RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 ANXA1P04083 346 aa17.09■□□□□ 0.33
SF3B2-212ENST00000531589 AIMP1Q12904 312 aaKnown RBP17.09■□□□□ 0.33
SF3B2-212ENST00000531589 PROSER3Q2NL68 480 aa17.09■□□□□ 0.33
SF3B2-212ENST00000531589 HDGFL1Q5TGJ6 251 aa17.09■□□□□ 0.33
SF3B2-212ENST00000531589 XAGE3Q8WTP9 111 aa17.09■□□□□ 0.33
SF3B2-212ENST00000531589 TMX4Q9H1E5 349 aaPredicted RBP17.09■□□□□ 0.33
SF3B2-212ENST00000531589 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
SF3B2-212ENST00000531589 ABCC12Q96J65 1359 aa17.09■□□□□ 0.33
SF3B2-212ENST00000531589 CCDC88AQ3V6T2 1871 aa17.08■□□□□ 0.33
SF3B2-212ENST00000531589 APAF1O14727 1248 aa17.08■□□□□ 0.32
SF3B2-212ENST00000531589 CRAMP1Q96RY5 1269 aa17.08■□□□□ 0.32
SF3B2-212ENST00000531589 KRT24Q2M2I5 525 aa17.07■□□□□ 0.32
SF3B2-212ENST00000531589 SLC10A5Q5PT55 438 aa17.07■□□□□ 0.32
SF3B2-212ENST00000531589 CHMP4AQ9BY43 222 aa17.07■□□□□ 0.32
SF3B2-212ENST00000531589 CACNA1SQ13698 1873 aa17.06■□□□□ 0.32
SF3B2-212ENST00000531589 IQCA1LA6NCM1 817 aa17.06■□□□□ 0.32
SF3B2-212ENST00000531589 GNAI1P63096 354 aa17.06■□□□□ 0.32
SF3B2-212ENST00000531589 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
SF3B2-212ENST00000531589 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
SF3B2-212ENST00000531589 PSMD1Q99460 953 aa17.06■□□□□ 0.32
SF3B2-212ENST00000531589 IFT57Q9NWB7 429 aa17.06■□□□□ 0.32
SF3B2-212ENST00000531589 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
SF3B2-212ENST00000531589 CHPF2Q9P2E5 772 aa17.06■□□□□ 0.32
SF3B2-212ENST00000531589 DICER1Q9UPY3 1922 aaKnown RBP17.06■□□□□ 0.32
SF3B2-212ENST00000531589 CEP350Q5VT06 3117 aa17.05■□□□□ 0.32
SF3B2-212ENST00000531589 WDR90Q96KV7 1748 aa17.05■□□□□ 0.32
SF3B2-212ENST00000531589 POTECB2RU33 542 aa17.05■□□□□ 0.32
SF3B2-212ENST00000531589 DDNO94850 711 aaPredicted RBP17.05■□□□□ 0.32
SF3B2-212ENST00000531589 IARSP41252 1262 aaKnown RBP17.05■□□□□ 0.32
SF3B2-212ENST00000531589 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
SF3B2-212ENST00000531589 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
SF3B2-212ENST00000531589 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
SF3B2-212ENST00000531589 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
SF3B2-212ENST00000531589 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
SF3B2-212ENST00000531589 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
SF3B2-212ENST00000531589 OLFM4Q6UX06 510 aa17.04■□□□□ 0.32
SF3B2-212ENST00000531589 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
SF3B2-212ENST00000531589 NLRP10Q86W26 655 aa17.04■□□□□ 0.32
SF3B2-212ENST00000531589 DNAJC5GQ8N7S2 189 aa17.04■□□□□ 0.32
SF3B2-212ENST00000531589 PLBD2Q8NHP8 589 aa17.04■□□□□ 0.32
SF3B2-212ENST00000531589 TRMT112Q9UI30 125 aaKnown RBP17.04■□□□□ 0.32
SF3B2-212ENST00000531589 SH3TC1Q8TE82 1336 aa17.03■□□□□ 0.32
SF3B2-212ENST00000531589 L3MBTL3Q96JM7 780 aaPredicted RBP17.02■□□□□ 0.32
SF3B2-212ENST00000531589 FZD9O00144 591 aa17.01■□□□□ 0.31
SF3B2-212ENST00000531589 BBOX1O75936 387 aa17.01■□□□□ 0.31
SF3B2-212ENST00000531589 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
SF3B2-212ENST00000531589 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
SF3B2-212ENST00000531589 EIF6P56537 245 aaKnown RBP17■□□□□ 0.31
SF3B2-212ENST00000531589 C3orf67Q6ZVT6 689 aa17■□□□□ 0.31
SF3B2-212ENST00000531589 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
SF3B2-212ENST00000531589 KLRG1Q96E93 195 aa17■□□□□ 0.31
SF3B2-212ENST00000531589 VPS33BQ9H267 617 aa17■□□□□ 0.31
SF3B2-212ENST00000531589 ATP6V0A2Q9Y487 856 aa17■□□□□ 0.31
SF3B2-212ENST00000531589 SNED1Q8TER0 1413 aa16.99■□□□□ 0.31
SF3B2-212ENST00000531589 HCLS1P14317 486 aaPredicted RBP16.99■□□□□ 0.31
SF3B2-212ENST00000531589 GPC2Q8N158 579 aa16.99■□□□□ 0.31
SF3B2-212ENST00000531589 LARGE2Q8N3Y3 721 aa16.99■□□□□ 0.31
SF3B2-212ENST00000531589 SUPT20HQ8NEM7 779 aa16.99■□□□□ 0.31
SF3B2-212ENST00000531589 HACL1Q9UJ83 578 aa16.99■□□□□ 0.31
SF3B2-212ENST00000531589 ZNF316A6NFI3 1004 aaPredicted RBP16.98■□□□□ 0.31
SF3B2-212ENST00000531589 ANP32CO43423 234 aa16.98■□□□□ 0.31
SF3B2-212ENST00000531589 GOLGA2Q08379 1002 aa16.98■□□□□ 0.31
SF3B2-212ENST00000531589 TMC4Q7Z404 712 aa16.98■□□□□ 0.31
SF3B2-212ENST00000531589 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
SF3B2-212ENST00000531589 PNMA8AQ86V59 439 aaPredicted RBP16.98■□□□□ 0.31
SF3B2-212ENST00000531589 LDHDQ86WU2 507 aa16.98■□□□□ 0.31
SF3B2-212ENST00000531589 ISCA1Q9BUE6 129 aa16.98■□□□□ 0.31
SF3B2-212ENST00000531589 TAF1DQ9H5J8 278 aaPredicted RBP16.98■□□□□ 0.31
SF3B2-212ENST00000531589 ABCC4O15439 1325 aa16.97■□□□□ 0.31
SF3B2-212ENST00000531589 ZNF541Q9H0D2 1346 aa16.97■□□□□ 0.31
SF3B2-212ENST00000531589 ANKRD36CQ5JPF3 1778 aa16.97■□□□□ 0.31
SF3B2-212ENST00000531589 ELL2O00472 640 aaPredicted RBP16.97■□□□□ 0.31
SF3B2-212ENST00000531589 HSP90B1P14625 803 aaKnown RBP16.97■□□□□ 0.31
SF3B2-212ENST00000531589 HTRA3P83110 453 aa16.97■□□□□ 0.31
SF3B2-212ENST00000531589 TRIM28Q13263 835 aaKnown RBP16.97■□□□□ 0.31
SF3B2-212ENST00000531589 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
SF3B2-212ENST00000531589 SP8Q8IXZ3 490 aa16.97■□□□□ 0.31
SF3B2-212ENST00000531589 DDX58O95786 925 aaKnown RBP16.96■□□□□ 0.31
SF3B2-212ENST00000531589 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
SF3B2-212ENST00000531589 CCDC30Q5VVM6 783 aa16.96■□□□□ 0.31
SF3B2-212ENST00000531589 NIM1KQ8IY84 436 aa16.96■□□□□ 0.31
SF3B2-212ENST00000531589 SCN4AP35499 1836 aa16.96■□□□□ 0.3
SF3B2-212ENST00000531589 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
SF3B2-212ENST00000531589 PPIP5K2O43314 1243 aa16.95■□□□□ 0.3
SF3B2-212ENST00000531589 EPHX2P34913 555 aa16.95■□□□□ 0.3
SF3B2-212ENST00000531589 GRAPQ13588 217 aa16.95■□□□□ 0.3
SF3B2-212ENST00000531589 EAPPQ56P03 285 aaPredicted RBP16.95■□□□□ 0.3
SF3B2-212ENST00000531589 DPP8Q6V1X1 898 aaPredicted RBP16.95■□□□□ 0.3
SF3B2-212ENST00000531589 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
SF3B2-212ENST00000531589 GRAPLQ8TC17 118 aaPredicted RBP16.95■□□□□ 0.3
SF3B2-212ENST00000531589 MRS2Q9HD23 443 aa16.95■□□□□ 0.3
SF3B2-212ENST00000531589 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
SF3B2-212ENST00000531589 SF3B3Q15393 1217 aaKnown RBP16.94■□□□□ 0.3
SF3B2-212ENST00000531589 CCDC184Q52MB2 194 aa16.94■□□□□ 0.3
SF3B2-212ENST00000531589 MPNDQ8N594 471 aa16.94■□□□□ 0.3
SF3B2-212ENST00000531589 C8orf58Q8NAV2 365 aa16.94■□□□□ 0.3
SF3B2-212ENST00000531589 FAM89AQ96GI7 184 aa16.94■□□□□ 0.3
SF3B2-212ENST00000531589 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
SF3B2-212ENST00000531589 CLEC11AQ9Y240 323 aa16.94■□□□□ 0.3
SF3B2-212ENST00000531589 GJA3Q9Y6H8 435 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms