RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 NYXQ9GZU5 481 aa18.28■□□□□ 0.52
UBXN1-209ENST00000528907 RIC1Q4ADV7 1423 aa18.28■□□□□ 0.52
UBXN1-209ENST00000528907 NEURL1BA8MQ27 555 aa18.27■□□□□ 0.52
UBXN1-209ENST00000528907 TRIM27P14373 513 aa18.27■□□□□ 0.52
UBXN1-209ENST00000528907 SUSD4Q5VX71 490 aa18.27■□□□□ 0.52
UBXN1-209ENST00000528907 TPTE2Q6XPS3 522 aa18.27■□□□□ 0.52
UBXN1-209ENST00000528907 LAMB2P55268 1798 aa18.27■□□□□ 0.51
UBXN1-209ENST00000528907 NTSR2O95665 410 aa18.26■□□□□ 0.51
UBXN1-209ENST00000528907 GPTP24298 496 aa18.26■□□□□ 0.51
UBXN1-209ENST00000528907 BICDL1Q6ZP65 573 aa18.26■□□□□ 0.51
UBXN1-209ENST00000528907 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
UBXN1-209ENST00000528907 ATP5J2-PTCD1G3V325 749 aa18.25■□□□□ 0.51
UBXN1-209ENST00000528907 MS4A1P11836 297 aa18.25■□□□□ 0.51
UBXN1-209ENST00000528907 CCT4P50991 539 aaKnown RBP18.25■□□□□ 0.51
UBXN1-209ENST00000528907 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
UBXN1-209ENST00000528907 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
UBXN1-209ENST00000528907 FRAT1Q92837 279 aaPredicted RBP18.25■□□□□ 0.51
UBXN1-209ENST00000528907 UTP14AQ9BVJ6 771 aaKnown RBP18.25■□□□□ 0.51
UBXN1-209ENST00000528907 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
UBXN1-209ENST00000528907 CWC25Q9NXE8 425 aaPredicted RBP18.25■□□□□ 0.51
UBXN1-209ENST00000528907 GCKRQ14397 625 aa18.24■□□□□ 0.51
UBXN1-209ENST00000528907 SLC10A5Q5PT55 438 aa18.24■□□□□ 0.51
UBXN1-209ENST00000528907 PRR5LQ6MZQ0 368 aa18.24■□□□□ 0.51
UBXN1-209ENST00000528907 NBPF5PQ86XG9 351 aaPredicted RBP18.24■□□□□ 0.51
UBXN1-209ENST00000528907 ZBTB38Q8NAP3 1195 aaPredicted RBP18.24■□□□□ 0.51
UBXN1-209ENST00000528907 ANKRD31Q8N7Z5 1873 aa18.24■□□□□ 0.51
UBXN1-209ENST00000528907 DDX60Q8IY21 1712 aaKnown RBP18.23■□□□□ 0.51
UBXN1-209ENST00000528907 PCCAP05165 728 aaPredicted RBP18.23■□□□□ 0.51
UBXN1-209ENST00000528907 CWF19L2Q2TBE0 894 aaKnown RBP18.23■□□□□ 0.51
UBXN1-209ENST00000528907 CNBD1Q8NA66 436 aa18.23■□□□□ 0.51
UBXN1-209ENST00000528907 UTYO14607 1347 aa18.23■□□□□ 0.51
UBXN1-209ENST00000528907 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
UBXN1-209ENST00000528907 CDHR2Q9BYE9 1310 aa18.23■□□□□ 0.51
UBXN1-209ENST00000528907 H7C1W4 665 aa18.22■□□□□ 0.51
UBXN1-209ENST00000528907 PDE3AQ14432 1141 aa18.22■□□□□ 0.51
UBXN1-209ENST00000528907 SLC4A10Q6U841 1118 aa18.22■□□□□ 0.51
UBXN1-209ENST00000528907 DZIP1LQ8IYY4 767 aaKnown RBP18.22■□□□□ 0.51
UBXN1-209ENST00000528907 KIAA1551Q9HCM1 1747 aa18.22■□□□□ 0.51
UBXN1-209ENST00000528907 ST5P78524 1137 aa18.21■□□□□ 0.51
UBXN1-209ENST00000528907 BRIP1Q9BX63 1249 aa18.21■□□□□ 0.51
UBXN1-209ENST00000528907 TRMT112Q9UI30 125 aaKnown RBP18.21■□□□□ 0.51
UBXN1-209ENST00000528907 PDZRN3Q9UPQ7 1066 aa18.21■□□□□ 0.51
UBXN1-209ENST00000528907 CD2APQ9Y5K6 639 aa18.21■□□□□ 0.51
UBXN1-209ENST00000528907 DLEC1Q9Y238 1755 aa18.2■□□□□ 0.5
UBXN1-209ENST00000528907 KLRG2A4D1S0 409 aaPredicted RBP18.2■□□□□ 0.5
UBXN1-209ENST00000528907 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
UBXN1-209ENST00000528907 CASP7P55210 303 aa18.2■□□□□ 0.5
UBXN1-209ENST00000528907 TNRC6CQ9HCJ0 1690 aaKnown RBP18.19■□□□□ 0.5
UBXN1-209ENST00000528907 RRP1P56182 461 aaKnown RBP18.19■□□□□ 0.5
UBXN1-209ENST00000528907 ERFEQ4G0M1 354 aa18.19■□□□□ 0.5
UBXN1-209ENST00000528907 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
UBXN1-209ENST00000528907 ABCC12Q96J65 1359 aa18.18■□□□□ 0.5
UBXN1-209ENST00000528907 MYH3P11055 1940 aa18.18■□□□□ 0.5
UBXN1-209ENST00000528907 GRM8O00222 908 aa18.18■□□□□ 0.5
UBXN1-209ENST00000528907 GTF2E1P29083 439 aaPredicted RBP18.18■□□□□ 0.5
UBXN1-209ENST00000528907 TGFB2P61812 414 aa18.18■□□□□ 0.5
UBXN1-209ENST00000528907 FTSJ3Q8IY81 847 aaKnown RBP18.18■□□□□ 0.5
UBXN1-209ENST00000528907 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
UBXN1-209ENST00000528907 FAM177BA6PVY3 158 aa18.17■□□□□ 0.5
UBXN1-209ENST00000528907 RLBP1P12271 317 aa18.17■□□□□ 0.5
UBXN1-209ENST00000528907 PDE6BP35913 854 aa18.17■□□□□ 0.5
UBXN1-209ENST00000528907 NUTM1Q86Y26 1132 aa18.17■□□□□ 0.5
UBXN1-209ENST00000528907 TMEM57Q8N5G2 664 aa18.17■□□□□ 0.5
UBXN1-209ENST00000528907 CLUAP1Q96AJ1 413 aa18.17■□□□□ 0.5
UBXN1-209ENST00000528907 FAM89AQ96GI7 184 aa18.17■□□□□ 0.5
UBXN1-209ENST00000528907 USP44Q9H0E7 712 aa18.17■□□□□ 0.5
UBXN1-209ENST00000528907 COL11A2P13942 1736 aaPredicted RBP18.16■□□□□ 0.5
UBXN1-209ENST00000528907 PLIN1O60240 522 aa18.16■□□□□ 0.5
UBXN1-209ENST00000528907 GPR162Q16538 588 aa18.16■□□□□ 0.5
UBXN1-209ENST00000528907 CRY2Q49AN0 593 aa18.16■□□□□ 0.5
UBXN1-209ENST00000528907 C9orf78Q9NZ63 289 aaPredicted RBP18.16■□□□□ 0.5
UBXN1-209ENST00000528907 BRCA1P38398 1863 aaKnown RBP18.16■□□□□ 0.5
UBXN1-209ENST00000528907 IRS4O14654 1257 aaPredicted RBP18.15■□□□□ 0.5
UBXN1-209ENST00000528907 NPHP1O15259 732 aa18.15■□□□□ 0.5
UBXN1-209ENST00000528907 PDE8AO60658 829 aa18.15■□□□□ 0.5
UBXN1-209ENST00000528907 NLRP3Q96P20 1036 aa18.15■□□□□ 0.5
UBXN1-209ENST00000528907 HDAC5Q9UQL6 1122 aa18.15■□□□□ 0.5
UBXN1-209ENST00000528907 NBPF7P0C2Y1 421 aaPredicted RBP18.14■□□□□ 0.49
UBXN1-209ENST00000528907 MVPQ14764 893 aaKnown RBP18.14■□□□□ 0.49
UBXN1-209ENST00000528907 SF3B3Q15393 1217 aaKnown RBP18.14■□□□□ 0.49
UBXN1-209ENST00000528907 UBE3BQ7Z3V4 1068 aa18.14■□□□□ 0.49
UBXN1-209ENST00000528907 SYNE4Q8N205 404 aa18.14■□□□□ 0.49
UBXN1-209ENST00000528907 CENPBP07199 599 aaPredicted RBP18.13■□□□□ 0.49
UBXN1-209ENST00000528907 GNAI3P08754 354 aa18.13■□□□□ 0.49
UBXN1-209ENST00000528907 PANK1Q8TE04 598 aa18.13■□□□□ 0.49
UBXN1-209ENST00000528907 ZBTB7BO15156 539 aaPredicted RBP18.12■□□□□ 0.49
UBXN1-209ENST00000528907 SRGNP10124 158 aa18.12■□□□□ 0.49
UBXN1-209ENST00000528907 CHMP4BQ9H444 224 aaKnown RBP18.12■□□□□ 0.49
UBXN1-209ENST00000528907 DDX19BQ9UMR2 479 aa18.12■□□□□ 0.49
UBXN1-209ENST00000528907 RTL9Q8NET4 1388 aa18.12■□□□□ 0.49
UBXN1-209ENST00000528907 CEP350Q5VT06 3117 aa18.12■□□□□ 0.49
UBXN1-209ENST00000528907 CSF1RP07333 972 aa18.11■□□□□ 0.49
UBXN1-209ENST00000528907 HCLS1P14317 486 aaPredicted RBP18.11■□□□□ 0.49
UBXN1-209ENST00000528907 HOXA10P31260 410 aaPredicted RBP18.11■□□□□ 0.49
UBXN1-209ENST00000528907 STYK1Q6J9G0 422 aa18.11■□□□□ 0.49
UBXN1-209ENST00000528907 CCDC24Q8N4L8 307 aa18.11■□□□□ 0.49
UBXN1-209ENST00000528907 KAZALD1Q96I82 304 aa18.11■□□□□ 0.49
UBXN1-209ENST00000528907 SUPT16HQ9Y5B9 1047 aaKnown RBP18.11■□□□□ 0.49
UBXN1-209ENST00000528907 H0YIN7 160 aa18.1■□□□□ 0.49
UBXN1-209ENST00000528907 UBTFL1P0CB47 393 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms