RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 COL25A1Q9BXS0 654 aaPredicted RBP8.63□□□□□ -1.03
CTR9-204ENST00000529355 TUT1Q9H6E5 874 aaKnown RBP8.63□□□□□ -1.03
CTR9-204ENST00000529355 C2CD2LO14523 706 aa8.62□□□□□ -1.03
CTR9-204ENST00000529355 EFSO43281 561 aa8.62□□□□□ -1.03
CTR9-204ENST00000529355 INPP5BP32019 993 aa8.62□□□□□ -1.03
CTR9-204ENST00000529355 FKBP4Q02790 459 aaKnown RBP eCLIP8.62□□□□□ -1.03
CTR9-204ENST00000529355 TRIM26Q12899 539 aaPredicted RBP8.62□□□□□ -1.03
CTR9-204ENST00000529355 LBRQ14739 615 aaKnown RBP8.62□□□□□ -1.03
CTR9-204ENST00000529355 CCER1Q8TC90 406 aaPredicted RBP8.62□□□□□ -1.03
CTR9-204ENST00000529355 KRTAP9-2Q9BYQ4 174 aa8.62□□□□□ -1.03
CTR9-204ENST00000529355 BRD7Q9NPI1 651 aa8.62□□□□□ -1.03
CTR9-204ENST00000529355 GPC6Q9Y625 555 aaPredicted RBP8.62□□□□□ -1.03
CTR9-204ENST00000529355 SOWAHDA6NJG2 315 aa8.61□□□□□ -1.03
CTR9-204ENST00000529355 EIF1AXP47813 144 aaKnown RBP8.61□□□□□ -1.03
CTR9-204ENST00000529355 SAMD5Q5TGI4 173 aa8.61□□□□□ -1.03
CTR9-204ENST00000529355 ANKIB1Q9P2G1 1089 aa8.61□□□□□ -1.03
CTR9-204ENST00000529355 FAM157BP0CG42 384 aa8.6□□□□□ -1.03
CTR9-204ENST00000529355 ZAP70P43403 619 aa8.6□□□□□ -1.03
CTR9-204ENST00000529355 ARHGAP4P98171 946 aa8.6□□□□□ -1.03
CTR9-204ENST00000529355 RAB44Q7Z6P3 723 aaPredicted RBP8.6□□□□□ -1.03
CTR9-204ENST00000529355 RGL4Q8IZJ4 473 aa8.6□□□□□ -1.03
CTR9-204ENST00000529355 GPR152Q8TDT2 470 aa8.6□□□□□ -1.03
CTR9-204ENST00000529355 GMCL1Q96IK5 515 aa8.6□□□□□ -1.03
CTR9-204ENST00000529355 CNTNAP3BQ96NU0 1288 aa8.6□□□□□ -1.03
CTR9-204ENST00000529355 SLC30A3Q99726 388 aa8.6□□□□□ -1.03
CTR9-204ENST00000529355 CNTNAP3Q9BZ76 1288 aa8.6□□□□□ -1.03
CTR9-204ENST00000529355 CCDC87Q9NVE4 849 aa8.6□□□□□ -1.03
CTR9-204ENST00000529355 NPR3P17342 541 aa8.59□□□□□ -1.03
CTR9-204ENST00000529355 FGFR3P22607 806 aa8.59□□□□□ -1.03
CTR9-204ENST00000529355 IER5Q5VY09 327 aa8.59□□□□□ -1.03
CTR9-204ENST00000529355 FIGNL1Q6PIW4 674 aa8.59□□□□□ -1.03
CTR9-204ENST00000529355 EGFL7Q9UHF1 273 aa8.59□□□□□ -1.03
CTR9-204ENST00000529355 ADAMTS8Q9UP79 889 aa8.59□□□□□ -1.03
CTR9-204ENST00000529355 MTMR7Q9Y216 660 aa8.59□□□□□ -1.03
CTR9-204ENST00000529355 A6NHS1 94 aa8.58□□□□□ -1.04
CTR9-204ENST00000529355 FZD6O60353 706 aa8.58□□□□□ -1.04
CTR9-204ENST00000529355 NOM1Q5C9Z4 860 aaKnown RBP8.58□□□□□ -1.04
CTR9-204ENST00000529355 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
CTR9-204ENST00000529355 TRERF1Q96PN7 1200 aa8.58□□□□□ -1.04
CTR9-204ENST00000529355 CFHR5Q9BXR6 569 aa8.58□□□□□ -1.04
CTR9-204ENST00000529355 GZF1Q9H116 711 aaPredicted RBP8.58□□□□□ -1.04
CTR9-204ENST00000529355 ATXN7L1Q9ULK2 861 aaPredicted RBP8.58□□□□□ -1.04
CTR9-204ENST00000529355 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
CTR9-204ENST00000529355 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
CTR9-204ENST00000529355 SF3B2Q13435 895 aaKnown RBP8.57□□□□□ -1.04
CTR9-204ENST00000529355 TRIP4Q15650 581 aaPredicted RBP8.57□□□□□ -1.04
CTR9-204ENST00000529355 CMTR1Q8N1G2 835 aaKnown RBP8.57□□□□□ -1.04
CTR9-204ENST00000529355 EDEM1Q92611 657 aa8.57□□□□□ -1.04
CTR9-204ENST00000529355 KCNMB2Q9Y691 235 aa8.57□□□□□ -1.04
CTR9-204ENST00000529355 ADAM23O75077 832 aa8.56□□□□□ -1.04
CTR9-204ENST00000529355 ARSDP51689 593 aa8.56□□□□□ -1.04
CTR9-204ENST00000529355 DNM1Q05193 864 aaKnown RBP8.56□□□□□ -1.04
CTR9-204ENST00000529355 HIF1AQ16665 826 aa8.56□□□□□ -1.04
CTR9-204ENST00000529355 FOXR1Q6PIV2 292 aa8.56□□□□□ -1.04
CTR9-204ENST00000529355 GGNBP2Q9H3C7 697 aa8.56□□□□□ -1.04
CTR9-204ENST00000529355 MARK1Q9P0L2 795 aa8.56□□□□□ -1.04
CTR9-204ENST00000529355 KLF15Q9UIH9 416 aa8.56□□□□□ -1.04
CTR9-204ENST00000529355 POLIQ9UNA4 740 aa8.56□□□□□ -1.04
CTR9-204ENST00000529355 KCNH4Q9UQ05 1017 aa8.56□□□□□ -1.04
CTR9-204ENST00000529355 FAM13AO94988 1023 aa8.55□□□□□ -1.04
CTR9-204ENST00000529355 MX2P20592 715 aa8.55□□□□□ -1.04
CTR9-204ENST00000529355 KANK3Q6NY19 840 aa8.55□□□□□ -1.04
CTR9-204ENST00000529355 KRT25Q7Z3Z0 450 aa8.55□□□□□ -1.04
CTR9-204ENST00000529355 ABTB2Q8N961 1025 aa8.55□□□□□ -1.04
CTR9-204ENST00000529355 NUDT16Q96DE0 195 aaKnown RBP8.55□□□□□ -1.04
CTR9-204ENST00000529355 BIN2Q9UBW5 565 aaPredicted RBP8.55□□□□□ -1.04
CTR9-204ENST00000529355 PDGFAP04085 211 aa8.54□□□□□ -1.04
CTR9-204ENST00000529355 KCNQ4P56696 695 aa8.54□□□□□ -1.04
CTR9-204ENST00000529355 AAMPQ13685 434 aa8.54□□□□□ -1.04
CTR9-204ENST00000529355 KRTAP1-3Q8IUG1 177 aa8.54□□□□□ -1.04
CTR9-204ENST00000529355 GSX2Q9BZM3 304 aa8.54□□□□□ -1.04
CTR9-204ENST00000529355 IGF1RP08069 1367 aa8.53□□□□□ -1.04
CTR9-204ENST00000529355 SASH3O75995 380 aa8.53□□□□□ -1.04
CTR9-204ENST00000529355 TARSP26639 723 aaKnown RBP8.53□□□□□ -1.04
CTR9-204ENST00000529355 SPEM2Q0P670 501 aa8.53□□□□□ -1.04
CTR9-204ENST00000529355 WHAMMQ8TF30 809 aa8.53□□□□□ -1.04
CTR9-204ENST00000529355 ZFATQ9P243 1243 aa8.53□□□□□ -1.04
CTR9-204ENST00000529355 PHF24Q9UPV7 400 aa8.53□□□□□ -1.04
CTR9-204ENST00000529355 BMP4P12644 408 aa8.52□□□□□ -1.05
CTR9-204ENST00000529355 PCBP4P57723 403 aaKnown RBP8.52□□□□□ -1.05
CTR9-204ENST00000529355 C1orf229Q6ZS94 237 aaPredicted RBP8.52□□□□□ -1.05
CTR9-204ENST00000529355 MBIPQ9NS73 344 aa8.52□□□□□ -1.05
CTR9-204ENST00000529355 XYLBO75191 536 aa8.51□□□□□ -1.05
CTR9-204ENST00000529355 ADAMTS2O95450 1211 aa8.51□□□□□ -1.05
CTR9-204ENST00000529355 IRS1P35568 1242 aa8.51□□□□□ -1.05
CTR9-204ENST00000529355 LAMC2Q13753 1193 aa8.51□□□□□ -1.05
CTR9-204ENST00000529355 BHMTQ93088 406 aa8.51□□□□□ -1.05
CTR9-204ENST00000529355 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.51□□□□□ -1.05
CTR9-204ENST00000529355 MZF1P28698 734 aaPredicted RBP8.5□□□□□ -1.05
CTR9-204ENST00000529355 FAM182BQ5T319 152 aa8.5□□□□□ -1.05
CTR9-204ENST00000529355 PIK3R5Q8WYR1 880 aa8.5□□□□□ -1.05
CTR9-204ENST00000529355 ACDQ96AP0 544 aa8.5□□□□□ -1.05
CTR9-204ENST00000529355 UBAP1LF5GYI3 381 aa8.49□□□□□ -1.05
CTR9-204ENST00000529355 NFKB1P19838 968 aa8.49□□□□□ -1.05
CTR9-204ENST00000529355 CCINQ13939 588 aa8.49□□□□□ -1.05
CTR9-204ENST00000529355 C8orf34Q49A92 452 aa8.49□□□□□ -1.05
CTR9-204ENST00000529355 SYT9Q86SS6 491 aa8.49□□□□□ -1.05
CTR9-204ENST00000529355 ALKBH2Q6NS38 261 aa8.48□□□□□ -1.05
CTR9-204ENST00000529355 LYPD4Q6UWN0 246 aa8.48□□□□□ -1.05
CTR9-204ENST00000529355 SND1Q7KZF4 910 aaKnown RBP eCLIP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms