RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 BICRAQ9NZM4 1560 aa10.21□□□□□ -0.78
CASP4-210ENST00000531546 A0A0A0MRY4 1105 aa10.2□□□□□ -0.78
CASP4-210ENST00000531546 USP17L3A6NCW0 530 aa10.2□□□□□ -0.78
CASP4-210ENST00000531546 USP17L4A6NCW7 530 aa10.2□□□□□ -0.78
CASP4-210ENST00000531546 TBC1D8BQ0IIM8 1120 aa10.2□□□□□ -0.78
CASP4-210ENST00000531546 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
CASP4-210ENST00000531546 USP17L1Q7RTZ2 530 aa10.2□□□□□ -0.78
CASP4-210ENST00000531546 JPH1Q9HDC5 661 aaPredicted RBP10.2□□□□□ -0.78
CASP4-210ENST00000531546 LARGE2Q8N3Y3 721 aa10.19□□□□□ -0.78
CASP4-210ENST00000531546 SLC6A14Q9UN76 642 aa10.19□□□□□ -0.78
CASP4-210ENST00000531546 RBM19Q9Y4C8 960 aaKnown RBP10.19□□□□□ -0.78
CASP4-210ENST00000531546 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
CASP4-210ENST00000531546 ZBTB7BO15156 539 aaPredicted RBP10.18□□□□□ -0.78
CASP4-210ENST00000531546 SELPP16109 830 aa10.18□□□□□ -0.78
CASP4-210ENST00000531546 CLDN10P78369 228 aa10.18□□□□□ -0.78
CASP4-210ENST00000531546 TPRNQ4KMQ1 711 aa10.18□□□□□ -0.78
CASP4-210ENST00000531546 ZNF280CQ8ND82 737 aa10.18□□□□□ -0.78
CASP4-210ENST00000531546 LENG1Q96BZ8 264 aaPredicted RBP10.18□□□□□ -0.78
CASP4-210ENST00000531546 RAD21O60216 631 aa10.17□□□□□ -0.78
CASP4-210ENST00000531546 PPP1R12BO60237 982 aaPredicted RBP10.17□□□□□ -0.78
CASP4-210ENST00000531546 BTLAQ7Z6A9 289 aa10.17□□□□□ -0.78
CASP4-210ENST00000531546 KRTAP9-6A0A140TA67 174 aa10.16□□□□□ -0.78
CASP4-210ENST00000531546 LRP8Q14114 963 aa10.16□□□□□ -0.78
CASP4-210ENST00000531546 SIX5Q8N196 739 aa10.16□□□□□ -0.78
CASP4-210ENST00000531546 OGFOD1Q8N543 542 aa10.16□□□□□ -0.78
CASP4-210ENST00000531546 PNMA5Q96PV4 448 aa10.16□□□□□ -0.78
CASP4-210ENST00000531546 IGFLR1Q9H665 355 aa10.16□□□□□ -0.78
CASP4-210ENST00000531546 ALDH16A1Q8IZ83 802 aa10.15□□□□□ -0.78
CASP4-210ENST00000531546 STAG2Q8N3U4 1231 aa10.15□□□□□ -0.78
CASP4-210ENST00000531546 ATP9BO43861 1147 aa10.14□□□□□ -0.79
CASP4-210ENST00000531546 FMR1NBQ8N0W7 255 aaPredicted RBP10.14□□□□□ -0.79
CASP4-210ENST00000531546 TSEN2Q8NCE0 465 aaKnown RBP10.14□□□□□ -0.79
CASP4-210ENST00000531546 GAS2L2Q8NHY3 880 aa10.14□□□□□ -0.79
CASP4-210ENST00000531546 NUDT8Q8WV74 236 aa10.14□□□□□ -0.79
CASP4-210ENST00000531546 USP21Q9UK80 565 aa10.14□□□□□ -0.79
CASP4-210ENST00000531546 IER5Q5VY09 327 aa10.13□□□□□ -0.79
CASP4-210ENST00000531546 PSAPL1Q6NUJ1 521 aa10.13□□□□□ -0.79
CASP4-210ENST00000531546 TP53INP1Q96A56 240 aa10.13□□□□□ -0.79
CASP4-210ENST00000531546 DNAJB12Q9NXW2 375 aaKnown RBP10.13□□□□□ -0.79
CASP4-210ENST00000531546 MKRN1Q9UHC7 482 aaKnown RBP10.13□□□□□ -0.79
CASP4-210ENST00000531546 AFF1P51825 1210 aaKnown RBP10.12□□□□□ -0.79
CASP4-210ENST00000531546 SHISA2Q6UWI4 295 aa10.12□□□□□ -0.79
CASP4-210ENST00000531546 POM121Q96HA1 1249 aa10.12□□□□□ -0.79
CASP4-210ENST00000531546 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.12□□□□□ -0.79
CASP4-210ENST00000531546 RGS9O75916 674 aaPredicted RBP10.11□□□□□ -0.79
CASP4-210ENST00000531546 PCSK7Q16549 785 aa10.11□□□□□ -0.79
CASP4-210ENST00000531546 ZNF594Q96JF6 807 aaPredicted RBP10.11□□□□□ -0.79
CASP4-210ENST00000531546 UCN2Q96RP3 112 aa10.11□□□□□ -0.79
CASP4-210ENST00000531546 C2orf49Q9BVC5 232 aaPredicted RBP10.11□□□□□ -0.79
CASP4-210ENST00000531546 C21orf2O43822 256 aa10.1□□□□□ -0.79
CASP4-210ENST00000531546 EPB42P16452 691 aa10.1□□□□□ -0.79
CASP4-210ENST00000531546 CCINQ13939 588 aa10.1□□□□□ -0.79
CASP4-210ENST00000531546 DTWD1Q8N5C7 304 aa10.1□□□□□ -0.79
CASP4-210ENST00000531546 ADAMTS19Q8TE59 1207 aa10.1□□□□□ -0.79
CASP4-210ENST00000531546 GSX2Q9BZM3 304 aa10.1□□□□□ -0.79
CASP4-210ENST00000531546 NAGPAQ9UK23 515 aa10.1□□□□□ -0.79
CASP4-210ENST00000531546 POM121CA8CG34 1229 aa10.09□□□□□ -0.79
CASP4-210ENST00000531546 NGLY1Q96IV0 654 aa10.09□□□□□ -0.79
CASP4-210ENST00000531546 ATAD2Q6PL18 1390 aa10.09□□□□□ -0.79
CASP4-210ENST00000531546 TGFBR3LH3BV60 316 aa10.08□□□□□ -0.8
CASP4-210ENST00000531546 NFKB1P19838 968 aa10.08□□□□□ -0.8
CASP4-210ENST00000531546 RTN1Q16799 776 aa10.08□□□□□ -0.8
CASP4-210ENST00000531546 DMRTC2Q8IXT2 367 aaPredicted RBP10.08□□□□□ -0.8
CASP4-210ENST00000531546 SCG3Q8WXD2 468 aaKnown RBP10.08□□□□□ -0.8
CASP4-210ENST00000531546 SSBP4Q9BWG4 385 aaPredicted RBP10.08□□□□□ -0.8
CASP4-210ENST00000531546 UBTFP17480 764 aaKnown RBP10.07□□□□□ -0.8
CASP4-210ENST00000531546 HDGFL1Q5TGJ6 251 aa10.07□□□□□ -0.8
CASP4-210ENST00000531546 MSL1Q68DK7 614 aa10.07□□□□□ -0.8
CASP4-210ENST00000531546 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
CASP4-210ENST00000531546 FRRS1LQ9P0K9 344 aa10.07□□□□□ -0.8
CASP4-210ENST00000531546 EIF4G1Q04637 1599 aaKnown RBP10.06□□□□□ -0.8
CASP4-210ENST00000531546 SEC13P55735 322 aa10.06□□□□□ -0.8
CASP4-210ENST00000531546 ILDR2Q71H61 639 aa10.06□□□□□ -0.8
CASP4-210ENST00000531546 FAM35AQ86V20 835 aa10.06□□□□□ -0.8
CASP4-210ENST00000531546 HYAL3O43820 417 aaPredicted RBP10.05□□□□□ -0.8
CASP4-210ENST00000531546 DKK1O94907 266 aa10.05□□□□□ -0.8
CASP4-210ENST00000531546 FLIIQ13045 1269 aa10.05□□□□□ -0.8
CASP4-210ENST00000531546 CUX2O14529 1486 aa10.04□□□□□ -0.8
CASP4-210ENST00000531546 RASA1P20936 1047 aa10.04□□□□□ -0.8
CASP4-210ENST00000531546 KRTAP1-3Q8IUG1 177 aa10.04□□□□□ -0.8
CASP4-210ENST00000531546 MAP3K6O95382 1288 aa10.03□□□□□ -0.8
CASP4-210ENST00000531546 FBXO11Q86XK2 927 aa10.03□□□□□ -0.8
CASP4-210ENST00000531546 CPB1P15086 417 aa10.02□□□□□ -0.81
CASP4-210ENST00000531546 WFDC8Q8IUA0 241 aa10.02□□□□□ -0.81
CASP4-210ENST00000531546 LPIN3Q9BQK8 851 aa10.02□□□□□ -0.81
CASP4-210ENST00000531546 ELMSAN1Q6PJG2 1045 aa10.01□□□□□ -0.81
CASP4-210ENST00000531546 WFDC12Q8WWY7 111 aa10.01□□□□□ -0.81
CASP4-210ENST00000531546 C11orf16Q9NQ32 467 aa10.01□□□□□ -0.81
CASP4-210ENST00000531546 DMGDHQ9UI17 866 aaKnown RBP10.01□□□□□ -0.81
CASP4-210ENST00000531546 RNF112Q9ULX5 631 aa10.01□□□□□ -0.81
CASP4-210ENST00000531546 ARID4AP29374 1257 aaPredicted RBP10□□□□□ -0.81
CASP4-210ENST00000531546 IGF2-ASQ6U949 168 aa10□□□□□ -0.81
CASP4-210ENST00000531546 DHX32Q7L7V1 743 aaKnown RBP10□□□□□ -0.81
CASP4-210ENST00000531546 TRPM4Q8TD43 1214 aa10□□□□□ -0.81
CASP4-210ENST00000531546 KRTAP4-12Q9BQ66 201 aa10□□□□□ -0.81
CASP4-210ENST00000531546 IGFBP4P22692 258 aa9.99□□□□□ -0.81
CASP4-210ENST00000531546 IREB2P48200 963 aaKnown RBP9.99□□□□□ -0.81
CASP4-210ENST00000531546 IDH3AP50213 366 aa9.99□□□□□ -0.81
CASP4-210ENST00000531546 GRIK5Q16478 980 aa9.99□□□□□ -0.81
CASP4-210ENST00000531546 PERM1Q5SV97 790 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms