RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 TNNQ9UQP3 1299 aa17.6■□□□□ 0.41
BEST1-206ENST00000529265 COL24A1Q17RW2 1714 aa17.6■□□□□ 0.41
BEST1-206ENST00000529265 NEURL1BA8MQ27 555 aa17.59■□□□□ 0.41
BEST1-206ENST00000529265 CCT4P50991 539 aaKnown RBP17.59■□□□□ 0.41
BEST1-206ENST00000529265 TRIM28Q13263 835 aaKnown RBP17.59■□□□□ 0.41
BEST1-206ENST00000529265 TRMT112Q9UI30 125 aaKnown RBP17.59■□□□□ 0.41
BEST1-206ENST00000529265 PXDNLA1KZ92 1463 aa17.59■□□□□ 0.41
BEST1-206ENST00000529265 ALDH1L1O75891 902 aa17.58■□□□□ 0.41
BEST1-206ENST00000529265 RRP1P56182 461 aaKnown RBP17.58■□□□□ 0.41
BEST1-206ENST00000529265 CNBD1Q8NA66 436 aa17.58■□□□□ 0.41
BEST1-206ENST00000529265 SUPT16HQ9Y5B9 1047 aaKnown RBP17.58■□□□□ 0.41
BEST1-206ENST00000529265 ABCC4O15439 1325 aa17.58■□□□□ 0.4
BEST1-206ENST00000529265 ST5P78524 1137 aa17.57■□□□□ 0.4
BEST1-206ENST00000529265 RTL5Q5HYW3 569 aaPredicted RBP17.57■□□□□ 0.4
BEST1-206ENST00000529265 N4BP2Q86UW6 1770 aaPredicted RBP17.56■□□□□ 0.4
BEST1-206ENST00000529265 PTGER2P43116 358 aa17.56■□□□□ 0.4
BEST1-206ENST00000529265 GCKRQ14397 625 aa17.56■□□□□ 0.4
BEST1-206ENST00000529265 NUTM1Q86Y26 1132 aa17.56■□□□□ 0.4
BEST1-206ENST00000529265 PANK1Q8TE04 598 aa17.56■□□□□ 0.4
BEST1-206ENST00000529265 C9orf78Q9NZ63 289 aaPredicted RBP17.56■□□□□ 0.4
BEST1-206ENST00000529265 PPP1R1BQ9UD71 204 aaPredicted RBP17.56■□□□□ 0.4
BEST1-206ENST00000529265 SH3TC1Q8TE82 1336 aa17.56■□□□□ 0.4
BEST1-206ENST00000529265 NTSR2O95665 410 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 INTS3Q68E01 1043 aaKnown RBP17.55■□□□□ 0.4
BEST1-206ENST00000529265 PRR5LQ6MZQ0 368 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 ITPRIPQ8IWB1 547 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 KLHL34Q8N239 644 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 SGIP1Q9BQI5 828 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 RLBP1P12271 317 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 ERFEQ4G0M1 354 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 ZBTB38Q8NAP3 1195 aaPredicted RBP17.55■□□□□ 0.4
BEST1-206ENST00000529265 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
BEST1-206ENST00000529265 NRXN2Q9P2S2 1712 aa17.55■□□□□ 0.4
BEST1-206ENST00000529265 IBTKQ9P2D0 1353 aaPredicted RBP17.54■□□□□ 0.4
BEST1-206ENST00000529265 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
BEST1-206ENST00000529265 PCCAP05165 728 aaPredicted RBP17.54■□□□□ 0.4
BEST1-206ENST00000529265 PDE3AQ14432 1141 aa17.54■□□□□ 0.4
BEST1-206ENST00000529265 UBE3BQ7Z3V4 1068 aa17.54■□□□□ 0.4
BEST1-206ENST00000529265 GRM8O00222 908 aa17.53■□□□□ 0.4
BEST1-206ENST00000529265 H7C1W4 665 aa17.52■□□□□ 0.4
BEST1-206ENST00000529265 IRS4O14654 1257 aaPredicted RBP17.52■□□□□ 0.4
BEST1-206ENST00000529265 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
BEST1-206ENST00000529265 C20orf194Q5TEA3 1177 aa17.52■□□□□ 0.4
BEST1-206ENST00000529265 SYNE4Q8N205 404 aa17.52■□□□□ 0.4
BEST1-206ENST00000529265 COG6Q9Y2V7 657 aa17.52■□□□□ 0.4
BEST1-206ENST00000529265 HCLS1P14317 486 aaPredicted RBP17.51■□□□□ 0.39
BEST1-206ENST00000529265 MYH3P11055 1940 aa17.51■□□□□ 0.39
BEST1-206ENST00000529265 MVPQ14764 893 aaKnown RBP17.5■□□□□ 0.39
BEST1-206ENST00000529265 BRIP1Q9BX63 1249 aa17.5■□□□□ 0.39
BEST1-206ENST00000529265 USP44Q9H0E7 712 aa17.5■□□□□ 0.39
BEST1-206ENST00000529265 ABCC12Q96J65 1359 aa17.5■□□□□ 0.39
BEST1-206ENST00000529265 NBPF7P0C2Y1 421 aaPredicted RBP17.49■□□□□ 0.39
BEST1-206ENST00000529265 UBTFL1P0CB47 393 aaPredicted RBP17.49■□□□□ 0.39
BEST1-206ENST00000529265 PDE6BP35913 854 aa17.49■□□□□ 0.39
BEST1-206ENST00000529265 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
BEST1-206ENST00000529265 ANKRD31Q8N7Z5 1873 aa17.49■□□□□ 0.39
BEST1-206ENST00000529265 NLRP3Q96P20 1036 aa17.49■□□□□ 0.39
BEST1-206ENST00000529265 CDHR2Q9BYE9 1310 aa17.49■□□□□ 0.39
BEST1-206ENST00000529265 GNAI3P08754 354 aa17.48■□□□□ 0.39
BEST1-206ENST00000529265 SLC10A5Q5PT55 438 aa17.48■□□□□ 0.39
BEST1-206ENST00000529265 MEIS3Q99687 375 aa17.48■□□□□ 0.39
BEST1-206ENST00000529265 DDX19BQ9UMR2 479 aa17.48■□□□□ 0.39
BEST1-206ENST00000529265 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
BEST1-206ENST00000529265 LAMB2P55268 1798 aa17.48■□□□□ 0.39
BEST1-206ENST00000529265 KIF13BQ9NQT8 1826 aa17.48■□□□□ 0.39
BEST1-206ENST00000529265 C10orf71Q711Q0 1435 aa17.48■□□□□ 0.39
BEST1-206ENST00000529265 PDE8AO60658 829 aa17.47■□□□□ 0.39
BEST1-206ENST00000529265 CHMP4BQ9H444 224 aaKnown RBP17.47■□□□□ 0.39
BEST1-206ENST00000529265 CD2APQ9Y5K6 639 aa17.47■□□□□ 0.39
BEST1-206ENST00000529265 UTYO14607 1347 aa17.47■□□□□ 0.39
BEST1-206ENST00000529265 LRP5O75197 1615 aa17.47■□□□□ 0.39
BEST1-206ENST00000529265 CASP7P55210 303 aa17.47■□□□□ 0.39
BEST1-206ENST00000529265 H0YIN7 160 aa17.46■□□□□ 0.39
BEST1-206ENST00000529265 C2CD5Q86YS7 1000 aa17.46■□□□□ 0.39
BEST1-206ENST00000529265 SUCLG2Q96I99 432 aa17.46■□□□□ 0.39
BEST1-206ENST00000529265 FHDC1Q9C0D6 1143 aaPredicted RBP17.46■□□□□ 0.39
BEST1-206ENST00000529265 TNRC6CQ9HCJ0 1690 aaKnown RBP17.46■□□□□ 0.38
BEST1-206ENST00000529265 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
BEST1-206ENST00000529265 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
BEST1-206ENST00000529265 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
BEST1-206ENST00000529265 PDZRN3Q9UPQ7 1066 aa17.45■□□□□ 0.38
BEST1-206ENST00000529265 CHMP3Q9Y3E7 222 aa17.45■□□□□ 0.38
BEST1-206ENST00000529265 RIC1Q4ADV7 1423 aa17.44■□□□□ 0.38
BEST1-206ENST00000529265 GNAI2P04899 355 aa17.44■□□□□ 0.38
BEST1-206ENST00000529265 CTSWP56202 376 aa17.44■□□□□ 0.38
BEST1-206ENST00000529265 TGFB2P61812 414 aa17.44■□□□□ 0.38
BEST1-206ENST00000529265 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
BEST1-206ENST00000529265 C3orf67Q6ZVT6 689 aa17.44■□□□□ 0.38
BEST1-206ENST00000529265 ZNF622Q969S3 477 aaKnown RBP eCLIP17.44■□□□□ 0.38
BEST1-206ENST00000529265 CRBNQ96SW2 442 aa17.44■□□□□ 0.38
BEST1-206ENST00000529265 PLA2G12BQ9BX93 195 aa17.44■□□□□ 0.38
BEST1-206ENST00000529265 LRRFIP2Q9Y608 721 aaKnown RBP17.44■□□□□ 0.38
BEST1-206ENST00000529265 CHRNA5P30532 468 aa17.43■□□□□ 0.38
BEST1-206ENST00000529265 CCDC152Q4G0S7 254 aa17.43■□□□□ 0.38
BEST1-206ENST00000529265 CACNA1SQ13698 1873 aa17.43■□□□□ 0.38
BEST1-206ENST00000529265 A0A0G2JLW4 131 aa17.42■□□□□ 0.38
BEST1-206ENST00000529265 DPEP1P16444 411 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms