RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 ELL2O00472 640 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-214ENST00000530141 PRELPP51888 382 aa10.32□□□□□ -0.76
CMTM1-214ENST00000530141 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
CMTM1-214ENST00000530141 IL17REQ8NFR9 667 aa10.32□□□□□ -0.76
CMTM1-214ENST00000530141 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
CMTM1-214ENST00000530141 RBM19Q9Y4C8 960 aaKnown RBP10.32□□□□□ -0.76
CMTM1-214ENST00000530141 RNMTO43148 476 aaKnown RBP10.31□□□□□ -0.76
CMTM1-214ENST00000530141 ZCRB1Q8TBF4 217 aaKnown RBP10.31□□□□□ -0.76
CMTM1-214ENST00000530141 BCS1LQ9Y276 419 aa10.31□□□□□ -0.76
CMTM1-214ENST00000530141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
CMTM1-214ENST00000530141 INTS3Q68E01 1043 aaKnown RBP10.3□□□□□ -0.76
CMTM1-214ENST00000530141 IFNL2Q8IZJ0 200 aa10.3□□□□□ -0.76
CMTM1-214ENST00000530141 VSIG10Q8N0Z9 540 aa10.3□□□□□ -0.76
CMTM1-214ENST00000530141 AK7Q96M32 723 aa10.3□□□□□ -0.76
CMTM1-214ENST00000530141 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
CMTM1-214ENST00000530141 ZBTB40Q9NUA8 1239 aa10.3□□□□□ -0.76
CMTM1-214ENST00000530141 A0A0G2JLW4 131 aa10.29□□□□□ -0.76
CMTM1-214ENST00000530141 BTBD11A6QL63 1104 aa10.29□□□□□ -0.76
CMTM1-214ENST00000530141 STK25O00506 426 aa10.29□□□□□ -0.76
CMTM1-214ENST00000530141 HSPA1AP0DMV8 641 aaKnown RBP10.29□□□□□ -0.76
CMTM1-214ENST00000530141 HSPA1BP0DMV9 641 aaKnown RBP10.29□□□□□ -0.76
CMTM1-214ENST00000530141 CCT4P50991 539 aaKnown RBP10.29□□□□□ -0.76
CMTM1-214ENST00000530141 MPRIPQ6WCQ1 1025 aa10.29□□□□□ -0.76
CMTM1-214ENST00000530141 ARHGAP27Q6ZUM4 889 aa10.29□□□□□ -0.76
CMTM1-214ENST00000530141 JMYQ8N9B5 988 aa10.29□□□□□ -0.76
CMTM1-214ENST00000530141 LINC00116Q8NCU8 138 aa10.29□□□□□ -0.76
CMTM1-214ENST00000530141 TNNQ9UQP3 1299 aa10.29□□□□□ -0.76
CMTM1-214ENST00000530141 TNRC6CQ9HCJ0 1690 aaKnown RBP10.28□□□□□ -0.76
CMTM1-214ENST00000530141 PCNTO95613 3336 aa10.28□□□□□ -0.76
CMTM1-214ENST00000530141 GCC1Q96CN9 775 aa10.28□□□□□ -0.76
CMTM1-214ENST00000530141 PCDHB15Q9Y5E8 787 aa10.28□□□□□ -0.76
CMTM1-214ENST00000530141 STK24Q9Y6E0 443 aa10.28□□□□□ -0.76
CMTM1-214ENST00000530141 ARFGEF1Q9Y6D6 1849 aa10.28□□□□□ -0.76
CMTM1-214ENST00000530141 C4AP0C0L4 1744 aa10.27□□□□□ -0.76
CMTM1-214ENST00000530141 ZBTB7BO15156 539 aaPredicted RBP10.27□□□□□ -0.77
CMTM1-214ENST00000530141 IGHDP01880 384 aa10.27□□□□□ -0.77
CMTM1-214ENST00000530141 MMP10P09238 476 aa10.27□□□□□ -0.77
CMTM1-214ENST00000530141 EIF4A1P60842 406 aaKnown RBP10.27□□□□□ -0.77
CMTM1-214ENST00000530141 C9orf131Q5VYM1 1079 aa10.27□□□□□ -0.77
CMTM1-214ENST00000530141 DCAF5Q96JK2 942 aa10.27□□□□□ -0.77
CMTM1-214ENST00000530141 MIS18AQ9NYP9 233 aa10.27□□□□□ -0.77
CMTM1-214ENST00000530141 C10orf71Q711Q0 1435 aa10.26□□□□□ -0.77
CMTM1-214ENST00000530141 SBF1O95248 1867 aa10.26□□□□□ -0.77
CMTM1-214ENST00000530141 PHKG2P15735 406 aa10.26□□□□□ -0.77
CMTM1-214ENST00000530141 DPEP1P16444 411 aa10.26□□□□□ -0.77
CMTM1-214ENST00000530141 PDE4AP27815 886 aa10.26□□□□□ -0.77
CMTM1-214ENST00000530141 FAM161AQ3B820 660 aa10.26□□□□□ -0.77
CMTM1-214ENST00000530141 HDGFL1Q5TGJ6 251 aa10.26□□□□□ -0.77
CMTM1-214ENST00000530141 C16orf71Q8IYS4 520 aaPredicted RBP10.26□□□□□ -0.77
CMTM1-214ENST00000530141 RBM46Q8TBY0 533 aaKnown RBP10.26□□□□□ -0.77
CMTM1-214ENST00000530141 LGR6Q9HBX8 967 aa10.26□□□□□ -0.77
CMTM1-214ENST00000530141 PCDH11XQ9BZA7 1347 aa10.26□□□□□ -0.77
CMTM1-214ENST00000530141 PCDH11YQ9BZA8 1340 aa10.26□□□□□ -0.77
CMTM1-214ENST00000530141 ADAMTS7Q9UKP4 1686 aa10.25□□□□□ -0.77
CMTM1-214ENST00000530141 GNPATO15228 680 aa10.25□□□□□ -0.77
CMTM1-214ENST00000530141 ANP32AP39687 249 aaKnown RBP10.25□□□□□ -0.77
CMTM1-214ENST00000530141 FLIIQ13045 1269 aa10.25□□□□□ -0.77
CMTM1-214ENST00000530141 ITPK1Q13572 414 aa10.25□□□□□ -0.77
CMTM1-214ENST00000530141 KRT24Q2M2I5 525 aa10.25□□□□□ -0.77
CMTM1-214ENST00000530141 RPAP2Q8IXW5 612 aaPredicted RBP10.25□□□□□ -0.77
CMTM1-214ENST00000530141 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
CMTM1-214ENST00000530141 BACH2Q9BYV9 841 aa10.25□□□□□ -0.77
CMTM1-214ENST00000530141 SLC52A2Q9HAB3 445 aa10.25□□□□□ -0.77
CMTM1-214ENST00000530141 RRAGCQ9HB90 399 aa10.25□□□□□ -0.77
CMTM1-214ENST00000530141 HDAC5Q9UQL6 1122 aa10.25□□□□□ -0.77
CMTM1-214ENST00000530141 TIAM2Q8IVF5 1701 aa10.24□□□□□ -0.77
CMTM1-214ENST00000530141 KDM3BQ7LBC6 1761 aa10.24□□□□□ -0.77
CMTM1-214ENST00000530141 CYP27B1O15528 508 aa10.24□□□□□ -0.77
CMTM1-214ENST00000530141 EIF5BO60841 1220 aaKnown RBP10.24□□□□□ -0.77
CMTM1-214ENST00000530141 HMMRO75330 724 aa10.24□□□□□ -0.77
CMTM1-214ENST00000530141 GNAI3P08754 354 aa10.24□□□□□ -0.77
CMTM1-214ENST00000530141 FKBP5Q13451 457 aaPredicted RBP10.24□□□□□ -0.77
CMTM1-214ENST00000530141 DPY19L2Q6NUT2 758 aa10.24□□□□□ -0.77
CMTM1-214ENST00000530141 SMC5Q8IY18 1101 aa10.24□□□□□ -0.77
CMTM1-214ENST00000530141 FLAD1Q8NFF5 587 aa10.24□□□□□ -0.77
CMTM1-214ENST00000530141 PDZRN3Q9UPQ7 1066 aa10.24□□□□□ -0.77
CMTM1-214ENST00000530141 MRC1P22897 1456 aa10.23□□□□□ -0.77
CMTM1-214ENST00000530141 RGS3P49796 1198 aa10.23□□□□□ -0.77
CMTM1-214ENST00000530141 RASSF7Q02833 373 aa10.23□□□□□ -0.77
CMTM1-214ENST00000530141 TTC5Q8N0Z6 440 aa10.23□□□□□ -0.77
CMTM1-214ENST00000530141 PIGBQ92521 554 aa10.23□□□□□ -0.77
CMTM1-214ENST00000530141 RNF181Q9P0P0 153 aa10.23□□□□□ -0.77
CMTM1-214ENST00000530141 DBF4Q9UBU7 674 aaPredicted RBP10.23□□□□□ -0.77
CMTM1-214ENST00000530141 CCDC88AQ3V6T2 1871 aa10.23□□□□□ -0.77
CMTM1-214ENST00000530141 COL5A3P25940 1745 aaPredicted RBP10.22□□□□□ -0.77
CMTM1-214ENST00000530141 ERVV-2B6SEH9 535 aa10.22□□□□□ -0.77
CMTM1-214ENST00000530141 SLC34A2O95436 690 aa10.22□□□□□ -0.77
CMTM1-214ENST00000530141 DDX58O95786 925 aaKnown RBP10.22□□□□□ -0.77
CMTM1-214ENST00000530141 CACNA1FO60840 1977 aa10.22□□□□□ -0.77
CMTM1-214ENST00000530141 HEG1Q9ULI3 1381 aa10.22□□□□□ -0.77
CMTM1-214ENST00000530141 LOC102724428A0A0B4J2F2 783 aa10.21□□□□□ -0.77
CMTM1-214ENST00000530141 EIF2S2P20042 333 aaKnown RBP10.21□□□□□ -0.77
CMTM1-214ENST00000530141 SSFA2P28290 1259 aa10.21□□□□□ -0.77
CMTM1-214ENST00000530141 SIK1P57059 783 aa10.21□□□□□ -0.77
CMTM1-214ENST00000530141 CABP4P57796 275 aa10.21□□□□□ -0.77
CMTM1-214ENST00000530141 NKX1-1Q15270 411 aaPredicted RBP10.21□□□□□ -0.77
CMTM1-214ENST00000530141 SLC4A10Q6U841 1118 aa10.21□□□□□ -0.77
CMTM1-214ENST00000530141 ANKRD44Q8N8A2 993 aa10.21□□□□□ -0.77
CMTM1-214ENST00000530141 HYPKQ9NX55 129 aa10.21□□□□□ -0.77
CMTM1-214ENST00000530141 ASAP1Q9ULH1 1129 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms