RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 DBF4Q9UBU7 674 aaPredicted RBP17.53■□□□□ 0.4
SNRNP35-205ENST00000529201 TIAM2Q8IVF5 1701 aa17.52■□□□□ 0.4
SNRNP35-205ENST00000529201 UBN2Q6ZU65 1347 aa17.52■□□□□ 0.4
SNRNP35-205ENST00000529201 HSPA6P17066 643 aa17.52■□□□□ 0.4
SNRNP35-205ENST00000529201 CCDC93Q567U6 631 aa17.52■□□□□ 0.4
SNRNP35-205ENST00000529201 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.4
SNRNP35-205ENST00000529201 SUSD4Q5VX71 490 aa17.52■□□□□ 0.4
SNRNP35-205ENST00000529201 DPY19L2Q6NUT2 758 aa17.52■□□□□ 0.4
SNRNP35-205ENST00000529201 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
SNRNP35-205ENST00000529201 COPS6Q7L5N1 327 aa17.52■□□□□ 0.4
SNRNP35-205ENST00000529201 RTKN2Q8IZC4 609 aa17.52■□□□□ 0.4
SNRNP35-205ENST00000529201 ANP32CO43423 234 aa17.51■□□□□ 0.39
SNRNP35-205ENST00000529201 NTSR2O95665 410 aa17.51■□□□□ 0.39
SNRNP35-205ENST00000529201 GPTP24298 496 aa17.51■□□□□ 0.39
SNRNP35-205ENST00000529201 PRELPP51888 382 aa17.51■□□□□ 0.39
SNRNP35-205ENST00000529201 PROSER3Q2NL68 480 aa17.51■□□□□ 0.39
SNRNP35-205ENST00000529201 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
SNRNP35-205ENST00000529201 GRIPAP1Q4V328 841 aa17.51■□□□□ 0.39
SNRNP35-205ENST00000529201 RBM46Q8TBY0 533 aaKnown RBP17.51■□□□□ 0.39
SNRNP35-205ENST00000529201 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
SNRNP35-205ENST00000529201 HOXA10P31260 410 aaPredicted RBP17.5■□□□□ 0.39
SNRNP35-205ENST00000529201 CC2D2BQ6DHV5 1058 aa17.5■□□□□ 0.39
SNRNP35-205ENST00000529201 NUTM1Q86Y26 1132 aa17.5■□□□□ 0.39
SNRNP35-205ENST00000529201 XAGE3Q8WTP9 111 aa17.5■□□□□ 0.39
SNRNP35-205ENST00000529201 NECTIN2Q92692 538 aa17.5■□□□□ 0.39
SNRNP35-205ENST00000529201 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
SNRNP35-205ENST00000529201 MBIPQ9NS73 344 aa17.5■□□□□ 0.39
SNRNP35-205ENST00000529201 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
SNRNP35-205ENST00000529201 ANXA1P04083 346 aa17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 AIMP1Q12904 312 aaKnown RBP17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 TCIRG1Q13488 830 aa17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 KRT24Q2M2I5 525 aa17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 SLC10A5Q5PT55 438 aa17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 RPGRQ92834 1020 aaKnown RBP17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 RBM17Q96I25 401 aaKnown RBP17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 RRAGCQ9HB90 399 aa17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 CHPF2Q9P2E5 772 aa17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 ABCC12Q96J65 1359 aa17.49■□□□□ 0.39
SNRNP35-205ENST00000529201 VEGFAP15692 232 aaPredicted RBP17.48■□□□□ 0.39
SNRNP35-205ENST00000529201 FKBP4Q02790 459 aaKnown RBP eCLIP17.48■□□□□ 0.39
SNRNP35-205ENST00000529201 FSTL1Q12841 308 aa17.48■□□□□ 0.39
SNRNP35-205ENST00000529201 CCDC27Q2M243 656 aa17.48■□□□□ 0.39
SNRNP35-205ENST00000529201 PLBD2Q8NHP8 589 aa17.48■□□□□ 0.39
SNRNP35-205ENST00000529201 NLRP3Q96P20 1036 aa17.48■□□□□ 0.39
SNRNP35-205ENST00000529201 CRAMP1Q96RY5 1269 aa17.48■□□□□ 0.39
SNRNP35-205ENST00000529201 ANKRD13DQ6ZTN6 518 aa17.47■□□□□ 0.39
SNRNP35-205ENST00000529201 NLRP10Q86W26 655 aa17.46■□□□□ 0.39
SNRNP35-205ENST00000529201 WDR90Q96KV7 1748 aa17.46■□□□□ 0.39
SNRNP35-205ENST00000529201 APLP1P51693 650 aa17.45■□□□□ 0.38
SNRNP35-205ENST00000529201 CCDC184Q52MB2 194 aa17.45■□□□□ 0.38
SNRNP35-205ENST00000529201 PSMD1Q99460 953 aa17.45■□□□□ 0.38
SNRNP35-205ENST00000529201 MRS2Q9HD23 443 aa17.45■□□□□ 0.38
SNRNP35-205ENST00000529201 TMX4Q9H1E5 349 aaPredicted RBP17.44■□□□□ 0.38
SNRNP35-205ENST00000529201 TRMT112Q9UI30 125 aaKnown RBP17.44■□□□□ 0.38
SNRNP35-205ENST00000529201 SMC1BQ8NDV3 1235 aa17.43■□□□□ 0.38
SNRNP35-205ENST00000529201 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
SNRNP35-205ENST00000529201 TRIM28Q13263 835 aaKnown RBP17.42■□□□□ 0.38
SNRNP35-205ENST00000529201 IL16Q14005 1332 aa17.42■□□□□ 0.38
SNRNP35-205ENST00000529201 SNED1Q8TER0 1413 aa17.41■□□□□ 0.38
SNRNP35-205ENST00000529201 PPEF1O14829 653 aaPredicted RBP17.41■□□□□ 0.38
SNRNP35-205ENST00000529201 BBOX1O75936 387 aa17.41■□□□□ 0.38
SNRNP35-205ENST00000529201 IARSP41252 1262 aaKnown RBP17.41■□□□□ 0.38
SNRNP35-205ENST00000529201 GOLGA2Q08379 1002 aa17.41■□□□□ 0.38
SNRNP35-205ENST00000529201 CCDC30Q5VVM6 783 aa17.41■□□□□ 0.38
SNRNP35-205ENST00000529201 WWC1Q8IX03 1113 aa17.41■□□□□ 0.38
SNRNP35-205ENST00000529201 SYNE4Q8N205 404 aa17.41■□□□□ 0.38
SNRNP35-205ENST00000529201 ISCA1Q9BUE6 129 aa17.41■□□□□ 0.38
SNRNP35-205ENST00000529201 VPS33BQ9H267 617 aa17.41■□□□□ 0.38
SNRNP35-205ENST00000529201 POTEHQ6S545 545 aa17.4■□□□□ 0.38
SNRNP35-205ENST00000529201 C8orf58Q8NAV2 365 aa17.4■□□□□ 0.38
SNRNP35-205ENST00000529201 ZNF277Q9NRM2 450 aaPredicted RBP17.4■□□□□ 0.38
SNRNP35-205ENST00000529201 LAMB2P55268 1798 aa17.4■□□□□ 0.38
SNRNP35-205ENST00000529201 IQCA1LA6NCM1 817 aa17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 POTECB2RU33 542 aa17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 ELL2O00472 640 aaPredicted RBP17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 HSP90B1P14625 803 aaKnown RBP17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 OLFM4Q6UX06 510 aa17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 TMC4Q7Z404 712 aa17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 JDP2Q8WYK2 163 aa17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 L3MBTL3Q96JM7 780 aaPredicted RBP17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 ATP6V0A2Q9Y487 856 aa17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 SCN4AP35499 1836 aa17.39■□□□□ 0.37
SNRNP35-205ENST00000529201 FZD9O00144 591 aa17.38■□□□□ 0.37
SNRNP35-205ENST00000529201 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
SNRNP35-205ENST00000529201 C3orf67Q6ZVT6 689 aa17.38■□□□□ 0.37
SNRNP35-205ENST00000529201 DDX46Q7L014 1031 aaKnown RBP17.38■□□□□ 0.37
SNRNP35-205ENST00000529201 DDNO94850 711 aaPredicted RBP17.37■□□□□ 0.37
SNRNP35-205ENST00000529201 HCLS1P14317 486 aaPredicted RBP17.37■□□□□ 0.37
SNRNP35-205ENST00000529201 WDR63Q8IWG1 891 aa17.37■□□□□ 0.37
SNRNP35-205ENST00000529201 SP8Q8IXZ3 490 aa17.37■□□□□ 0.37
SNRNP35-205ENST00000529201 SUPT20HQ8NEM7 779 aa17.37■□□□□ 0.37
SNRNP35-205ENST00000529201 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
SNRNP35-205ENST00000529201 ABCC4O15439 1325 aa17.37■□□□□ 0.37
SNRNP35-205ENST00000529201 STK31Q9BXU1 1019 aa17.36■□□□□ 0.37
SNRNP35-205ENST00000529201 DDX60Q8IY21 1712 aaKnown RBP17.35■□□□□ 0.37
SNRNP35-205ENST00000529201 ATP5J2-PTCD1G3V325 749 aa17.35■□□□□ 0.37
SNRNP35-205ENST00000529201 GRAPQ13588 217 aa17.35■□□□□ 0.37
SNRNP35-205ENST00000529201 SF3B3Q15393 1217 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms