RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 NLRP10Q86W26 655 aa14.17□□□□□ -0.14
CAPN1-221ENST00000531068 C16orf71Q8IYS4 520 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-221ENST00000531068 TRMT112Q9UI30 125 aaKnown RBP14.17□□□□□ -0.14
CAPN1-221ENST00000531068 KIAA1551Q9HCM1 1747 aa14.17□□□□□ -0.14
CAPN1-221ENST00000531068 IL16Q14005 1332 aa14.16□□□□□ -0.14
CAPN1-221ENST00000531068 SENP3-EIF4A1A0A087X0R7 540 aa14.16□□□□□ -0.14
CAPN1-221ENST00000531068 GLTPD2A6NH11 291 aa14.16□□□□□ -0.14
CAPN1-221ENST00000531068 TOMM70O94826 608 aa14.16□□□□□ -0.14
CAPN1-221ENST00000531068 GOLGA2Q08379 1002 aa14.16□□□□□ -0.14
CAPN1-221ENST00000531068 WDR63Q8IWG1 891 aa14.16□□□□□ -0.14
CAPN1-221ENST00000531068 C8orf58Q8NAV2 365 aa14.16□□□□□ -0.14
CAPN1-221ENST00000531068 CRAMP1Q96RY5 1269 aa14.16□□□□□ -0.14
CAPN1-221ENST00000531068 TMX4Q9H1E5 349 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-221ENST00000531068 NMRK2Q9NPI5 230 aa14.16□□□□□ -0.14
CAPN1-221ENST00000531068 KDM3BQ7LBC6 1761 aa14.16□□□□□ -0.14
CAPN1-221ENST00000531068 DDX58O95786 925 aaKnown RBP14.15□□□□□ -0.14
CAPN1-221ENST00000531068 TRIM28Q13263 835 aaKnown RBP14.15□□□□□ -0.14
CAPN1-221ENST00000531068 RIC3Q7Z5B4 369 aa14.15□□□□□ -0.14
CAPN1-221ENST00000531068 SH3TC1Q8TE82 1336 aa14.15□□□□□ -0.15
CAPN1-221ENST00000531068 DLG5Q8TDM6 1919 aa14.14□□□□□ -0.15
CAPN1-221ENST00000531068 ABCC12Q96J65 1359 aa14.14□□□□□ -0.15
CAPN1-221ENST00000531068 PRELPP51888 382 aa14.14□□□□□ -0.15
CAPN1-221ENST00000531068 FKBP4Q02790 459 aaKnown RBP eCLIP14.14□□□□□ -0.15
CAPN1-221ENST00000531068 FAM9BQ8IZU0 186 aa14.14□□□□□ -0.15
CAPN1-221ENST00000531068 STK31Q9BXU1 1019 aa14.14□□□□□ -0.15
CAPN1-221ENST00000531068 RRAGCQ9HB90 399 aa14.14□□□□□ -0.15
CAPN1-221ENST00000531068 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
CAPN1-221ENST00000531068 RIC1Q4ADV7 1423 aa14.14□□□□□ -0.15
CAPN1-221ENST00000531068 BBOX1O75936 387 aa14.13□□□□□ -0.15
CAPN1-221ENST00000531068 HSP90B1P14625 803 aaKnown RBP14.13□□□□□ -0.15
CAPN1-221ENST00000531068 VEGFAP15692 232 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-221ENST00000531068 TSR2Q969E8 191 aaKnown RBP14.13□□□□□ -0.15
CAPN1-221ENST00000531068 ISCA1Q9BUE6 129 aa14.13□□□□□ -0.15
CAPN1-221ENST00000531068 HCLS1P14317 486 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-221ENST00000531068 YTHDC1Q96MU7 727 aaKnown RBP14.12□□□□□ -0.15
CAPN1-221ENST00000531068 PSMD1Q99460 953 aa14.12□□□□□ -0.15
CAPN1-221ENST00000531068 PHAXQ9H814 394 aaKnown RBP14.12□□□□□ -0.15
CAPN1-221ENST00000531068 SALL2Q9Y467 1007 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-221ENST00000531068 AFDNP55196 1824 aaKnown RBP14.12□□□□□ -0.15
CAPN1-221ENST00000531068 ATP5J2-PTCD1G3V325 749 aa14.11□□□□□ -0.15
CAPN1-221ENST00000531068 TWISTNBQ3B726 338 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-221ENST00000531068 DDX46Q7L014 1031 aaKnown RBP14.11□□□□□ -0.15
CAPN1-221ENST00000531068 SYNE4Q8N205 404 aa14.11□□□□□ -0.15
CAPN1-221ENST00000531068 TSPYL6Q8N831 410 aa14.11□□□□□ -0.15
CAPN1-221ENST00000531068 RBM46Q8TBY0 533 aaKnown RBP14.11□□□□□ -0.15
CAPN1-221ENST00000531068 LAMB4A4D0S4 1761 aa14.11□□□□□ -0.15
CAPN1-221ENST00000531068 BCORQ6W2J9 1755 aa14.1□□□□□ -0.15
CAPN1-221ENST00000531068 PPEF1O14829 653 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-221ENST00000531068 HSPA6P17066 643 aa14.1□□□□□ -0.15
CAPN1-221ENST00000531068 FSTL1Q12841 308 aa14.1□□□□□ -0.15
CAPN1-221ENST00000531068 C3orf67Q6ZVT6 689 aa14.1□□□□□ -0.15
CAPN1-221ENST00000531068 FAM89AQ96GI7 184 aa14.1□□□□□ -0.15
CAPN1-221ENST00000531068 MYH16Q9H6N6 1097 aa14.1□□□□□ -0.15
CAPN1-221ENST00000531068 ZNF277Q9NRM2 450 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-221ENST00000531068 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
CAPN1-221ENST00000531068 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
CAPN1-221ENST00000531068 KSR2Q6VAB6 950 aa14.09□□□□□ -0.15
CAPN1-221ENST00000531068 TMC4Q7Z404 712 aa14.09□□□□□ -0.15
CAPN1-221ENST00000531068 CCDC191Q8NCU4 936 aa14.09□□□□□ -0.15
CAPN1-221ENST00000531068 JDP2Q8WYK2 163 aa14.09□□□□□ -0.15
CAPN1-221ENST00000531068 METTL22Q9BUU2 404 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-221ENST00000531068 VPS33BQ9H267 617 aa14.09□□□□□ -0.15
CAPN1-221ENST00000531068 ATP6V0A2Q9Y487 856 aa14.09□□□□□ -0.15
CAPN1-221ENST00000531068 ARFGEF1Q9Y6D6 1849 aa14.08□□□□□ -0.15
CAPN1-221ENST00000531068 TCERG1O14776 1098 aaKnown RBP14.08□□□□□ -0.16
CAPN1-221ENST00000531068 IARSP41252 1262 aaKnown RBP14.08□□□□□ -0.16
CAPN1-221ENST00000531068 GRAPQ13588 217 aa14.08□□□□□ -0.16
CAPN1-221ENST00000531068 SF3B3Q15393 1217 aaKnown RBP14.08□□□□□ -0.16
CAPN1-221ENST00000531068 SP8Q8IXZ3 490 aa14.08□□□□□ -0.16
CAPN1-221ENST00000531068 ZBTB38Q8NAP3 1195 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-221ENST00000531068 SUPT20HQ8NEM7 779 aa14.08□□□□□ -0.16
CAPN1-221ENST00000531068 GRAPLQ8TC17 118 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-221ENST00000531068 MYD88Q99836 296 aa14.08□□□□□ -0.16
CAPN1-221ENST00000531068 BRCA1P38398 1863 aaKnown RBP14.08□□□□□ -0.16
CAPN1-221ENST00000531068 IRS4O14654 1257 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-221ENST00000531068 NEXNQ0ZGT2 675 aa14.07□□□□□ -0.16
CAPN1-221ENST00000531068 SMC1BQ8NDV3 1235 aa14.07□□□□□ -0.16
CAPN1-221ENST00000531068 CWC25Q9NXE8 425 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-221ENST00000531068 MAP3K2Q9Y2U5 619 aa14.07□□□□□ -0.16
CAPN1-221ENST00000531068 PI4KAP2A4QPH2 592 aa14.06□□□□□ -0.16
CAPN1-221ENST00000531068 IQCA1LA6NCM1 817 aa14.06□□□□□ -0.16
CAPN1-221ENST00000531068 FZD9O00144 591 aa14.06□□□□□ -0.16
CAPN1-221ENST00000531068 VAMP4O75379 141 aa14.06□□□□□ -0.16
CAPN1-221ENST00000531068 DDNO94850 711 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-221ENST00000531068 APLP1P51693 650 aa14.06□□□□□ -0.16
CAPN1-221ENST00000531068 RTL5Q5HYW3 569 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-221ENST00000531068 PI4KAP1Q8N8J0 262 aa14.06□□□□□ -0.16
CAPN1-221ENST00000531068 ABCC4O15439 1325 aa14.06□□□□□ -0.16
CAPN1-221ENST00000531068 ZBED9Q6R2W3 1325 aa14.06□□□□□ -0.16
CAPN1-221ENST00000531068 FANCIQ9NVI1 1328 aa14.06□□□□□ -0.16
CAPN1-221ENST00000531068 PCCAP05165 728 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-221ENST00000531068 HNRNPUQ00839 825 aaKnown RBP eCLIP14.05□□□□□ -0.16
CAPN1-221ENST00000531068 DPP8Q6V1X1 898 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-221ENST00000531068 LARGE2Q8N3Y3 721 aa14.05□□□□□ -0.16
CAPN1-221ENST00000531068 ZNF428Q96B54 188 aa14.05□□□□□ -0.16
CAPN1-221ENST00000531068 ANKRD31Q8N7Z5 1873 aa14.05□□□□□ -0.16
CAPN1-221ENST00000531068 POTECB2RU33 542 aa14.04□□□□□ -0.16
CAPN1-221ENST00000531068 EIF6P56537 245 aaKnown RBP14.04□□□□□ -0.16
CAPN1-221ENST00000531068 EXOSC9Q06265 439 aaKnown RBP14.04□□□□□ -0.16
CAPN1-221ENST00000531068 MPNDQ8N594 471 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms