RNA–Protein interactions for RNA: ENST00000530216.5

SHARPIN-204, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-204ENST00000530216 STK31Q9BXU1 1019 aa20.35■□□□□ 0.85
SHARPIN-204ENST00000530216 TRMT112Q9UI30 125 aaKnown RBP20.35■□□□□ 0.85
SHARPIN-204ENST00000530216 WDR63Q8IWG1 891 aa20.34■□□□□ 0.85
SHARPIN-204ENST00000530216 RBM17Q96I25 401 aaKnown RBP20.34■□□□□ 0.85
SHARPIN-204ENST00000530216 SBF1O95248 1867 aa20.34■□□□□ 0.85
SHARPIN-204ENST00000530216 SLX4Q8IY92 1834 aa20.34■□□□□ 0.85
SHARPIN-204ENST00000530216 ABCC12Q96J65 1359 aa20.34■□□□□ 0.85
SHARPIN-204ENST00000530216 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.85
SHARPIN-204ENST00000530216 KDM2BQ8NHM5 1336 aa20.33■□□□□ 0.85
SHARPIN-204ENST00000530216 DDX58O95786 925 aaKnown RBP20.33■□□□□ 0.85
SHARPIN-204ENST00000530216 NLRP10Q86W26 655 aa20.33■□□□□ 0.85
SHARPIN-204ENST00000530216 TMX4Q9H1E5 349 aaPredicted RBP20.33■□□□□ 0.85
SHARPIN-204ENST00000530216 TAOK3Q9H2K8 898 aa20.33■□□□□ 0.85
SHARPIN-204ENST00000530216 ANKRD36CQ5JPF3 1778 aa20.32■□□□□ 0.84
SHARPIN-204ENST00000530216 TWISTNBQ3B726 338 aaPredicted RBP20.32■□□□□ 0.84
SHARPIN-204ENST00000530216 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
SHARPIN-204ENST00000530216 SH3TC1Q8TE82 1336 aa20.31■□□□□ 0.84
SHARPIN-204ENST00000530216 CCDC88AQ3V6T2 1871 aa20.31■□□□□ 0.84
SHARPIN-204ENST00000530216 NFKBIEO00221 500 aa20.31■□□□□ 0.84
SHARPIN-204ENST00000530216 CRY2Q49AN0 593 aa20.31■□□□□ 0.84
SHARPIN-204ENST00000530216 RTKN2Q8IZC4 609 aa20.31■□□□□ 0.84
SHARPIN-204ENST00000530216 TSPYL6Q8N831 410 aa20.31■□□□□ 0.84
SHARPIN-204ENST00000530216 PHAXQ9H814 394 aaKnown RBP20.31■□□□□ 0.84
SHARPIN-204ENST00000530216 ARFGEF2Q9Y6D5 1785 aa20.31■□□□□ 0.84
SHARPIN-204ENST00000530216 ZC3H4Q9UPT8 1303 aaKnown RBP20.3■□□□□ 0.84
SHARPIN-204ENST00000530216 ATP5J2-PTCD1G3V325 749 aa20.3■□□□□ 0.84
SHARPIN-204ENST00000530216 SLC10A5Q5PT55 438 aa20.3■□□□□ 0.84
SHARPIN-204ENST00000530216 C16orf71Q8IYS4 520 aaPredicted RBP20.3■□□□□ 0.84
SHARPIN-204ENST00000530216 RIC1Q4ADV7 1423 aa20.29■□□□□ 0.84
SHARPIN-204ENST00000530216 ZNF428Q96B54 188 aa20.29■□□□□ 0.84
SHARPIN-204ENST00000530216 LTBP3Q9NS15 1303 aa20.28■□□□□ 0.84
SHARPIN-204ENST00000530216 HCLS1P14317 486 aaPredicted RBP20.28■□□□□ 0.84
SHARPIN-204ENST00000530216 HOXA10P31260 410 aaPredicted RBP20.28■□□□□ 0.84
SHARPIN-204ENST00000530216 DPY19L2Q6NUT2 758 aa20.28■□□□□ 0.84
SHARPIN-204ENST00000530216 CRAMP1Q96RY5 1269 aa20.28■□□□□ 0.84
SHARPIN-204ENST00000530216 MYH16Q9H6N6 1097 aa20.28■□□□□ 0.84
SHARPIN-204ENST00000530216 TNRC6CQ9HCJ0 1690 aaKnown RBP20.28■□□□□ 0.84
SHARPIN-204ENST00000530216 FER1L6Q2WGJ9 1857 aa20.28■□□□□ 0.84
SHARPIN-204ENST00000530216 FANCIQ9NVI1 1328 aa20.27■□□□□ 0.84
SHARPIN-204ENST00000530216 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
SHARPIN-204ENST00000530216 CC2D2BQ6DHV5 1058 aa20.27■□□□□ 0.84
SHARPIN-204ENST00000530216 C7orf43Q8WVR3 580 aa20.27■□□□□ 0.84
SHARPIN-204ENST00000530216 SLC4A2P04920 1241 aa20.26■□□□□ 0.83
SHARPIN-204ENST00000530216 FKBP4Q02790 459 aaKnown RBP eCLIP20.26■□□□□ 0.83
SHARPIN-204ENST00000530216 DDX46Q7L014 1031 aaKnown RBP20.26■□□□□ 0.83
SHARPIN-204ENST00000530216 MYD88Q99836 296 aa20.26■□□□□ 0.83
SHARPIN-204ENST00000530216 ISCA1Q9BUE6 129 aa20.26■□□□□ 0.83
SHARPIN-204ENST00000530216 NMRK2Q9NPI5 230 aa20.26■□□□□ 0.83
SHARPIN-204ENST00000530216 PPEF1O14829 653 aaPredicted RBP20.25■□□□□ 0.83
SHARPIN-204ENST00000530216 HSP90B1P14625 803 aaKnown RBP20.25■□□□□ 0.83
SHARPIN-204ENST00000530216 PRELPP51888 382 aa20.25■□□□□ 0.83
SHARPIN-204ENST00000530216 GRIPAP1Q4V328 841 aa20.25■□□□□ 0.83
SHARPIN-204ENST00000530216 RTL5Q5HYW3 569 aaPredicted RBP20.25■□□□□ 0.83
SHARPIN-204ENST00000530216 FAM89AQ96GI7 184 aa20.25■□□□□ 0.83
SHARPIN-204ENST00000530216 GLTPD2A6NH11 291 aa20.24■□□□□ 0.83
SHARPIN-204ENST00000530216 KIF3CO14782 793 aa20.24■□□□□ 0.83
SHARPIN-204ENST00000530216 NEXNQ0ZGT2 675 aa20.24■□□□□ 0.83
SHARPIN-204ENST00000530216 TRIM28Q13263 835 aaKnown RBP20.24■□□□□ 0.83
SHARPIN-204ENST00000530216 OLFM4Q6UX06 510 aa20.24■□□□□ 0.83
SHARPIN-204ENST00000530216 C3orf67Q6ZVT6 689 aa20.24■□□□□ 0.83
SHARPIN-204ENST00000530216 SYNE4Q8N205 404 aa20.24■□□□□ 0.83
SHARPIN-204ENST00000530216 RRAGCQ9HB90 399 aa20.24■□□□□ 0.83
SHARPIN-204ENST00000530216 EXOSC9Q06265 439 aaKnown RBP20.23■□□□□ 0.83
SHARPIN-204ENST00000530216 KSR2Q6VAB6 950 aa20.23■□□□□ 0.83
SHARPIN-204ENST00000530216 ZNF277Q9NRM2 450 aaPredicted RBP20.23■□□□□ 0.83
SHARPIN-204ENST00000530216 MAP3K2Q9Y2U5 619 aa20.23■□□□□ 0.83
SHARPIN-204ENST00000530216 BBOX1O75936 387 aa20.22■□□□□ 0.83
SHARPIN-204ENST00000530216 TOMM70O94826 608 aa20.22■□□□□ 0.83
SHARPIN-204ENST00000530216 CCDC191Q8NCU4 936 aa20.22■□□□□ 0.83
SHARPIN-204ENST00000530216 METTL22Q9BUU2 404 aaPredicted RBP20.22■□□□□ 0.83
SHARPIN-204ENST00000530216 CWC25Q9NXE8 425 aaPredicted RBP20.22■□□□□ 0.83
SHARPIN-204ENST00000530216 TIAM2Q8IVF5 1701 aa20.22■□□□□ 0.83
SHARPIN-204ENST00000530216 DICER1Q9UPY3 1922 aaKnown RBP20.21■□□□□ 0.83
SHARPIN-204ENST00000530216 PI4KAP2A4QPH2 592 aa20.21■□□□□ 0.83
SHARPIN-204ENST00000530216 CCER2I3L3R5 266 aa20.21■□□□□ 0.83
SHARPIN-204ENST00000530216 IRS4O14654 1257 aaPredicted RBP20.21■□□□□ 0.83
SHARPIN-204ENST00000530216 PI4KAP1Q8N8J0 262 aa20.21■□□□□ 0.83
SHARPIN-204ENST00000530216 ZBTB38Q8NAP3 1195 aaPredicted RBP20.21■□□□□ 0.83
SHARPIN-204ENST00000530216 VAMP4O75379 141 aa20.2■□□□□ 0.82
SHARPIN-204ENST00000530216 VEGFAP15692 232 aaPredicted RBP20.2■□□□□ 0.82
SHARPIN-204ENST00000530216 JDP2Q8WYK2 163 aa20.2■□□□□ 0.82
SHARPIN-204ENST00000530216 PSMD1Q99460 953 aa20.2■□□□□ 0.82
SHARPIN-204ENST00000530216 ABCC4O15439 1325 aa20.2■□□□□ 0.82
SHARPIN-204ENST00000530216 IARSP41252 1262 aaKnown RBP20.19■□□□□ 0.82
SHARPIN-204ENST00000530216 FKBP5Q13451 457 aaPredicted RBP20.19■□□□□ 0.82
SHARPIN-204ENST00000530216 ATP6V0A2Q9Y487 856 aa20.19■□□□□ 0.82
SHARPIN-204ENST00000530216 GRAPQ13588 217 aa20.18■□□□□ 0.82
SHARPIN-204ENST00000530216 GRAPLQ8TC17 118 aaPredicted RBP20.18■□□□□ 0.82
SHARPIN-204ENST00000530216 SPINK5Q9NQ38 1064 aaPredicted RBP20.18■□□□□ 0.82
SHARPIN-204ENST00000530216 LAMB2P55268 1798 aa20.18■□□□□ 0.82
SHARPIN-204ENST00000530216 FLIIQ13045 1269 aa20.17■□□□□ 0.82
SHARPIN-204ENST00000530216 G2E3Q7L622 706 aa20.17■□□□□ 0.82
SHARPIN-204ENST00000530216 TMC4Q7Z404 712 aa20.17■□□□□ 0.82
SHARPIN-204ENST00000530216 CACNA1FO60840 1977 aa20.17■□□□□ 0.82
SHARPIN-204ENST00000530216 PCCAP05165 728 aaPredicted RBP20.16■□□□□ 0.82
SHARPIN-204ENST00000530216 SF3B3Q15393 1217 aaKnown RBP20.16■□□□□ 0.82
SHARPIN-204ENST00000530216 DPP8Q6V1X1 898 aaPredicted RBP20.16■□□□□ 0.82
SHARPIN-204ENST00000530216 SP8Q8IXZ3 490 aa20.16■□□□□ 0.82
SHARPIN-204ENST00000530216 SUPT20HQ8NEM7 779 aa20.16■□□□□ 0.82
SHARPIN-204ENST00000530216 LARGE2Q8N3Y3 721 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms