RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ALDH16A1Q8IZ83 802 aa10.71□□□□□ -0.69
PTPRK-220ENST00000531466 SIX5Q8N196 739 aa10.71□□□□□ -0.69
PTPRK-220ENST00000531466 NGLY1Q96IV0 654 aa10.71□□□□□ -0.69
PTPRK-220ENST00000531466 RBM19Q9Y4C8 960 aaKnown RBP10.71□□□□□ -0.69
PTPRK-220ENST00000531466 BTLAQ7Z6A9 289 aa10.7□□□□□ -0.7
PTPRK-220ENST00000531466 SLC6A14Q9UN76 642 aa10.7□□□□□ -0.7
PTPRK-220ENST00000531466 DKK1O94907 266 aa10.69□□□□□ -0.7
PTPRK-220ENST00000531466 CHMP7Q8WUX9 453 aaPredicted RBP10.69□□□□□ -0.7
PTPRK-220ENST00000531466 NUDT8Q8WV74 236 aa10.69□□□□□ -0.7
PTPRK-220ENST00000531466 SCG3Q8WXD2 468 aaKnown RBP10.69□□□□□ -0.7
PTPRK-220ENST00000531466 PSMG3-AS1Q96PY0 264 aa10.69□□□□□ -0.7
PTPRK-220ENST00000531466 ATAD2Q6PL18 1390 aa10.68□□□□□ -0.7
PTPRK-220ENST00000531466 JPH1Q9HDC5 661 aaPredicted RBP10.68□□□□□ -0.7
PTPRK-220ENST00000531466 A0A0A0MRY4 1105 aa10.67□□□□□ -0.7
PTPRK-220ENST00000531466 C2orf49Q9BVC5 232 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-220ENST00000531466 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
PTPRK-220ENST00000531466 SELPP16109 830 aa10.66□□□□□ -0.7
PTPRK-220ENST00000531466 RASA1P20936 1047 aa10.66□□□□□ -0.7
PTPRK-220ENST00000531466 FLIIQ13045 1269 aa10.66□□□□□ -0.7
PTPRK-220ENST00000531466 MBTPS1Q14703 1052 aa10.66□□□□□ -0.7
PTPRK-220ENST00000531466 PRSS36Q5K4E3 855 aa10.66□□□□□ -0.7
PTPRK-220ENST00000531466 C9orf172C9J069 976 aa10.65□□□□□ -0.7
PTPRK-220ENST00000531466 ELNP15502 786 aa10.65□□□□□ -0.7
PTPRK-220ENST00000531466 DNAJB12Q9NXW2 375 aaKnown RBP10.65□□□□□ -0.7
PTPRK-220ENST00000531466 LGR5O75473 907 aa10.64□□□□□ -0.71
PTPRK-220ENST00000531466 RAC1P63000 192 aa10.64□□□□□ -0.71
PTPRK-220ENST00000531466 ADGRE1Q14246 886 aa10.64□□□□□ -0.71
PTPRK-220ENST00000531466 SHISA2Q6UWI4 295 aa10.64□□□□□ -0.71
PTPRK-220ENST00000531466 STAG2Q8N3U4 1231 aa10.64□□□□□ -0.71
PTPRK-220ENST00000531466 NAGPAQ9UK23 515 aa10.64□□□□□ -0.71
PTPRK-220ENST00000531466 NFKB1P19838 968 aa10.63□□□□□ -0.71
PTPRK-220ENST00000531466 SEC13P55735 322 aa10.63□□□□□ -0.71
PTPRK-220ENST00000531466 HIF1AQ16665 826 aa10.63□□□□□ -0.71
PTPRK-220ENST00000531466 PSAPL1Q6NUJ1 521 aa10.63□□□□□ -0.71
PTPRK-220ENST00000531466 GAS2L2Q8NHY3 880 aa10.63□□□□□ -0.71
PTPRK-220ENST00000531466 PNMA5Q96PV4 448 aa10.63□□□□□ -0.71
PTPRK-220ENST00000531466 GSX2Q9BZM3 304 aa10.63□□□□□ -0.71
PTPRK-220ENST00000531466 AFF1P51825 1210 aaKnown RBP10.62□□□□□ -0.71
PTPRK-220ENST00000531466 TFIP11Q9UBB9 837 aaKnown RBP10.62□□□□□ -0.71
PTPRK-220ENST00000531466 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.62□□□□□ -0.71
PTPRK-220ENST00000531466 TXNRD3Q86VQ6 643 aa10.61□□□□□ -0.71
PTPRK-220ENST00000531466 DMRTC2Q8IXT2 367 aaPredicted RBP10.61□□□□□ -0.71
PTPRK-220ENST00000531466 CCINQ13939 588 aa10.6□□□□□ -0.71
PTPRK-220ENST00000531466 RTN1Q16799 776 aa10.6□□□□□ -0.71
PTPRK-220ENST00000531466 ARTNQ5T4W7 220 aa10.6□□□□□ -0.71
PTPRK-220ENST00000531466 LENG1Q96BZ8 264 aaPredicted RBP10.6□□□□□ -0.71
PTPRK-220ENST00000531466 HINFPQ9BQA5 517 aa10.6□□□□□ -0.71
PTPRK-220ENST00000531466 ZFP64Q9NPA5 681 aa10.6□□□□□ -0.71
PTPRK-220ENST00000531466 BCS1LQ9Y276 419 aa10.6□□□□□ -0.71
PTPRK-220ENST00000531466 MAFBQ9Y5Q3 323 aaPredicted RBP10.6□□□□□ -0.71
PTPRK-220ENST00000531466 TGFBR3LH3BV60 316 aa10.59□□□□□ -0.71
PTPRK-220ENST00000531466 RGS9O75916 674 aaPredicted RBP10.59□□□□□ -0.71
PTPRK-220ENST00000531466 IER5Q5VY09 327 aa10.59□□□□□ -0.71
PTPRK-220ENST00000531466 GLMNQ92990 594 aa10.59□□□□□ -0.71
PTPRK-220ENST00000531466 EFCC1Q9HA90 598 aa10.59□□□□□ -0.71
PTPRK-220ENST00000531466 USP21Q9UK80 565 aa10.59□□□□□ -0.71
PTPRK-220ENST00000531466 H2AFB1P0C5Y9 115 aa10.58□□□□□ -0.72
PTPRK-220ENST00000531466 H2AFB2P0C5Z0 115 aa10.58□□□□□ -0.72
PTPRK-220ENST00000531466 NRG1Q02297 640 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-220ENST00000531466 FMR1NBQ8N0W7 255 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-220ENST00000531466 DMGDHQ9UI17 866 aaKnown RBP10.58□□□□□ -0.72
PTPRK-220ENST00000531466 LARP1Q6PKG0 1096 aaKnown RBP10.57□□□□□ -0.72
PTPRK-220ENST00000531466 FAM35AQ86V20 835 aa10.57□□□□□ -0.72
PTPRK-220ENST00000531466 TP53INP1Q96A56 240 aa10.57□□□□□ -0.72
PTPRK-220ENST00000531466 CPB1P15086 417 aa10.56□□□□□ -0.72
PTPRK-220ENST00000531466 GRNP28799 593 aaKnown RBP10.56□□□□□ -0.72
PTPRK-220ENST00000531466 CRTC2Q53ET0 693 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-220ENST00000531466 CLUAP1Q96AJ1 413 aa10.56□□□□□ -0.72
PTPRK-220ENST00000531466 KRTAP9-2Q9BYQ4 174 aa10.56□□□□□ -0.72
PTPRK-220ENST00000531466 KLK14Q9P0G3 267 aa10.56□□□□□ -0.72
PTPRK-220ENST00000531466 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.55□□□□□ -0.72
PTPRK-220ENST00000531466 DPYDQ12882 1025 aa10.55□□□□□ -0.72
PTPRK-220ENST00000531466 KRT25Q7Z3Z0 450 aa10.55□□□□□ -0.72
PTPRK-220ENST00000531466 IDH3AP50213 366 aa10.54□□□□□ -0.72
PTPRK-220ENST00000531466 EPB42P16452 691 aa10.53□□□□□ -0.72
PTPRK-220ENST00000531466 IGFBP4P22692 258 aa10.53□□□□□ -0.72
PTPRK-220ENST00000531466 INPP5BP32019 993 aa10.53□□□□□ -0.72
PTPRK-220ENST00000531466 MLLT1Q03111 559 aaPredicted RBP10.53□□□□□ -0.72
PTPRK-220ENST00000531466 PLAURQ03405 335 aa10.53□□□□□ -0.72
PTPRK-220ENST00000531466 PTK7Q13308 1070 aa10.53□□□□□ -0.72
PTPRK-220ENST00000531466 MSL1Q68DK7 614 aa10.53□□□□□ -0.72
PTPRK-220ENST00000531466 ILDR2Q71H61 639 aa10.53□□□□□ -0.72
PTPRK-220ENST00000531466 ZFATQ9P243 1243 aa10.53□□□□□ -0.72
PTPRK-220ENST00000531466 NBPF11Q86T75 865 aa10.52□□□□□ -0.73
PTPRK-220ENST00000531466 PROSER2Q86WR7 435 aaPredicted RBP10.52□□□□□ -0.73
PTPRK-220ENST00000531466 SSBP4Q9BWG4 385 aaPredicted RBP10.52□□□□□ -0.73
PTPRK-220ENST00000531466 KRTAP9-6A0A140TA67 174 aa10.51□□□□□ -0.73
PTPRK-220ENST00000531466 MAP3K6O95382 1288 aa10.51□□□□□ -0.73
PTPRK-220ENST00000531466 DGKZQ13574 1117 aa10.51□□□□□ -0.73
PTPRK-220ENST00000531466 GRIK5Q16478 980 aa10.51□□□□□ -0.73
PTPRK-220ENST00000531466 PERM1Q5SV97 790 aa10.51□□□□□ -0.73
PTPRK-220ENST00000531466 FNBP4Q8N3X1 1017 aaPredicted RBP10.51□□□□□ -0.73
PTPRK-220ENST00000531466 LPIN3Q9BQK8 851 aa10.51□□□□□ -0.73
PTPRK-220ENST00000531466 ZBTB42B2RXF5 422 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L15C9J2P7 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L10C9JJH3 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L13C9JLJ4 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L12C9JPN9 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L21D6R901 530 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 887 ms