RNA–Protein interactions for RNA: ENST00000529273.1

ROM1-204, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 4

Gene ROM1, Length 249 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-204ENST00000529273 RPGRQ92834 1020 aaKnown RBP35.99■■■■□ 3.35
ROM1-204ENST00000529273 UTP14AQ9BVJ6 771 aaKnown RBP35.99■■■■□ 3.35
ROM1-204ENST00000529273 CCDC88AQ3V6T2 1871 aa35.99■■■■□ 3.35
ROM1-204ENST00000529273 TIAM2Q8IVF5 1701 aa35.98■■■■□ 3.35
ROM1-204ENST00000529273 CALD1Q05682 793 aaKnown RBP35.98■■■■□ 3.35
ROM1-204ENST00000529273 HSP90AB3PQ58FF7 597 aa35.98■■■■□ 3.35
ROM1-204ENST00000529273 RTKN2Q8IZC4 609 aa35.98■■■■□ 3.35
ROM1-204ENST00000529273 HOXA10P31260 410 aaPredicted RBP35.97■■■■□ 3.35
ROM1-204ENST00000529273 FKBP4Q02790 459 aaKnown RBP eCLIP35.97■■■■□ 3.35
ROM1-204ENST00000529273 IFT57Q9NWB7 429 aa35.97■■■■□ 3.35
ROM1-204ENST00000529273 FSTL1Q12841 308 aa35.96■■■■□ 3.35
ROM1-204ENST00000529273 DBF4Q9UBU7 674 aaPredicted RBP35.96■■■■□ 3.35
ROM1-204ENST00000529273 APLP1P51693 650 aa35.95■■■■□ 3.35
ROM1-204ENST00000529273 GNAI1P63096 354 aa35.95■■■■□ 3.35
ROM1-204ENST00000529273 TCIRG1Q13488 830 aa35.95■■■■□ 3.35
ROM1-204ENST00000529273 C3orf67Q6ZVT6 689 aa35.95■■■■□ 3.35
ROM1-204ENST00000529273 SLC10A5Q5PT55 438 aa35.94■■■■□ 3.34
ROM1-204ENST00000529273 NLRP10Q86W26 655 aa35.93■■■■□ 3.34
ROM1-204ENST00000529273 RBM17Q96I25 401 aaKnown RBP35.93■■■■□ 3.34
ROM1-204ENST00000529273 NLRP3Q96P20 1036 aa35.93■■■■□ 3.34
ROM1-204ENST00000529273 ZNF277Q9NRM2 450 aaPredicted RBP35.93■■■■□ 3.34
ROM1-204ENST00000529273 CRAMP1Q96RY5 1269 aa35.92■■■■□ 3.34
ROM1-204ENST00000529273 CEP350Q5VT06 3117 aa35.92■■■■□ 3.34
ROM1-204ENST00000529273 POTECB2RU33 542 aa35.91■■■■□ 3.34
ROM1-204ENST00000529273 RNF123Q5XPI4 1314 aa35.9■■■■□ 3.34
ROM1-204ENST00000529273 PLBD2Q8NHP8 589 aa35.9■■■■□ 3.34
ROM1-204ENST00000529273 HYPKQ9NX55 129 aa35.9■■■■□ 3.34
ROM1-204ENST00000529273 DICER1Q9UPY3 1922 aaKnown RBP35.89■■■■□ 3.34
ROM1-204ENST00000529273 CC2D2BQ6DHV5 1058 aa35.89■■■■□ 3.34
ROM1-204ENST00000529273 ANKRD13DQ6ZTN6 518 aa35.89■■■■□ 3.34
ROM1-204ENST00000529273 SYNE4Q8N205 404 aa35.89■■■■□ 3.34
ROM1-204ENST00000529273 SMC1BQ8NDV3 1235 aa35.89■■■■□ 3.34
ROM1-204ENST00000529273 DDNO94850 711 aaPredicted RBP35.88■■■■□ 3.33
ROM1-204ENST00000529273 TRMT112Q9UI30 125 aaKnown RBP35.88■■■■□ 3.33
ROM1-204ENST00000529273 ELL2O00472 640 aaPredicted RBP35.87■■■■□ 3.33
ROM1-204ENST00000529273 ANP32CO43423 234 aa35.87■■■■□ 3.33
ROM1-204ENST00000529273 PSMD1Q99460 953 aa35.86■■■■□ 3.33
ROM1-204ENST00000529273 SNED1Q8TER0 1413 aa35.85■■■■□ 3.33
ROM1-204ENST00000529273 PPEF1O14829 653 aaPredicted RBP35.85■■■■□ 3.33
ROM1-204ENST00000529273 HCLS1P14317 486 aaPredicted RBP35.85■■■■□ 3.33
ROM1-204ENST00000529273 IARSP41252 1262 aaKnown RBP35.85■■■■□ 3.33
ROM1-204ENST00000529273 WDR90Q96KV7 1748 aa35.85■■■■□ 3.33
ROM1-204ENST00000529273 C8orf58Q8NAV2 365 aa35.84■■■■□ 3.33
ROM1-204ENST00000529273 MRS2Q9HD23 443 aa35.84■■■■□ 3.33
ROM1-204ENST00000529273 SH3TC1Q8TE82 1336 aa35.83■■■■□ 3.33
ROM1-204ENST00000529273 TCERG1O14776 1098 aaKnown RBP35.83■■■■□ 3.33
ROM1-204ENST00000529273 ZNF428Q96B54 188 aa35.83■■■■□ 3.33
ROM1-204ENST00000529273 GRIPAP1Q4V328 841 aa35.82■■■■□ 3.32
ROM1-204ENST00000529273 SLC51AQ86UW1 340 aa35.81■■■■□ 3.32
ROM1-204ENST00000529273 ISCA1Q9BUE6 129 aa35.81■■■■□ 3.32
ROM1-204ENST00000529273 ANKRD36CQ5JPF3 1778 aa35.8■■■■□ 3.32
ROM1-204ENST00000529273 ATP5J2-PTCD1G3V325 749 aa35.8■■■■□ 3.32
ROM1-204ENST00000529273 CCDC27Q2M243 656 aa35.79■■■■□ 3.32
ROM1-204ENST00000529273 ABCC4O15439 1325 aa35.79■■■■□ 3.32
ROM1-204ENST00000529273 ZNF541Q9H0D2 1346 aa35.79■■■■□ 3.32
ROM1-204ENST00000529273 DNAJC5GQ8N7S2 189 aa35.78■■■■□ 3.32
ROM1-204ENST00000529273 PHAXQ9H814 394 aaKnown RBP35.78■■■■□ 3.32
ROM1-204ENST00000529273 WWC1Q8IX03 1113 aa35.77■■■■□ 3.32
ROM1-204ENST00000529273 L3MBTL3Q96JM7 780 aaPredicted RBP35.77■■■■□ 3.32
ROM1-204ENST00000529273 ATP6V0A2Q9Y487 856 aa35.77■■■■□ 3.32
ROM1-204ENST00000529273 FZD9O00144 591 aa35.76■■■■□ 3.32
ROM1-204ENST00000529273 HTRA3P83110 453 aa35.76■■■■□ 3.32
ROM1-204ENST00000529273 RIC3Q7Z5B4 369 aa35.76■■■■□ 3.32
ROM1-204ENST00000529273 JDP2Q8WYK2 163 aa35.76■■■■□ 3.32
ROM1-204ENST00000529273 TMX4Q9H1E5 349 aaPredicted RBP35.76■■■■□ 3.32
ROM1-204ENST00000529273 GOLGA2Q08379 1002 aa35.75■■■■□ 3.31
ROM1-204ENST00000529273 TSPYL6Q8N831 410 aa35.75■■■■□ 3.31
ROM1-204ENST00000529273 TSR2Q969E8 191 aaKnown RBP35.75■■■■□ 3.31
ROM1-204ENST00000529273 IQCA1LA6NCM1 817 aa35.74■■■■□ 3.31
ROM1-204ENST00000529273 BBOX1O75936 387 aa35.74■■■■□ 3.31
ROM1-204ENST00000529273 TRIM28Q13263 835 aaKnown RBP35.74■■■■□ 3.31
ROM1-204ENST00000529273 FAM89AQ96GI7 184 aa35.74■■■■□ 3.31
ROM1-204ENST00000529273 CHMP4AQ9BY43 222 aa35.74■■■■□ 3.31
ROM1-204ENST00000529273 CCDC30Q5VVM6 783 aa35.73■■■■□ 3.31
ROM1-204ENST00000529273 DDX46Q7L014 1031 aaKnown RBP35.73■■■■□ 3.31
ROM1-204ENST00000529273 LARGE2Q8N3Y3 721 aa35.71■■■■□ 3.31
ROM1-204ENST00000529273 NCBP3Q53F19 620 aaKnown RBP35.7■■■■□ 3.31
ROM1-204ENST00000529273 TAF1DQ9H5J8 278 aaPredicted RBP35.7■■■■□ 3.31
ROM1-204ENST00000529273 POTEIP0CG38 1075 aa35.69■■■■□ 3.3
ROM1-204ENST00000529273 POTEJP0CG39 1038 aa35.69■■■■□ 3.3
ROM1-204ENST00000529273 GRAPQ13588 217 aa35.69■■■■□ 3.3
ROM1-204ENST00000529273 SP8Q8IXZ3 490 aa35.69■■■■□ 3.3
ROM1-204ENST00000529273 GRAPLQ8TC17 118 aaPredicted RBP35.69■■■■□ 3.3
ROM1-204ENST00000529273 RTL5Q5HYW3 569 aaPredicted RBP35.68■■■■□ 3.3
ROM1-204ENST00000529273 CHADLQ6NUI6 762 aa35.68■■■■□ 3.3
ROM1-204ENST00000529273 IL16Q14005 1332 aa35.67■■■■□ 3.3
ROM1-204ENST00000529273 EIF6P56537 245 aaKnown RBP35.67■■■■□ 3.3
ROM1-204ENST00000529273 GPC2Q8N158 579 aa35.67■■■■□ 3.3
ROM1-204ENST00000529273 MYD88Q99836 296 aa35.67■■■■□ 3.3
ROM1-204ENST00000529273 COL4A5P29400 1685 aa35.67■■■■□ 3.3
ROM1-204ENST00000529273 SF3B3Q15393 1217 aaKnown RBP35.66■■■■□ 3.3
ROM1-204ENST00000529273 HACL1Q9UJ83 578 aa35.66■■■■□ 3.3
ROM1-204ENST00000529273 PPIP5K2O43314 1243 aa35.65■■■■□ 3.3
ROM1-204ENST00000529273 DDX58O95786 925 aaKnown RBP35.65■■■■□ 3.3
ROM1-204ENST00000529273 LAMB2P55268 1798 aa35.65■■■■□ 3.3
ROM1-204ENST00000529273 IRS4O14654 1257 aaPredicted RBP35.64■■■■□ 3.3
ROM1-204ENST00000529273 DPP8Q6V1X1 898 aaPredicted RBP35.64■■■■□ 3.3
ROM1-204ENST00000529273 SUPT20HQ8NEM7 779 aa35.64■■■■□ 3.3
ROM1-204ENST00000529273 RTFDC1Q9BY42 306 aaPredicted RBP35.64■■■■□ 3.3
ROM1-204ENST00000529273 VPS33BQ9H267 617 aa35.64■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms