RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 FAM8A1Q9UBU6 413 aa5.12□□□□□ -1.59
AMBRA1-208ENST00000529558 BCS1LQ9Y276 419 aa5.12□□□□□ -1.59
AMBRA1-208ENST00000529558 PARP3Q9Y6F1 533 aa5.12□□□□□ -1.59
AMBRA1-208ENST00000529558 POTEMA6NI47 508 aa5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 TNFRSF21O75509 655 aa5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 MICAL2O94851 1124 aa5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 RPIAP49247 311 aa5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 PLA2G2CQ5R387 149 aa5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 NBPF6Q5VWK0 638 aa5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 USPL1Q5W0Q7 1092 aa5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 PI16Q6UXB8 463 aa5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 PPARGC1BQ86YN6 1023 aaKnown RBP5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 KDF1Q8NAX2 398 aaPredicted RBP5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 NBPF4Q96M43 638 aa5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 PGPEP1Q9NXJ5 209 aa5.11□□□□□ -1.59
AMBRA1-208ENST00000529558 RNF223E7ERA6 249 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 CLSTN1O94985 981 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 ADH1AP07327 375 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 NR3C2P08235 984 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 IRS1P35568 1242 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 PTPROQ16827 1216 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 CKAP2LQ8IYA6 745 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 ANKLE1Q8NAG6 615 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 C7orf43Q8WVR3 580 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 MKL1Q969V6 931 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 MRFAP1L1Q96HT8 127 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 SEC16BQ96JE7 1060 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 NIFKQ9BYG3 293 aaKnown RBP5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 SRCIN1Q9C0H9 1055 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 ZFYVE28Q9HCC9 887 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 NEUROD4Q9HD90 331 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 COPRSQ9NQ92 184 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 FOXD3Q9UJU5 478 aaPredicted RBP5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 TLL2Q9Y6L7 1015 aa5.1□□□□□ -1.59
AMBRA1-208ENST00000529558 POTECB2RU33 542 aa5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 K7ELQ4 463 aaPredicted RBP5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 MARCH6O60337 910 aa5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 RAB11FIP3O75154 756 aa5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 CD2BP2O95400 341 aaKnown RBP5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 USP17L7P0C7H9 530 aa5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 XRCC5P13010 732 aaKnown RBP5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 SERINC3Q13530 473 aa5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 KCNB2Q92953 911 aa5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 DMGDHQ9UI17 866 aaKnown RBP5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 MRPL42Q9Y6G3 142 aaKnown RBP5.09□□□□□ -1.59
AMBRA1-208ENST00000529558 TXLNAP40222 546 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 PTGIRP43119 386 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 PTPN5P54829 565 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 IGBP1P78318 339 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 HIF1AQ16665 826 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 NXPE4Q6UWF7 544 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 SNX29Q8TEQ0 813 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 NLRP3Q96P20 1036 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 ZSCAN10Q96SZ4 725 aaPredicted RBP5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 RSRP1Q9BUV0 290 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 NOC4LQ9BVI4 516 aaKnown RBP5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 BCO2Q9BYV7 579 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 BRINP2Q9C0B6 783 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 KBTBD4Q9NVX7 518 aa5.08□□□□□ -1.6
AMBRA1-208ENST00000529558 hCG_2014768A0A024R1R8 64 aa5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 TGFBR3LH3BV60 316 aa5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 SSBP05455 408 aaKnown RBP eCLIP5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 IBSPP21815 317 aaPredicted RBP5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 PDE12Q6L8Q7 609 aaKnown RBP5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 MICAL1Q8TDZ2 1067 aa5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 RHBDD1Q8TEB9 315 aa5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 FAM163AQ96GL9 167 aaPredicted RBP5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 POLR3GLQ9BT43 218 aa5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 SPON2Q9BUD6 331 aa5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 FNDC3AQ9Y2H6 1198 aaKnown RBP5.07□□□□□ -1.6
AMBRA1-208ENST00000529558 MEN1O00255 615 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 ENPP3O14638 875 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 EIF5BO60841 1220 aaKnown RBP5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 PHACTR2O75167 634 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 NFX1Q12986 1120 aaKnown RBP5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 CBLBQ13191 982 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 IER5Q5VY09 327 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 TMEM214Q6NUQ4 689 aaKnown RBP5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 Q6ZVU0 165 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 NOL8Q76FK4 1167 aaKnown RBP5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 ZNF438Q7Z4V0 828 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 KIAA0825Q8IV33 1275 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 SUSD3Q96L08 255 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 ZNF408Q9H9D4 720 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 METTL14Q9HCE5 456 aaKnown RBP5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 NPHS2Q9NP85 383 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 SIRPGQ9P1W8 387 aa5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 NOP58Q9Y2X3 529 aaKnown RBP5.06□□□□□ -1.6
AMBRA1-208ENST00000529558 GTF2E1P29083 439 aaPredicted RBP5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 INPP5BP32019 993 aa5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 ETFBP38117 255 aa5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 GGCXP38435 758 aa5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 NASPP49321 788 aaPredicted RBP5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 IDH3AP50213 366 aa5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 PWP1Q13610 501 aa5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 RNF187Q5TA31 235 aaPredicted RBP5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 GALNT12Q8IXK2 581 aa5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 ZNF280CQ8ND82 737 aa5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 ZCRB1Q8TBF4 217 aaKnown RBP5.05□□□□□ -1.6
AMBRA1-208ENST00000529558 RHPN1Q8TCX5 695 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms