RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 PHACTR1Q9C0D0 580 aa4.06□□□□□ -1.76
RC3H1-206ENST00000531594 TSPAN10Q9H1Z9 355 aaPredicted RBP4.06□□□□□ -1.76
RC3H1-206ENST00000531594 NEUROD4Q9HD90 331 aa4.06□□□□□ -1.76
RC3H1-206ENST00000531594 PCMTD2Q9NV79 361 aa4.06□□□□□ -1.76
RC3H1-206ENST00000531594 COBLO75128 1261 aa4.05□□□□□ -1.76
RC3H1-206ENST00000531594 DEAF1O75398 565 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-206ENST00000531594 ALX3O95076 343 aa4.05□□□□□ -1.76
RC3H1-206ENST00000531594 ABL2P42684 1182 aa4.05□□□□□ -1.76
RC3H1-206ENST00000531594 PSME1Q06323 249 aa4.05□□□□□ -1.76
RC3H1-206ENST00000531594 NCOA4Q13772 614 aa4.05□□□□□ -1.76
RC3H1-206ENST00000531594 FMNL2Q96PY5 1086 aa4.05□□□□□ -1.76
RC3H1-206ENST00000531594 OAS3Q9Y6K5 1087 aaKnown RBP4.05□□□□□ -1.76
RC3H1-206ENST00000531594 BACH1O14867 736 aa4.04□□□□□ -1.76
RC3H1-206ENST00000531594 SKIP12755 728 aa4.04□□□□□ -1.76
RC3H1-206ENST00000531594 CPB1P15086 417 aa4.04□□□□□ -1.76
RC3H1-206ENST00000531594 CD97P48960 835 aa4.04□□□□□ -1.76
RC3H1-206ENST00000531594 NEUROD1Q13562 356 aa4.04□□□□□ -1.76
RC3H1-206ENST00000531594 MSL1Q68DK7 614 aa4.04□□□□□ -1.76
RC3H1-206ENST00000531594 LPIN3Q9BQK8 851 aa4.04□□□□□ -1.76
RC3H1-206ENST00000531594 ZBTB42B2RXF5 422 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 APBB1O00213 710 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 PAX4O43316 350 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 C21orf2O43822 256 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 RGS9O75916 674 aaPredicted RBP4.03□□□□□ -1.76
RC3H1-206ENST00000531594 TAL1P17542 331 aaPredicted RBP4.03□□□□□ -1.76
RC3H1-206ENST00000531594 NFKB1P19838 968 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 FSTP19883 344 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 MLLT1Q03111 559 aaPredicted RBP4.03□□□□□ -1.76
RC3H1-206ENST00000531594 EML3Q32P44 896 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 PERM1Q5SV97 790 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 POTEAQ6S8J7 498 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 BTLAQ7Z6A9 289 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 FBXO11Q86XK2 927 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 GAS2L2Q8NHY3 880 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 GSX2Q9BZM3 304 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 NOD1Q9Y239 953 aa4.03□□□□□ -1.76
RC3H1-206ENST00000531594 GPC6Q9Y625 555 aaPredicted RBP4.03□□□□□ -1.76
RC3H1-206ENST00000531594 ZBTB7BO15156 539 aaPredicted RBP4.02□□□□□ -1.77
RC3H1-206ENST00000531594 TGFB1P01137 390 aa4.02□□□□□ -1.77
RC3H1-206ENST00000531594 BRPF1P55201 1214 aaPredicted RBP4.02□□□□□ -1.77
RC3H1-206ENST00000531594 PSMA6P60900 246 aaKnown RBP4.02□□□□□ -1.77
RC3H1-206ENST00000531594 CLDN10P78369 228 aa4.02□□□□□ -1.77
RC3H1-206ENST00000531594 SEMA3FQ13275 785 aa4.02□□□□□ -1.77
RC3H1-206ENST00000531594 FAM35AQ86V20 835 aa4.02□□□□□ -1.77
RC3H1-206ENST00000531594 TPCN2Q8NHX9 752 aa4.02□□□□□ -1.77
RC3H1-206ENST00000531594 ZFATQ9P243 1243 aa4.02□□□□□ -1.77
RC3H1-206ENST00000531594 IRAK1P51617 712 aa4.01□□□□□ -1.77
RC3H1-206ENST00000531594 HIRAP54198 1017 aaPredicted RBP4.01□□□□□ -1.77
RC3H1-206ENST00000531594 C1orf53Q5VUE5 145 aa4.01□□□□□ -1.77
RC3H1-206ENST00000531594 DZIP1LQ8IYY4 767 aaKnown RBP4.01□□□□□ -1.77
RC3H1-206ENST00000531594 AGGF1Q8N302 714 aaeCLIP4.01□□□□□ -1.77
RC3H1-206ENST00000531594 TSEN2Q8NCE0 465 aaKnown RBP4.01□□□□□ -1.77
RC3H1-206ENST00000531594 BCS1LQ9Y276 419 aa4.01□□□□□ -1.77
RC3H1-206ENST00000531594 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.01□□□□□ -1.77
RC3H1-206ENST00000531594 USP17L5A8MUK1 530 aa4□□□□□ -1.77
RC3H1-206ENST00000531594 DLL1O00548 723 aa4□□□□□ -1.77
RC3H1-206ENST00000531594 LGR5O75473 907 aa4□□□□□ -1.77
RC3H1-206ENST00000531594 YBX3P16989 372 aaKnown RBP eCLIP4□□□□□ -1.77
RC3H1-206ENST00000531594 TXKP42681 527 aa4□□□□□ -1.77
RC3H1-206ENST00000531594 GP2P55259 537 aaKnown RBP4□□□□□ -1.77
RC3H1-206ENST00000531594 HFE2Q6ZVN8 426 aa4□□□□□ -1.77
RC3H1-206ENST00000531594 KRT25Q7Z3Z0 450 aa4□□□□□ -1.77
RC3H1-206ENST00000531594 ALDH16A1Q8IZ83 802 aa4□□□□□ -1.77
RC3H1-206ENST00000531594 NGLY1Q96IV0 654 aa4□□□□□ -1.77
RC3H1-206ENST00000531594 CCDC102BQ68D86 513 aa3.99□□□□□ -1.77
RC3H1-206ENST00000531594 IGF2-ASQ6U949 168 aa3.99□□□□□ -1.77
RC3H1-206ENST00000531594 WFDC8Q8IUA0 241 aa3.99□□□□□ -1.77
RC3H1-206ENST00000531594 ANKIB1Q9P2G1 1089 aa3.99□□□□□ -1.77
RC3H1-206ENST00000531594 DMGDHQ9UI17 866 aaKnown RBP3.99□□□□□ -1.77
RC3H1-206ENST00000531594 RNF114Q9Y508 228 aa3.99□□□□□ -1.77
RC3H1-206ENST00000531594 KIAA1324LA8MWY0 1029 aaPredicted RBP3.98□□□□□ -1.77
RC3H1-206ENST00000531594 F8W735 103 aaPredicted RBP3.98□□□□□ -1.77
RC3H1-206ENST00000531594 PPP1R12BO60237 982 aaPredicted RBP3.98□□□□□ -1.77
RC3H1-206ENST00000531594 DKK1O94907 266 aa3.98□□□□□ -1.77
RC3H1-206ENST00000531594 TARSP26639 723 aaKnown RBP3.98□□□□□ -1.77
RC3H1-206ENST00000531594 FZD5Q13467 585 aa3.98□□□□□ -1.77
RC3H1-206ENST00000531594 CCINQ13939 588 aa3.98□□□□□ -1.77
RC3H1-206ENST00000531594 DTWD1Q8N5C7 304 aa3.98□□□□□ -1.77
RC3H1-206ENST00000531594 PNMA5Q96PV4 448 aa3.98□□□□□ -1.77
RC3H1-206ENST00000531594 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
RC3H1-206ENST00000531594 ALG2Q9H553 416 aa3.98□□□□□ -1.77
RC3H1-206ENST00000531594 AKTIPQ9H8T0 292 aa3.98□□□□□ -1.77
RC3H1-206ENST00000531594 WASHC4Q2M389 1173 aa3.97□□□□□ -1.77
RC3H1-206ENST00000531594 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
RC3H1-206ENST00000531594 ELMSAN1Q6PJG2 1045 aa3.97□□□□□ -1.77
RC3H1-206ENST00000531594 DHX32Q7L7V1 743 aaKnown RBP3.97□□□□□ -1.77
RC3H1-206ENST00000531594 ADAMTS19Q8TE59 1207 aa3.97□□□□□ -1.77
RC3H1-206ENST00000531594 IFT43Q96FT9 208 aa3.97□□□□□ -1.77
RC3H1-206ENST00000531594 UBL7Q96S82 380 aaPredicted RBP3.97□□□□□ -1.77
RC3H1-206ENST00000531594 SMG9Q9H0W8 520 aaKnown RBP3.97□□□□□ -1.77
RC3H1-206ENST00000531594 USP20Q9Y2K6 914 aa3.97□□□□□ -1.77
RC3H1-206ENST00000531594 SASH3O75995 380 aa3.96□□□□□ -1.78
RC3H1-206ENST00000531594 SPINK2P20155 84 aa3.96□□□□□ -1.78
RC3H1-206ENST00000531594 SOX11P35716 441 aa3.96□□□□□ -1.78
RC3H1-206ENST00000531594 Q6ZS46 218 aa3.96□□□□□ -1.78
RC3H1-206ENST00000531594 ZDHHC13Q8IUH4 622 aa3.96□□□□□ -1.78
RC3H1-206ENST00000531594 TRPM4Q8TD43 1214 aa3.96□□□□□ -1.78
RC3H1-206ENST00000531594 CHMP7Q8WUX9 453 aaPredicted RBP3.96□□□□□ -1.78
RC3H1-206ENST00000531594 ZNF594Q96JF6 807 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms