□□ 1.18
CTSB-223ENST00000532370 ISCA1Q9BUE6 129 aa22.41■■□□□ 1.18
CTSB-223ENST00000532370 CRY2Q49AN0 593 aa22.4■■□□□ 1.18
CTSB-223ENST00000532370 PRPF40BQ6NWY9 871 aaKnown RBP22.4■■□□□ 1.18
CTSB-223ENST00000532370 TRMT112Q9UI30 125 aaKnown RBP22.4■■□□□ 1.18
CTSB-223ENST00000532370 NUP98P52948 1817 aa22.4■■□□□ 1.18
CTSB-223ENST00000532370 BRCA1P38398 1863 aaKnown RBP22.39■■□□□ 1.18
CTSB-223ENST00000532370 RASSF7Q02833 373 aa22.39■■□□□ 1.17
CTSB-223ENST00000532370 HCLS1P14317 486 aaPredicted RBP22.38■■□□□ 1.17
CTSB-223ENST00000532370 SLC10A5Q5PT55 438 aa22.38■■□□□ 1.17
CTSB-223ENST00000532370 CDCA7LQ96GN5 454 aa22.38■■□□□ 1.17
CTSB-223ENST00000532370 MYD88Q99836 296 aa22.38■■□□□ 1.17
CTSB-223ENST00000532370 COL11A2P13942 1736 aaPredicted RBP22.37■■□□□ 1.17
CTSB-223ENST00000532370 PI4KAP2A4QPH2 592 aa22.37■■□□□ 1.17
CTSB-223ENST00000532370 C9orf131Q5VYM1 1079 aa22.37■■□□□ 1.17
CTSB-223ENST00000532370 PI4KAP1Q8N8J0 262 aa22.37■■□□□ 1.17
CTSB-223ENST00000532370 FAM89AQ96GI7 184 aa22.37■■□□□ 1.17
CTSB-223ENST00000532370 MAP3K2Q9Y2U5 619 aa22.37■■□□□ 1.17
CTSB-223ENST00000532370 NFKBIEO00221 500 aa22.36■■□□□ 1.17
CTSB-223ENST00000532370 DDX58O95786 925 aaKnown RBP22.36■■□□□ 1.17
CTSB-223ENST00000532370 PRELPP51888 382 aa22.36■■□□□ 1.17
CTSB-223ENST00000532370 TRIM28Q13263 835 aaKnown RBP22.36■■□□□ 1.17
CTSB-223ENST00000532370 RTL5Q5HYW3 569 aaPredicted RBP22.36■■□□□ 1.17
CTSB-223ENST00000532370 OLFM4Q6UX06 510 aa22.36■■□□□ 1.17
CTSB-223ENST00000532370 KSR2Q6VAB6 950 aa22.36■■□□□ 1.17
CTSB-223ENST00000532370 C7orf43Q8WVR3 580 aa22.36■■□□□ 1.17
CTSB-223ENST00000532370 SH3TC1Q8TE82 1336 aa22.35■■□□□ 1.17
CTSB-223ENST00000532370 E9PSI1 815 aa22.35■■□□□ 1.17
CTSB-223ENST00000532370 SLFN5Q08AF3 891 aa22.35■■□□□ 1.17
CTSB-223ENST00000532370 NLRP3Q96P20 1036 aa22.35■■□□□ 1.17
CTSB-223ENST00000532370 METTL22Q9BUU2 404 aaPredicted RBP22.35■■□□□ 1.17
CTSB-223ENST00000532370 ADCY9O60503 1353 aa22.35■■□□□ 1.17
CTSB-223ENST00000532370 HOXA10P31260 410 aaPredicted RBP22.34■■□□□ 1.17
CTSB-223ENST00000532370 FLIIQ13045 1269 aa22.34■■□□□ 1.17
CTSB-223ENST00000532370 RPGRQ92834 1020 aaKnown RBP22.34■■□□□ 1.17
CTSB-223ENST00000532370 RNF123Q5XPI4 1314 aa22.33■■□□□ 1.17
CTSB-223ENST00000532370 TNRC6CQ9HCJ0 1690 aaKnown RBP22.33■■□□□ 1.17
CTSB-223ENST00000532370 RIC1Q4ADV7 1423 aa22.33■■□□□ 1.17
CTSB-223ENST00000532370 ALDH1B1P30837 517 aa22.33■■□□□ 1.17
CTSB-223ENST00000532370 SLC51AQ86UW1 340 aa22.33■■□□□ 1.17
CTSB-223ENST00000532370 ZNF526Q8TF50 670 aaPredicted RBP22.33■■□□□ 1.17
CTSB-223ENST00000532370 RNF181Q9P0P0 153 aa22.33■■□□□ 1.17
CTSB-223ENST00000532370 CHD4Q14839 1912 aa22.33■■□□□ 1.16
CTSB-223ENST00000532370 JARID2Q92833 1246 aaPredicted RBP22.32■■□□□ 1.16
CTSB-223ENST00000532370 DLEC1Q9Y238 1755 aa22.32■■□□□ 1.16
CTSB-223ENST00000532370 IGKV5-2P06315 115 aa22.31■■□□□ 1.16
CTSB-223ENST00000532370 RBM17Q96I25 401 aaKnown RBP22.31■■□□□ 1.16
CTSB-223ENST00000532370 ARFGEF1Q9Y6D6 1849 aa22.3■■□□□ 1.16
CTSB-223ENST00000532370 FKBP5Q13451 457 aaPredicted RBP22.3■■□□□ 1.16
CTSB-223ENST00000532370 CCDC191Q8NCU4 936 aa22.3■■□□□ 1.16
CTSB-223ENST00000532370 CRAMP1Q96RY5 1269 aa22.3■■□□□ 1.16
CTSB-223ENST00000532370 SLX4Q8IY92 1834 aa22.29■■□□□ 1.16
CTSB-223ENST00000532370 IRS4O14654 1257 aaPredicted RBP22.29■■□□□ 1.16
CTSB-223ENST00000532370 LMNB1P20700 586 aa22.29■■□□□ 1.16
CTSB-223ENST00000532370 TRMT2AQ8IZ69 625 aaKnown RBP22.29■■□□□ 1.16
CTSB-223ENST00000532370 ZBTB38Q8NAP3 1195 aaPredicted RBP22.29■■□□□ 1.16
CTSB-223ENST00000532370 CWC25Q9NXE8 425 aaPredicted RBP22.29■■□□□ 1.16
CTSB-223ENST00000532370 CWF19L2Q2TBE0 894 aaKnown RBP22.28■■□□□ 1.16
CTSB-223ENST00000532370 SOGA3Q5TF21 947 aa22.28■■□□□ 1.16
CTSB-223ENST00000532370 CCDC93Q567U6 631 aa22.27■■□□□ 1.16
CTSB-223ENST00000532370 TAOK3Q9H2K8 898 aa22.27■■□□□ 1.16
CTSB-223ENST00000532370 ABCC4O15439 1325 aa22.27■■□□□ 1.16
CTSB-223ENST00000532370 NEURL1BA8MQ27 555 aa22.26■■□□□ 1.15
CTSB-223ENST00000532370 F6X3S4 739 aa22.26■■□□□ 1.15
CTSB-223ENST00000532370 DNAAF4Q8WXU2 420 aa22.26■■□□□ 1.15
CTSB-223ENST00000532370 PPEF1O14829 653 aaPredicted RBP22.25■■□□□ 1.15
CTSB-223ENST00000532370 PCCAP05165 728 aaPredicted RBP22.25■■□□□ 1.15
CTSB-223ENST00000532370 NEXNQ0ZGT2 675 aa22.25■■□□□ 1.15
CTSB-223ENST00000532370 GPBP1L1Q9HC44 474 aaPredicted RBP22.25■■□□□ 1.15
CTSB-223ENST00000532370 ANKRD36CQ5JPF3 1778 aa22.25■■□□□ 1.15
CTSB-223ENST00000532370 ARFGEF2Q9Y6D5 1785 aa22.25■■□□□ 1.15
CTSB-223ENST00000532370 SF3B3Q15393 1217 aaKnown RBP22.24■■□□□ 1.15
CTSB-223ENST00000532370 DDX46Q7L014 1031 aaKnown RBP22.24■■□□□ 1.15
CTSB-223ENST00000532370 LTBP3Q9NS15 1303 aa22.24■■□□□ 1.15
CTSB-223ENST00000532370 HNRNPUQ00839 825 aaKnown RBP eCLIP22.23■■□□□ 1.15
CTSB-223ENST00000532370 RTKN2Q8IZC4 609 aa22.23■■□□□ 1.15
CTSB-223ENST00000532370 MRPL50Q8N5N7 158 aaKnown RBP22.23■■□□□ 1.15
CTSB-223ENST00000532370 SSH1Q8WYL5 1049 aa22.23■■□□□ 1.15
CTSB-223ENST00000532370 ZNF277Q9NRM2 450 aaPredicted RBP22.23■■□□□ 1.15
CTSB-223ENST00000532370 FKBP4Q02790 459 aaKnown RBP eCLIP22.22■■□□□ 1.15
CTSB-223ENST00000532370 BCL2L13Q9BXK5 485 aa22.22■■□□□ 1.15
CTSB-223ENST00000532370 BBOX1O75936 387 aa22.21■■□□□ 1.15
CTSB-223ENST00000532370 GRAPQ13588 217 aa22.21■■□□□ 1.15
CTSB-223ENST00000532370 GCKRQ14397 625 aa22.21■■□□□ 1.15
CTSB-223ENST00000532370 GRAPLQ8TC17 118 aaPredicted RBP22.21■■□□□ 1.15
CTSB-223ENST00000532370 ATP6V0A2Q9Y487 856 aa22.21■■□□□ 1.15
CTSB-223ENST00000532370 LINS1Q8NG48 757 aa22.2■■□□□ 1.14
CTSB-223ENST00000532370 CELF1Q92879 486 aaKnown RBP22.2■■□□□ 1.14
CTSB-223ENST00000532370 CCDC85AQ96PX6 553 aaPredicted RBP22.2■■□□□ 1.14
CTSB-223ENST00000532370 SNED1Q8TER0 1413 aa22.2■■□□□ 1.14
CTSB-223ENST00000532370 H7C1W4 665 aa22.19■■□□□ 1.14
CTSB-223ENST00000532370 PDE8AO60658 829 aa22.19■■□□□ 1.14
CTSB-223ENST00000532370 BEND3Q5T5X7 828 aa22.19■■□□□ 1.14
CTSB-223ENST00000532370 CC2D2BQ6DHV5 1058 aa22.19■■□□□ 1.14
CTSB-223ENST00000532370 UBE3BQ7Z3V4 1068 aa22.19■■□□□ 1.14
CTSB-223ENST00000532370 SEC31BQ9NQW1 1179 aa22.19■■□□□ 1.14
CTSB-223ENST00000532370 CDHR2Q9BYE9 1310 aa22.18■■□□□ 1.14
CTSB-223ENST00000532370 PSMD1Q99460 953 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms