RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 KCNB2Q92953 911 aa11.07□□□□□ -0.64
TRIM49D1-202ENST00000530311 EDC3Q96F86 508 aaKnown RBP11.07□□□□□ -0.64
TRIM49D1-202ENST00000530311 CCDC171Q6TFL3 1326 aa11.07□□□□□ -0.64
TRIM49D1-202ENST00000530311 A0A0D9SFI3 127 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 NPM3O75607 178 aaKnown RBP11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 KCNJ4P48050 445 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 PIP4K2AP48426 406 aaPredicted RBP11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 G3BP1Q13283 466 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 EPHA10Q5JZY3 1008 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 GPATCH3Q96I76 525 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 HEG1Q9ULI3 1381 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 SLC27A2O14975 620 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 FERMT3Q86UX7 667 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 ERC1Q8IUD2 1116 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 LINS1Q8NG48 757 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 MAP4K1Q92918 833 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 CHMP4AQ9BY43 222 aa11.06□□□□□ -0.64
TRIM49D1-202ENST00000530311 ZNF142P52746 1687 aaPredicted RBP11.05□□□□□ -0.64
TRIM49D1-202ENST00000530311 ADCY5O95622 1261 aa11.05□□□□□ -0.64
TRIM49D1-202ENST00000530311 CHGBP05060 677 aa11.05□□□□□ -0.64
TRIM49D1-202ENST00000530311 MCM5P33992 734 aa11.05□□□□□ -0.64
TRIM49D1-202ENST00000530311 RIC3Q7Z5B4 369 aa11.05□□□□□ -0.64
TRIM49D1-202ENST00000530311 C17orf53Q8N3J3 647 aaPredicted RBP11.05□□□□□ -0.64
TRIM49D1-202ENST00000530311 TM6SF1Q9BZW5 370 aa11.05□□□□□ -0.64
TRIM49D1-202ENST00000530311 CHMP3Q9Y3E7 222 aa11.05□□□□□ -0.64
TRIM49D1-202ENST00000530311 NDUFB9Q9Y6M9 179 aa11.05□□□□□ -0.64
TRIM49D1-202ENST00000530311 CRYBG1Q9Y4K1 1723 aa11.05□□□□□ -0.64
TRIM49D1-202ENST00000530311 AP5Z1O43299 807 aa11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 ZKSCAN1P17029 563 aaPredicted RBP11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 ZNF589Q86UQ0 364 aaPredicted RBP11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 ANKLE2Q86XL3 938 aa11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 ZSCAN31Q96LW9 406 aaPredicted RBP11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 TTC12Q9H892 705 aaPredicted RBP11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 DDX21Q9NR30 783 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 UQCRHLA0A096LP55 91 aa11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 UQCRHP07919 91 aa11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 ZC3H6P61129 1189 aaKnown RBP11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 FSD1Q9BTV5 496 aa11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 FUCA2Q9BTY2 467 aa11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 FAM13BQ9NYF5 915 aa11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
TRIM49D1-202ENST00000530311 STK3Q13188 491 aa11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 UVSSAQ2YD98 709 aa11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 LARP1BQ659C4 914 aaKnown RBP11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 CDC37L1Q7L3B6 337 aa11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 XAGE3Q8WTP9 111 aa11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 SH2B1Q9NRF2 756 aaPredicted RBP11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 ATP6V1DQ9Y5K8 247 aa11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 UTYO14607 1347 aa11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 FAM184AQ8NB25 1140 aa11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 NFATC2IPQ8NCF5 419 aa11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 MYD88Q99836 296 aa11.03□□□□□ -0.64
TRIM49D1-202ENST00000530311 NEURL1BA8MQ27 555 aa11.02□□□□□ -0.65
TRIM49D1-202ENST00000530311 KDM4AO75164 1064 aa11.02□□□□□ -0.65
TRIM49D1-202ENST00000530311 DDX58O95786 925 aaKnown RBP11.02□□□□□ -0.65
TRIM49D1-202ENST00000530311 TERF1P54274 439 aa11.02□□□□□ -0.65
TRIM49D1-202ENST00000530311 KIAA2012Q0VF49 1180 aa11.02□□□□□ -0.65
TRIM49D1-202ENST00000530311 CSPP1Q1MSJ5 1256 aa11.02□□□□□ -0.65
TRIM49D1-202ENST00000530311 ZNF790Q6PG37 636 aa11.02□□□□□ -0.65
TRIM49D1-202ENST00000530311 TTC6Q86TZ1 520 aa11.02□□□□□ -0.65
TRIM49D1-202ENST00000530311 LETM1O95202 739 aaPredicted RBP11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 LIG1P18858 919 aa11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 TOB2Q14106 344 aaPredicted RBP11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 GCKRQ14397 625 aa11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 CAMK4Q16566 473 aa11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 TFIP11Q9UBB9 837 aaKnown RBP11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 RPS6KB1P23443 525 aa11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 LARP1Q6PKG0 1096 aaKnown RBP11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 BLOC1S2Q6QNY1 142 aa11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 CCDC129Q6ZRS4 1044 aa11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 USP16Q9Y5T5 823 aa11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 COL15A1P39059 1388 aa11.01□□□□□ -0.65
TRIM49D1-202ENST00000530311 ADGRL3Q9HAR2 1447 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 TFCP2Q12800 502 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 KRT28Q7Z3Y7 464 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 SEC62Q99442 399 aaKnown RBP11□□□□□ -0.65
TRIM49D1-202ENST00000530311 PDCL3Q9H2J4 239 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 SNRKQ9NRH2 765 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 HDAC5Q9UQL6 1122 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 HIP1O00291 1037 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 TAF5LO75529 589 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 TRHP20396 242 aaPredicted RBP11□□□□□ -0.65
TRIM49D1-202ENST00000530311 PSMA5P28066 241 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 VSIG10Q8N0Z9 540 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 DDX17Q92841 729 aaKnown RBP11□□□□□ -0.65
TRIM49D1-202ENST00000530311 ZNF496Q96IT1 587 aaPredicted RBP11□□□□□ -0.65
TRIM49D1-202ENST00000530311 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
TRIM49D1-202ENST00000530311 DBNLQ9UJU6 430 aaKnown RBP11□□□□□ -0.65
TRIM49D1-202ENST00000530311 NCAPD2Q15021 1401 aa10.99□□□□□ -0.65
TRIM49D1-202ENST00000530311 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
TRIM49D1-202ENST00000530311 JAK2O60674 1132 aa10.99□□□□□ -0.65
TRIM49D1-202ENST00000530311 PTCD1O75127 700 aaKnown RBP10.99□□□□□ -0.65
TRIM49D1-202ENST00000530311 NOLC1Q14978 699 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRIM49D1-202ENST00000530311 SLFNL1Q499Z3 407 aa10.99□□□□□ -0.65
TRIM49D1-202ENST00000530311 DNTTIP2Q5QJE6 756 aaKnown RBP10.99□□□□□ -0.65
TRIM49D1-202ENST00000530311 SASS6Q6UVJ0 657 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms