RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 RRP7AQ9Y3A4 280 aaKnown RBP6.16□□□□□ -1.42
SSBP3-213ENST00000530618 DUOX1Q9NRD9 1551 aa6.15□□□□□ -1.42
SSBP3-213ENST00000530618 H0YIN7 160 aa6.15□□□□□ -1.42
SSBP3-213ENST00000530618 C21orf2O43822 256 aa6.15□□□□□ -1.42
SSBP3-213ENST00000530618 CT47B1P0C2W7 299 aaPredicted RBP6.15□□□□□ -1.42
SSBP3-213ENST00000530618 STYK1Q6J9G0 422 aa6.15□□□□□ -1.42
SSBP3-213ENST00000530618 PRPF40BQ6NWY9 871 aaKnown RBP6.15□□□□□ -1.42
SSBP3-213ENST00000530618 OLFM4Q6UX06 510 aa6.15□□□□□ -1.42
SSBP3-213ENST00000530618 MCM10Q7L590 875 aa6.15□□□□□ -1.42
SSBP3-213ENST00000530618 LRP10Q7Z4F1 713 aa6.15□□□□□ -1.42
SSBP3-213ENST00000530618 ZNF428Q96B54 188 aa6.15□□□□□ -1.42
SSBP3-213ENST00000530618 TEX13AQ9BXU3 409 aaPredicted RBP6.15□□□□□ -1.42
SSBP3-213ENST00000530618 ZNF646O15015 1829 aaPredicted RBP6.15□□□□□ -1.43
SSBP3-213ENST00000530618 RGL2O15211 777 aa6.14□□□□□ -1.43
SSBP3-213ENST00000530618 HOXB7P09629 217 aa6.14□□□□□ -1.43
SSBP3-213ENST00000530618 VEGFAP15692 232 aaPredicted RBP6.14□□□□□ -1.43
SSBP3-213ENST00000530618 HLFQ16534 295 aa6.14□□□□□ -1.43
SSBP3-213ENST00000530618 DZIP3Q86Y13 1208 aaKnown RBP6.14□□□□□ -1.43
SSBP3-213ENST00000530618 CNBD1Q8NA66 436 aa6.14□□□□□ -1.43
SSBP3-213ENST00000530618 SMC1BQ8NDV3 1235 aa6.14□□□□□ -1.43
SSBP3-213ENST00000530618 PDZRN3Q9UPQ7 1066 aa6.14□□□□□ -1.43
SSBP3-213ENST00000530618 PASKQ96RG2 1323 aa6.14□□□□□ -1.43
SSBP3-213ENST00000530618 ZNF541Q9H0D2 1346 aa6.14□□□□□ -1.43
SSBP3-213ENST00000530618 PSME4Q14997 1843 aa6.13□□□□□ -1.43
SSBP3-213ENST00000530618 POLR2AP24928 1970 aaKnown RBP6.13□□□□□ -1.43
SSBP3-213ENST00000530618 DDNO94850 711 aaPredicted RBP6.13□□□□□ -1.43
SSBP3-213ENST00000530618 SNRPA1P09661 255 aaKnown RBP6.13□□□□□ -1.43
SSBP3-213ENST00000530618 PDE6BP35913 854 aa6.13□□□□□ -1.43
SSBP3-213ENST00000530618 CRY2Q49AN0 593 aa6.13□□□□□ -1.43
SSBP3-213ENST00000530618 CLEC4GQ6UXB4 293 aa6.13□□□□□ -1.43
SSBP3-213ENST00000530618 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.13□□□□□ -1.43
SSBP3-213ENST00000530618 ZNF622Q969S3 477 aaKnown RBP eCLIP6.13□□□□□ -1.43
SSBP3-213ENST00000530618 L3MBTL3Q96JM7 780 aaPredicted RBP6.13□□□□□ -1.43
SSBP3-213ENST00000530618 STK31Q9BXU1 1019 aa6.13□□□□□ -1.43
SSBP3-213ENST00000530618 TAOK3Q9H2K8 898 aa6.13□□□□□ -1.43
SSBP3-213ENST00000530618 ZNF219Q9P2Y4 722 aaPredicted RBP6.13□□□□□ -1.43
SSBP3-213ENST00000530618 TRIM35Q9UPQ4 493 aa6.13□□□□□ -1.43
SSBP3-213ENST00000530618 UBN2Q6ZU65 1347 aa6.13□□□□□ -1.43
SSBP3-213ENST00000530618 IBTKQ9P2D0 1353 aaPredicted RBP6.13□□□□□ -1.43
SSBP3-213ENST00000530618 SCN9AQ15858 1988 aa6.13□□□□□ -1.43
SSBP3-213ENST00000530618 TNRC18O15417 2968 aaPredicted RBP6.12□□□□□ -1.43
SSBP3-213ENST00000530618 CHL1O00533 1208 aa6.12□□□□□ -1.43
SSBP3-213ENST00000530618 ITGBL1O95965 494 aaPredicted RBP6.12□□□□□ -1.43
SSBP3-213ENST00000530618 ERFEQ4G0M1 354 aa6.12□□□□□ -1.43
SSBP3-213ENST00000530618 CCDC30Q5VVM6 783 aa6.12□□□□□ -1.43
SSBP3-213ENST00000530618 TTLL7Q6ZT98 887 aa6.12□□□□□ -1.43
SSBP3-213ENST00000530618 C3orf67Q6ZVT6 689 aa6.12□□□□□ -1.43
SSBP3-213ENST00000530618 C16orf71Q8IYS4 520 aaPredicted RBP6.12□□□□□ -1.43
SSBP3-213ENST00000530618 MASTLQ96GX5 879 aa6.12□□□□□ -1.43
SSBP3-213ENST00000530618 SETDB2Q96T68 719 aa6.12□□□□□ -1.43
SSBP3-213ENST00000530618 MIS18AQ9NYP9 233 aa6.12□□□□□ -1.43
SSBP3-213ENST00000530618 ZNF330Q9Y3S2 320 aaPredicted RBP6.12□□□□□ -1.43
SSBP3-213ENST00000530618 CNTNAP1P78357 1384 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 ERBB4Q15303 1308 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 ZNF521Q96K83 1311 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 FANCIQ9NVI1 1328 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 HSPA1AP0DMV8 641 aaKnown RBP6.11□□□□□ -1.43
SSBP3-213ENST00000530618 HSPA1BP0DMV9 641 aaKnown RBP6.11□□□□□ -1.43
SSBP3-213ENST00000530618 MS4A1P11836 297 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 NPR1P16066 1061 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 EIF4A1P60842 406 aaKnown RBP6.11□□□□□ -1.43
SSBP3-213ENST00000530618 SLFN5Q08AF3 891 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 PDIA6Q15084 440 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 CHADLQ6NUI6 762 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 CNKSR1Q969H4 720 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 THUMPD2Q9BTF0 503 aaKnown RBP6.11□□□□□ -1.43
SSBP3-213ENST00000530618 TAF1DQ9H5J8 278 aaPredicted RBP6.11□□□□□ -1.43
SSBP3-213ENST00000530618 ZNF277Q9NRM2 450 aaPredicted RBP6.11□□□□□ -1.43
SSBP3-213ENST00000530618 MBIPQ9NS73 344 aa6.11□□□□□ -1.43
SSBP3-213ENST00000530618 MAP3K15Q6ZN16 1313 aa6.1□□□□□ -1.43
SSBP3-213ENST00000530618 KIF16BQ96L93 1317 aa6.1□□□□□ -1.43
SSBP3-213ENST00000530618 FZD9O00144 591 aa6.1□□□□□ -1.43
SSBP3-213ENST00000530618 IPO8O15397 1037 aaKnown RBP6.1□□□□□ -1.43
SSBP3-213ENST00000530618 NTSR2O95665 410 aa6.1□□□□□ -1.43
SSBP3-213ENST00000530618 DDX58O95786 925 aaKnown RBP6.1□□□□□ -1.43
SSBP3-213ENST00000530618 HOXA10P31260 410 aaPredicted RBP6.1□□□□□ -1.43
SSBP3-213ENST00000530618 ST5P78524 1137 aa6.1□□□□□ -1.43
SSBP3-213ENST00000530618 FKBP4Q02790 459 aaKnown RBP eCLIP6.1□□□□□ -1.43
SSBP3-213ENST00000530618 TWISTNBQ3B726 338 aaPredicted RBP6.1□□□□□ -1.43
SSBP3-213ENST00000530618 CCDC93Q567U6 631 aa6.1□□□□□ -1.43
SSBP3-213ENST00000530618 HDGFL1Q5TGJ6 251 aa6.1□□□□□ -1.43
SSBP3-213ENST00000530618 NBPF5PQ86XG9 351 aaPredicted RBP6.1□□□□□ -1.43
SSBP3-213ENST00000530618 ZNF34Q8IZ26 560 aa6.1□□□□□ -1.43
SSBP3-213ENST00000530618 NIP7Q9Y221 180 aaKnown RBP eCLIP6.1□□□□□ -1.43
SSBP3-213ENST00000530618 ERVV-1B6SEH8 477 aa6.09□□□□□ -1.43
SSBP3-213ENST00000530618 ZNF853P0CG23 659 aa6.09□□□□□ -1.43
SSBP3-213ENST00000530618 PROSER3Q2NL68 480 aa6.09□□□□□ -1.43
SSBP3-213ENST00000530618 ALDH1L2Q3SY69 923 aa6.09□□□□□ -1.43
SSBP3-213ENST00000530618 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
SSBP3-213ENST00000530618 SOGA3Q5TF21 947 aa6.09□□□□□ -1.43
SSBP3-213ENST00000530618 DUSP27Q5VZP5 1158 aa6.09□□□□□ -1.43
SSBP3-213ENST00000530618 LDHDQ86WU2 507 aa6.09□□□□□ -1.43
SSBP3-213ENST00000530618 NUTM1Q86Y26 1132 aa6.09□□□□□ -1.43
SSBP3-213ENST00000530618 TSR2Q969E8 191 aaKnown RBP6.09□□□□□ -1.43
SSBP3-213ENST00000530618 PSMD1Q99460 953 aa6.09□□□□□ -1.43
SSBP3-213ENST00000530618 CHMP4BQ9H444 224 aaKnown RBP6.09□□□□□ -1.43
SSBP3-213ENST00000530618 CREBZFQ9NS37 354 aa6.09□□□□□ -1.43
SSBP3-213ENST00000530618 DBF4Q9UBU7 674 aaPredicted RBP6.09□□□□□ -1.43
SSBP3-213ENST00000530618 U3KPZ7 1027 aaPredicted RBP6.09□□□□□ -1.43
SSBP3-213ENST00000530618 A0A1B0GUL6 1792 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms