RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 SLC15A2Q16348 729 aa13.41□□□□□ -0.26
SOX6-213ENST00000530378 TBC1D9BQ66K14 1250 aa13.41□□□□□ -0.26
SOX6-213ENST00000530378 MSL1Q68DK7 614 aa13.41□□□□□ -0.26
SOX6-213ENST00000530378 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
SOX6-213ENST00000530378 UBE3BQ7Z3V4 1068 aa13.41□□□□□ -0.26
SOX6-213ENST00000530378 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
SOX6-213ENST00000530378 NIP7Q9Y221 180 aaKnown RBP eCLIP13.41□□□□□ -0.26
SOX6-213ENST00000530378 LRP5O75197 1615 aa13.4□□□□□ -0.26
SOX6-213ENST00000530378 QSER1Q2KHR3 1735 aa13.4□□□□□ -0.26
SOX6-213ENST00000530378 ALDH1L1O75891 902 aa13.4□□□□□ -0.26
SOX6-213ENST00000530378 ISCA1Q9BUE6 129 aa13.4□□□□□ -0.26
SOX6-213ENST00000530378 PDGFDQ9GZP0 370 aaPredicted RBP13.4□□□□□ -0.26
SOX6-213ENST00000530378 ZBTB40Q9NUA8 1239 aa13.4□□□□□ -0.26
SOX6-213ENST00000530378 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
SOX6-213ENST00000530378 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
SOX6-213ENST00000530378 GRM8O00222 908 aa13.39□□□□□ -0.27
SOX6-213ENST00000530378 UBTFL1P0CB47 393 aaPredicted RBP13.39□□□□□ -0.27
SOX6-213ENST00000530378 HSP90AB3PQ58FF7 597 aa13.39□□□□□ -0.27
SOX6-213ENST00000530378 NLRP10Q86W26 655 aa13.39□□□□□ -0.27
SOX6-213ENST00000530378 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
SOX6-213ENST00000530378 PCDHB15Q9Y5E8 787 aa13.39□□□□□ -0.27
SOX6-213ENST00000530378 COL24A1Q17RW2 1714 aa13.39□□□□□ -0.27
SOX6-213ENST00000530378 CASZ1Q86V15 1759 aa13.39□□□□□ -0.27
SOX6-213ENST00000530378 ZNF34Q8IZ26 560 aa13.39□□□□□ -0.27
SOX6-213ENST00000530378 FAM89AQ96GI7 184 aa13.39□□□□□ -0.27
SOX6-213ENST00000530378 GYS1P13807 737 aa13.38□□□□□ -0.27
SOX6-213ENST00000530378 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
SOX6-213ENST00000530378 SUSD4Q5VX71 490 aa13.37□□□□□ -0.27
SOX6-213ENST00000530378 NUTM1Q86Y26 1132 aa13.37□□□□□ -0.27
SOX6-213ENST00000530378 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
SOX6-213ENST00000530378 SUCLG2Q96I99 432 aa13.37□□□□□ -0.27
SOX6-213ENST00000530378 TRMT112Q9UI30 125 aaKnown RBP13.37□□□□□ -0.27
SOX6-213ENST00000530378 MYH3P11055 1940 aa13.37□□□□□ -0.27
SOX6-213ENST00000530378 GNAI2P04899 355 aa13.36□□□□□ -0.27
SOX6-213ENST00000530378 GNAI3P08754 354 aa13.36□□□□□ -0.27
SOX6-213ENST00000530378 CCDC136Q96JN2 1154 aa13.36□□□□□ -0.27
SOX6-213ENST00000530378 PPP4R2Q9NY27 417 aa13.36□□□□□ -0.27
SOX6-213ENST00000530378 DDX60Q8IY21 1712 aaKnown RBP13.36□□□□□ -0.27
SOX6-213ENST00000530378 NFIXQ14938 502 aa13.36□□□□□ -0.27
SOX6-213ENST00000530378 PSDA5PKW4 1024 aaPredicted RBP13.35□□□□□ -0.27
SOX6-213ENST00000530378 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
SOX6-213ENST00000530378 R3HDM1Q15032 1099 aaKnown RBP13.35□□□□□ -0.27
SOX6-213ENST00000530378 EPHA10Q5JZY3 1008 aa13.35□□□□□ -0.27
SOX6-213ENST00000530378 CLEC4GQ6UXB4 293 aa13.35□□□□□ -0.27
SOX6-213ENST00000530378 CCDC85AQ96PX6 553 aaPredicted RBP13.35□□□□□ -0.27
SOX6-213ENST00000530378 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
SOX6-213ENST00000530378 LAMB2P55268 1798 aa13.35□□□□□ -0.27
SOX6-213ENST00000530378 NTSR2O95665 410 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 CASP7P55210 303 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 KAZALD1Q96I82 304 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 UTP14AQ9BVJ6 771 aaKnown RBP13.34□□□□□ -0.27
SOX6-213ENST00000530378 CHMP4BQ9H444 224 aaKnown RBP13.34□□□□□ -0.27
SOX6-213ENST00000530378 BICC1Q9H694 974 aaKnown RBP13.34□□□□□ -0.27
SOX6-213ENST00000530378 ABCC12Q96J65 1359 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 TNRC6CQ9HCJ0 1690 aaKnown RBP13.34□□□□□ -0.27
SOX6-213ENST00000530378 H7C1W4 665 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 NPHP1O15259 732 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 HCLS1P14317 486 aaPredicted RBP13.34□□□□□ -0.27
SOX6-213ENST00000530378 DDR1Q08345 913 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
SOX6-213ENST00000530378 ERFEQ4G0M1 354 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 CEP85Q6P2H3 762 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 NBPF5PQ86XG9 351 aaPredicted RBP13.34□□□□□ -0.27
SOX6-213ENST00000530378 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 CHMP3Q9Y3E7 222 aa13.34□□□□□ -0.27
SOX6-213ENST00000530378 CARMIL3Q8ND23 1372 aa13.33□□□□□ -0.28
SOX6-213ENST00000530378 UTYO14607 1347 aa13.33□□□□□ -0.28
SOX6-213ENST00000530378 PCCAP05165 728 aaPredicted RBP13.33□□□□□ -0.28
SOX6-213ENST00000530378 PARP10Q53GL7 1025 aa13.33□□□□□ -0.28
SOX6-213ENST00000530378 ERICH6BQ5W0A0 696 aa13.33□□□□□ -0.28
SOX6-213ENST00000530378 SIRT2Q8IXJ6 389 aa13.33□□□□□ -0.28
SOX6-213ENST00000530378 ZBTB38Q8NAP3 1195 aaPredicted RBP13.33□□□□□ -0.28
SOX6-213ENST00000530378 BCL11AQ9H165 835 aa13.33□□□□□ -0.28
SOX6-213ENST00000530378 SPEF2Q9C093 1822 aa13.32□□□□□ -0.28
SOX6-213ENST00000530378 PNMA6EA0A0J9YXQ4 647 aa13.32□□□□□ -0.28
SOX6-213ENST00000530378 IRS4O14654 1257 aaPredicted RBP13.32□□□□□ -0.28
SOX6-213ENST00000530378 IGHDP01880 384 aa13.32□□□□□ -0.28
SOX6-213ENST00000530378 GTF2E1P29083 439 aaPredicted RBP13.32□□□□□ -0.28
SOX6-213ENST00000530378 PPP1R42Q7Z4L9 355 aa13.32□□□□□ -0.28
SOX6-213ENST00000530378 ANKRD44Q8N8A2 993 aa13.32□□□□□ -0.28
SOX6-213ENST00000530378 SH3TC1Q8TE82 1336 aa13.32□□□□□ -0.28
SOX6-213ENST00000530378 TAF1P21675 1872 aa13.32□□□□□ -0.28
SOX6-213ENST00000530378 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
SOX6-213ENST00000530378 ZBTB7AO95365 584 aa13.31□□□□□ -0.28
SOX6-213ENST00000530378 MMP10P09238 476 aa13.31□□□□□ -0.28
SOX6-213ENST00000530378 APBB1O00213 710 aa13.3□□□□□ -0.28
SOX6-213ENST00000530378 FOXO4P98177 505 aa13.3□□□□□ -0.28
SOX6-213ENST00000530378 LMBR1LQ6UX01 489 aa13.3□□□□□ -0.28
SOX6-213ENST00000530378 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
SOX6-213ENST00000530378 CNBD1Q8NA66 436 aa13.3□□□□□ -0.28
SOX6-213ENST00000530378 CDHR2Q9BYE9 1310 aa13.3□□□□□ -0.28
SOX6-213ENST00000530378 POLRMTO00411 1230 aaKnown RBP13.29□□□□□ -0.28
SOX6-213ENST00000530378 SERPINB2P05120 415 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 TM4SF1P30408 202 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 AAMPQ13685 434 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 KLHDC4Q8TBB5 520 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 ANKRD31Q8N7Z5 1873 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 COL4A1P02462 1669 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 RGL2O15211 777 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms