RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 NPR1P16066 1061 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 KCNA3P22001 575 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 C3orf67Q6ZVT6 689 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 ZNF277Q9NRM2 450 aaPredicted RBP5.88□□□□□ -1.47
USP47-208ENST00000529813 E9PSI1 815 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 VAMP4O75379 141 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 SRGNP10124 158 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 PPP4R3CPQ6ZMV5 832 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 UBE3BQ7Z3V4 1068 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 SLC51AQ86UW1 340 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 C16orf71Q8IYS4 520 aaPredicted RBP5.88□□□□□ -1.47
USP47-208ENST00000529813 ZNF34Q8IZ26 560 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 RBM17Q96I25 401 aaKnown RBP5.88□□□□□ -1.47
USP47-208ENST00000529813 CWC25Q9NXE8 425 aaPredicted RBP5.88□□□□□ -1.47
USP47-208ENST00000529813 C9orf78Q9NZ63 289 aaPredicted RBP5.88□□□□□ -1.47
USP47-208ENST00000529813 PXDNLA1KZ92 1463 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 ABCC12Q96J65 1359 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 C6orf229H3BNL8 230 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 ALDH1B1P30837 517 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 KSR2Q6VAB6 950 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 TAOK3Q9H2K8 898 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 NSFL1CQ9UNZ2 370 aaKnown RBP5.88□□□□□ -1.47
USP47-208ENST00000529813 GJA3Q9Y6H8 435 aa5.88□□□□□ -1.47
USP47-208ENST00000529813 CASZ1Q86V15 1759 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 RIMBP2O15034 1052 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 NTSR2O95665 410 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 TAF7LQ5H9L4 462 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 DNAAF4Q8WXU2 420 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 FBXW7Q969H0 707 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 CLUAP1Q96AJ1 413 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 LRP5O75197 1615 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 UBR3Q6ZT12 1888 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 IL16Q14005 1332 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 TAF1LQ8IZX4 1826 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 PLIN1O60240 522 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 CCDC93Q567U6 631 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 LARGE2Q8N3Y3 721 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 C10orf71Q711Q0 1435 aa5.87□□□□□ -1.47
USP47-208ENST00000529813 TUBGCP6Q96RT7 1819 aa5.86□□□□□ -1.47
USP47-208ENST00000529813 PPEF1O14829 653 aaPredicted RBP5.86□□□□□ -1.47
USP47-208ENST00000529813 JDP2Q8WYK2 163 aa5.86□□□□□ -1.47
USP47-208ENST00000529813 METTL22Q9BUU2 404 aaPredicted RBP5.86□□□□□ -1.47
USP47-208ENST00000529813 ANKIB1Q9P2G1 1089 aa5.86□□□□□ -1.47
USP47-208ENST00000529813 TJP1Q07157 1748 aa5.86□□□□□ -1.47
USP47-208ENST00000529813 STYK1Q6J9G0 422 aa5.86□□□□□ -1.47
USP47-208ENST00000529813 LRP10Q7Z4F1 713 aa5.86□□□□□ -1.47
USP47-208ENST00000529813 SSH1Q8WYL5 1049 aa5.86□□□□□ -1.47
USP47-208ENST00000529813 GPR101Q96P66 508 aaPredicted RBP5.86□□□□□ -1.47
USP47-208ENST00000529813 NMRK2Q9NPI5 230 aa5.86□□□□□ -1.47
USP47-208ENST00000529813 SEC31BQ9NQW1 1179 aa5.86□□□□□ -1.47
USP47-208ENST00000529813 PPIP5K2O43314 1243 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 LMNB1P20700 586 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 SLFN5Q08AF3 891 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 DPY19L2Q6NUT2 758 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 DPP8Q6V1X1 898 aaPredicted RBP5.85□□□□□ -1.47
USP47-208ENST00000529813 RRAGCQ9HB90 399 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 CLEC11AQ9Y240 323 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 DLG5Q8TDM6 1919 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 NFKBIEO00221 500 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 EAPPQ56P03 285 aaPredicted RBP5.85□□□□□ -1.47
USP47-208ENST00000529813 CCDC191Q8NCU4 936 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 PDZRN3Q9UPQ7 1066 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 GTF3C3Q9Y5Q9 886 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 CCDC152Q4G0S7 254 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 MPNDQ8N594 471 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 ZBTB38Q8NAP3 1195 aaPredicted RBP5.85□□□□□ -1.47
USP47-208ENST00000529813 CELF1Q92879 486 aaKnown RBP5.85□□□□□ -1.47
USP47-208ENST00000529813 ISCA1Q9BUE6 129 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 SRCIN1Q9C0H9 1055 aa5.85□□□□□ -1.47
USP47-208ENST00000529813 ATP10DQ9P241 1426 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 NEURL1BA8MQ27 555 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 DDNO94850 711 aaPredicted RBP5.84□□□□□ -1.47
USP47-208ENST00000529813 IGKV5-2P06315 115 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 HSP90B1P14625 803 aaKnown RBP5.84□□□□□ -1.47
USP47-208ENST00000529813 KCNA4P22459 653 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 KCNJ4P48050 445 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 SOGA3Q5TF21 947 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 MPHOSPH8Q99549 860 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 ABCC4O15439 1325 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 PDE8AO60658 829 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 PRKCSHP14314 528 aaPredicted RBP5.84□□□□□ -1.47
USP47-208ENST00000529813 RPS8P62241 208 aaKnown RBP5.84□□□□□ -1.47
USP47-208ENST00000529813 AOC3Q16853 763 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 DOK7Q18PE1 504 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 ANKRD18AQ8IVF6 992 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 RTKN2Q8IZC4 609 aa5.84□□□□□ -1.47
USP47-208ENST00000529813 HELBQ8NG08 1087 aaPredicted RBP5.84□□□□□ -1.47
USP47-208ENST00000529813 NOB1Q9ULX3 412 aaKnown RBP5.84□□□□□ -1.47
USP47-208ENST00000529813 GCKRQ14397 625 aa5.83□□□□□ -1.48
USP47-208ENST00000529813 NIM1KQ8IY84 436 aa5.83□□□□□ -1.48
USP47-208ENST00000529813 LINS1Q8NG48 757 aa5.83□□□□□ -1.48
USP47-208ENST00000529813 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.83□□□□□ -1.48
USP47-208ENST00000529813 C4AP0C0L4 1744 aa5.83□□□□□ -1.48
USP47-208ENST00000529813 BCAR3O75815 825 aa5.83□□□□□ -1.48
USP47-208ENST00000529813 RAD17O75943 681 aa5.83□□□□□ -1.48
USP47-208ENST00000529813 UFL1O94874 794 aa5.83□□□□□ -1.48
USP47-208ENST00000529813 PCCAP05165 728 aaPredicted RBP5.83□□□□□ -1.48
USP47-208ENST00000529813 IGHMBP2P38935 993 aaKnown RBP5.83□□□□□ -1.48
USP47-208ENST00000529813 EIF6P56537 245 aaKnown RBP5.83□□□□□ -1.48
USP47-208ENST00000529813 GRAPQ13588 217 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms