RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.57
PPFIA1-219ENST00000531657 PIK3C2AO00443 1686 aa11.51□□□□□ -0.57
PPFIA1-219ENST00000531657 RAB11FIP3O75154 756 aa11.51□□□□□ -0.57
PPFIA1-219ENST00000531657 SNX14Q9Y5W7 946 aa11.51□□□□□ -0.57
PPFIA1-219ENST00000531657 C1orf167Q5SNV9 1468 aa11.51□□□□□ -0.57
PPFIA1-219ENST00000531657 GLRX3O76003 335 aaKnown RBP11.51□□□□□ -0.57
PPFIA1-219ENST00000531657 SNX21Q969T3 373 aa11.51□□□□□ -0.57
PPFIA1-219ENST00000531657 RBM8AQ9Y5S9 174 aaKnown RBP11.51□□□□□ -0.57
PPFIA1-219ENST00000531657 CCT2P78371 535 aaKnown RBP11.5□□□□□ -0.57
PPFIA1-219ENST00000531657 SMC3Q9UQE7 1217 aa11.5□□□□□ -0.57
PPFIA1-219ENST00000531657 JAG2Q9Y219 1238 aa11.5□□□□□ -0.57
PPFIA1-219ENST00000531657 CNPY2Q9Y2B0 182 aa11.5□□□□□ -0.57
PPFIA1-219ENST00000531657 ARHGAP23Q9P227 1491 aa11.5□□□□□ -0.57
PPFIA1-219ENST00000531657 KNDC1Q76NI1 1749 aa11.5□□□□□ -0.57
PPFIA1-219ENST00000531657 ZDHHC9Q9Y397 364 aa11.5□□□□□ -0.57
PPFIA1-219ENST00000531657 APPP05067 770 aa11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 DCAF5Q96JK2 942 aa11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 PDRG1Q9NUG6 133 aa11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 DBNLQ9UJU6 430 aaKnown RBP11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 PRIM1P49642 420 aaKnown RBP11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 CAMK4Q16566 473 aa11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 VPS53Q5VIR6 699 aa11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 RRAGDQ9NQL2 400 aaPredicted RBP11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 TOMM22Q9NS69 142 aa11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 EP400Q96L91 3159 aa11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 NPHP1O15259 732 aa11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 SGSM2O43147 1006 aa11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 HCLS1P14317 486 aaPredicted RBP11.49□□□□□ -0.57
PPFIA1-219ENST00000531657 REREQ9P2R6 1566 aa11.48□□□□□ -0.57
PPFIA1-219ENST00000531657 MEGF6O75095 1541 aa11.48□□□□□ -0.57
PPFIA1-219ENST00000531657 IL2RBP14784 551 aa11.48□□□□□ -0.57
PPFIA1-219ENST00000531657 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
PPFIA1-219ENST00000531657 TTLL5Q6EMB2 1281 aa11.48□□□□□ -0.57
PPFIA1-219ENST00000531657 METTL22Q9BUU2 404 aaPredicted RBP11.48□□□□□ -0.57
PPFIA1-219ENST00000531657 ANKRD26Q9UPS8 1709 aa11.48□□□□□ -0.57
PPFIA1-219ENST00000531657 ADORA1P30542 326 aa11.48□□□□□ -0.57
PPFIA1-219ENST00000531657 CEMIPQ8WUJ3 1361 aa11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 MON2Q7Z3U7 1717 aa11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 HSP90AB4PQ58FF6 505 aa11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 L1TD1Q5T7N2 865 aaKnown RBP11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 CCDC144CPQ8IYA2 1237 aa11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 ANKARQ7Z5J8 1434 aa11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 SLIT1O75093 1534 aa11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 RXRAP19793 462 aa11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 HLFQ16534 295 aa11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 RUFY3Q7L099 469 aa11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 CCDC82Q8N4S0 544 aa11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 ANP32BQ92688 251 aaKnown RBP11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 GPHNQ9NQX3 736 aaPredicted RBP11.47□□□□□ -0.57
PPFIA1-219ENST00000531657 PTMAP06454 111 aaKnown RBP11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 NASPP49321 788 aaPredicted RBP11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 NUCB2P80303 420 aa11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 POLA2Q14181 598 aa11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 GPT2Q8TD30 523 aa11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 SPATA31A3Q5VYP0 1347 aa11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 A0A087WWV3 80 aa11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 TAF5LO75529 589 aa11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 GJB2P29033 226 aa11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 CCDC57Q2TAC2 916 aa11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 NCOA5Q9HCD5 579 aaKnown RBP11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 CNNM1Q9NRU3 951 aa11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 CYP46A1Q9Y6A2 500 aa11.46□□□□□ -0.57
PPFIA1-219ENST00000531657 IDH1O75874 414 aaKnown RBP11.46□□□□□ -0.58
PPFIA1-219ENST00000531657 DNM1Q05193 864 aaKnown RBP11.46□□□□□ -0.58
PPFIA1-219ENST00000531657 PIGBQ92521 554 aa11.46□□□□□ -0.58
PPFIA1-219ENST00000531657 JAK2O60674 1132 aa11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 PTPN12Q05209 780 aaKnown RBP11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 TNNI3KQ59H18 835 aa11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 LSG1Q9H089 658 aaKnown RBP11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 CWC25Q9NXE8 425 aaPredicted RBP11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 FPGT-TNNI3KV9GXZ4 949 aa11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 ZSCAN23Q3MJ62 389 aa11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 CREB3L3Q68CJ9 461 aa11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 RUFY2Q8WXA3 655 aa11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 TMEM63CQ9P1W3 806 aa11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
PPFIA1-219ENST00000531657 OTUD7BQ6GQQ9 843 aa11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 ERCC4Q92889 916 aaPredicted RBP11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 ZNF830Q96NB3 372 aaPredicted RBP11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 ZBTB1Q9Y2K1 713 aa11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 KDM6AO15550 1401 aaPredicted RBP11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 WTIPA6NIX2 430 aaPredicted RBP11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 ALDH1L1O75891 902 aa11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 IFIT1P09914 478 aaKnown RBP11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 GTF2E1P29083 439 aaPredicted RBP11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 ME3Q16798 604 aa11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 USP48Q86UV5 1035 aa11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 BRF1Q92994 677 aa11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 BLOC1S2Q6QNY1 142 aa11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 INCENPQ9NQS7 918 aa11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 LMBRD1Q9NUN5 540 aa11.44□□□□□ -0.58
PPFIA1-219ENST00000531657 KDM4FA0A1W2PPD8 638 aa11.43□□□□□ -0.58
PPFIA1-219ENST00000531657 KCNQ2O43526 872 aa11.43□□□□□ -0.58
PPFIA1-219ENST00000531657 SYT1P21579 422 aa11.43□□□□□ -0.58
PPFIA1-219ENST00000531657 RRP12Q5JTH9 1297 aaKnown RBP11.43□□□□□ -0.58
PPFIA1-219ENST00000531657 METTL24Q5JXM2 366 aa11.43□□□□□ -0.58
PPFIA1-219ENST00000531657 LARP1BQ659C4 914 aaKnown RBP11.43□□□□□ -0.58
PPFIA1-219ENST00000531657 LDHAL6AQ6ZMR3 332 aa11.43□□□□□ -0.58
PPFIA1-219ENST00000531657 OSBPL3Q9H4L5 887 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms