RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 TCIRG1Q13488 830 aa29.64■■■□□ 2.34
PPP1CA-207ENST00000532279 SOGA3Q5TF21 947 aa29.64■■■□□ 2.34
PPP1CA-207ENST00000532279 TAOK3Q9H2K8 898 aa29.64■■■□□ 2.34
PPP1CA-207ENST00000532279 SALL2Q9Y467 1007 aaPredicted RBP29.64■■■□□ 2.34
PPP1CA-207ENST00000532279 ALDH1B1P30837 517 aa29.63■■■□□ 2.33
PPP1CA-207ENST00000532279 CRY2Q49AN0 593 aa29.63■■■□□ 2.33
PPP1CA-207ENST00000532279 ANKRD13DQ6ZTN6 518 aa29.63■■■□□ 2.33
PPP1CA-207ENST00000532279 FAM9BQ8IZU0 186 aa29.63■■■□□ 2.33
PPP1CA-207ENST00000532279 RPGRQ92834 1020 aaKnown RBP29.63■■■□□ 2.33
PPP1CA-207ENST00000532279 NLRP10Q86W26 655 aa29.62■■■□□ 2.33
PPP1CA-207ENST00000532279 PLBD2Q8NHP8 589 aa29.62■■■□□ 2.33
PPP1CA-207ENST00000532279 C7orf43Q8WVR3 580 aa29.62■■■□□ 2.33
PPP1CA-207ENST00000532279 ZNF428Q96B54 188 aa29.62■■■□□ 2.33
PPP1CA-207ENST00000532279 CCDC93Q567U6 631 aa29.61■■■□□ 2.33
PPP1CA-207ENST00000532279 OLFM4Q6UX06 510 aa29.61■■■□□ 2.33
PPP1CA-207ENST00000532279 KDM2BQ8NHM5 1336 aa29.61■■■□□ 2.33
PPP1CA-207ENST00000532279 ZC3H4Q9UPT8 1303 aaKnown RBP29.61■■■□□ 2.33
PPP1CA-207ENST00000532279 LAMB2P55268 1798 aa29.6■■■□□ 2.33
PPP1CA-207ENST00000532279 C3orf67Q6ZVT6 689 aa29.6■■■□□ 2.33
PPP1CA-207ENST00000532279 TSPYL6Q8N831 410 aa29.6■■■□□ 2.33
PPP1CA-207ENST00000532279 LTBP3Q9NS15 1303 aa29.6■■■□□ 2.33
PPP1CA-207ENST00000532279 NLRP3Q96P20 1036 aa29.58■■■□□ 2.33
PPP1CA-207ENST00000532279 PHAXQ9H814 394 aaKnown RBP29.58■■■□□ 2.33
PPP1CA-207ENST00000532279 TRMT112Q9UI30 125 aaKnown RBP29.58■■■□□ 2.33
PPP1CA-207ENST00000532279 RBM17Q96I25 401 aaKnown RBP29.57■■■□□ 2.32
PPP1CA-207ENST00000532279 RNF123Q5XPI4 1314 aa29.56■■■□□ 2.32
PPP1CA-207ENST00000532279 ATP5J2-PTCD1G3V325 749 aa29.56■■■□□ 2.32
PPP1CA-207ENST00000532279 HOXA10P31260 410 aaPredicted RBP29.56■■■□□ 2.32
PPP1CA-207ENST00000532279 NCBP3Q53F19 620 aaKnown RBP29.56■■■□□ 2.32
PPP1CA-207ENST00000532279 SLC10A5Q5PT55 438 aa29.56■■■□□ 2.32
PPP1CA-207ENST00000532279 CCDC30Q5VVM6 783 aa29.56■■■□□ 2.32
PPP1CA-207ENST00000532279 SYNE4Q8N205 404 aa29.56■■■□□ 2.32
PPP1CA-207ENST00000532279 IL16Q14005 1332 aa29.55■■■□□ 2.32
PPP1CA-207ENST00000532279 HCLS1P14317 486 aaPredicted RBP29.55■■■□□ 2.32
PPP1CA-207ENST00000532279 GOLGA2Q08379 1002 aa29.55■■■□□ 2.32
PPP1CA-207ENST00000532279 RIC3Q7Z5B4 369 aa29.55■■■□□ 2.32
PPP1CA-207ENST00000532279 RRAGCQ9HB90 399 aa29.55■■■□□ 2.32
PPP1CA-207ENST00000532279 SH3TC1Q8TE82 1336 aa29.54■■■□□ 2.32
PPP1CA-207ENST00000532279 GLTPD2A6NH11 291 aa29.53■■■□□ 2.32
PPP1CA-207ENST00000532279 FKBP4Q02790 459 aaKnown RBP eCLIP29.53■■■□□ 2.32
PPP1CA-207ENST00000532279 RTKN2Q8IZC4 609 aa29.53■■■□□ 2.32
PPP1CA-207ENST00000532279 ISCA1Q9BUE6 129 aa29.53■■■□□ 2.32
PPP1CA-207ENST00000532279 DDX60Q8IY21 1712 aaKnown RBP29.52■■■□□ 2.32
PPP1CA-207ENST00000532279 TCERG1O14776 1098 aaKnown RBP29.52■■■□□ 2.32
PPP1CA-207ENST00000532279 C16orf71Q8IYS4 520 aaPredicted RBP29.52■■■□□ 2.32
PPP1CA-207ENST00000532279 CRAMP1Q96RY5 1269 aa29.52■■■□□ 2.32
PPP1CA-207ENST00000532279 CHMP4AQ9BY43 222 aa29.52■■■□□ 2.32
PPP1CA-207ENST00000532279 TOMM70O94826 608 aa29.51■■■□□ 2.31
PPP1CA-207ENST00000532279 TWISTNBQ3B726 338 aaPredicted RBP29.51■■■□□ 2.31
PPP1CA-207ENST00000532279 ZNF277Q9NRM2 450 aaPredicted RBP29.51■■■□□ 2.31
PPP1CA-207ENST00000532279 FANCIQ9NVI1 1328 aa29.5■■■□□ 2.31
PPP1CA-207ENST00000532279 PPEF1O14829 653 aaPredicted RBP29.5■■■□□ 2.31
PPP1CA-207ENST00000532279 WDR63Q8IWG1 891 aa29.5■■■□□ 2.31
PPP1CA-207ENST00000532279 DPY19L2Q6NUT2 758 aa29.49■■■□□ 2.31
PPP1CA-207ENST00000532279 SLC51AQ86UW1 340 aa29.49■■■□□ 2.31
PPP1CA-207ENST00000532279 TAF1P21675 1872 aa29.48■■■□□ 2.31
PPP1CA-207ENST00000532279 RTL5Q5HYW3 569 aaPredicted RBP29.48■■■□□ 2.31
PPP1CA-207ENST00000532279 FAM89AQ96GI7 184 aa29.48■■■□□ 2.31
PPP1CA-207ENST00000532279 MYD88Q99836 296 aa29.48■■■□□ 2.31
PPP1CA-207ENST00000532279 STK31Q9BXU1 1019 aa29.48■■■□□ 2.31
PPP1CA-207ENST00000532279 ABCC4O15439 1325 aa29.47■■■□□ 2.31
PPP1CA-207ENST00000532279 SNED1Q8TER0 1413 aa29.46■■■□□ 2.31
PPP1CA-207ENST00000532279 DDX58O95786 925 aaKnown RBP29.46■■■□□ 2.31
PPP1CA-207ENST00000532279 CC2D2BQ6DHV5 1058 aa29.46■■■□□ 2.31
PPP1CA-207ENST00000532279 WDR90Q96KV7 1748 aa29.45■■■□□ 2.3
PPP1CA-207ENST00000532279 IARSP41252 1262 aaKnown RBP29.44■■■□□ 2.3
PPP1CA-207ENST00000532279 TRIM28Q13263 835 aaKnown RBP29.44■■■□□ 2.3
PPP1CA-207ENST00000532279 VEGFAP15692 232 aaPredicted RBP29.43■■■□□ 2.3
PPP1CA-207ENST00000532279 HSPA6P17066 643 aa29.43■■■□□ 2.3
PPP1CA-207ENST00000532279 DDX46Q7L014 1031 aaKnown RBP29.43■■■□□ 2.3
PPP1CA-207ENST00000532279 PSMD1Q99460 953 aa29.43■■■□□ 2.3
PPP1CA-207ENST00000532279 RBM46Q8TBY0 533 aaKnown RBP29.42■■■□□ 2.3
PPP1CA-207ENST00000532279 TMX4Q9H1E5 349 aaPredicted RBP29.42■■■□□ 2.3
PPP1CA-207ENST00000532279 SPINK5Q9NQ38 1064 aaPredicted RBP29.42■■■□□ 2.3
PPP1CA-207ENST00000532279 MAP3K2Q9Y2U5 619 aa29.42■■■□□ 2.3
PPP1CA-207ENST00000532279 DDNO94850 711 aaPredicted RBP29.41■■■□□ 2.3
PPP1CA-207ENST00000532279 EXOSC9Q06265 439 aaKnown RBP29.41■■■□□ 2.3
PPP1CA-207ENST00000532279 METTL22Q9BUU2 404 aaPredicted RBP29.41■■■□□ 2.3
PPP1CA-207ENST00000532279 ATP6V0A2Q9Y487 856 aa29.41■■■□□ 2.3
PPP1CA-207ENST00000532279 CACNA1FO60840 1977 aa29.41■■■□□ 2.3
PPP1CA-207ENST00000532279 IRS4O14654 1257 aaPredicted RBP29.4■■■□□ 2.3
PPP1CA-207ENST00000532279 SLC4A2P04920 1241 aa29.4■■■□□ 2.3
PPP1CA-207ENST00000532279 GRIPAP1Q4V328 841 aa29.4■■■□□ 2.3
PPP1CA-207ENST00000532279 G2E3Q7L622 706 aa29.4■■■□□ 2.3
PPP1CA-207ENST00000532279 PI4KAP2A4QPH2 592 aa29.39■■■□□ 2.3
PPP1CA-207ENST00000532279 BBOX1O75936 387 aa29.39■■■□□ 2.3
PPP1CA-207ENST00000532279 KSR2Q6VAB6 950 aa29.39■■■□□ 2.3
PPP1CA-207ENST00000532279 PI4KAP1Q8N8J0 262 aa29.39■■■□□ 2.3
PPP1CA-207ENST00000532279 ZBTB38Q8NAP3 1195 aaPredicted RBP29.39■■■□□ 2.3
PPP1CA-207ENST00000532279 POTECB2RU33 542 aa29.38■■■□□ 2.29
PPP1CA-207ENST00000532279 GRAPQ13588 217 aa29.38■■■□□ 2.29
PPP1CA-207ENST00000532279 CCDC191Q8NCU4 936 aa29.38■■■□□ 2.29
PPP1CA-207ENST00000532279 GRAPLQ8TC17 118 aaPredicted RBP29.38■■■□□ 2.29
PPP1CA-207ENST00000532279 CWC25Q9NXE8 425 aaPredicted RBP29.38■■■□□ 2.29
PPP1CA-207ENST00000532279 ZNF541Q9H0D2 1346 aa29.38■■■□□ 2.29
PPP1CA-207ENST00000532279 VAMP4O75379 141 aa29.37■■■□□ 2.29
PPP1CA-207ENST00000532279 JARID2Q92833 1246 aaPredicted RBP29.37■■■□□ 2.29
PPP1CA-207ENST00000532279 MYH16Q9H6N6 1097 aa29.37■■■□□ 2.29
PPP1CA-207ENST00000532279 SF3B3Q15393 1217 aaKnown RBP29.36■■■□□ 2.29
PPP1CA-207ENST00000532279 JDP2Q8WYK2 163 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms