RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 FAM173BQ6P4H8 233 aa21■□□□□ 0.95
LTBP3-210ENST00000528516 TOM1L2Q6ZVM7 507 aa21■□□□□ 0.95
LTBP3-210ENST00000528516 PAXIP1Q6ZW49 1069 aaPredicted RBP21■□□□□ 0.95
LTBP3-210ENST00000528516 PIK3C2BO00750 1634 aa21■□□□□ 0.95
LTBP3-210ENST00000528516 IQGAP1P46940 1657 aa21■□□□□ 0.95
LTBP3-210ENST00000528516 A2ML1A8K2U0 1454 aa21■□□□□ 0.95
LTBP3-210ENST00000528516 GTF3C6Q969F1 213 aa21■□□□□ 0.95
LTBP3-210ENST00000528516 POLR3GO15318 223 aaPredicted RBP20.99■□□□□ 0.95
LTBP3-210ENST00000528516 KINO60870 393 aaKnown RBP20.99■□□□□ 0.95
LTBP3-210ENST00000528516 SMC2O95347 1197 aa20.99■□□□□ 0.95
LTBP3-210ENST00000528516 ELF2Q15723 593 aa20.99■□□□□ 0.95
LTBP3-210ENST00000528516 RHPN1Q8TCX5 695 aa20.99■□□□□ 0.95
LTBP3-210ENST00000528516 AP5Z1O43299 807 aa20.99■□□□□ 0.95
LTBP3-210ENST00000528516 F13A1P00488 732 aa20.99■□□□□ 0.95
LTBP3-210ENST00000528516 PDILTQ8N807 584 aa20.99■□□□□ 0.95
LTBP3-210ENST00000528516 ZBTB9Q96C00 473 aa20.99■□□□□ 0.95
LTBP3-210ENST00000528516 CPLX2Q6PUV4 134 aaKnown RBP20.99■□□□□ 0.95
LTBP3-210ENST00000528516 ZNF215Q9UL58 517 aaPredicted RBP20.99■□□□□ 0.95
LTBP3-210ENST00000528516 SBNO2Q9Y2G9 1366 aa20.99■□□□□ 0.95
LTBP3-210ENST00000528516 TATP17735 454 aaPredicted RBP20.98■□□□□ 0.95
LTBP3-210ENST00000528516 ANO6Q4KMQ2 910 aa20.98■□□□□ 0.95
LTBP3-210ENST00000528516 GLRX3O76003 335 aaKnown RBP20.98■□□□□ 0.95
LTBP3-210ENST00000528516 UBE3BQ7Z3V4 1068 aa20.98■□□□□ 0.95
LTBP3-210ENST00000528516 KLHDC4Q8TBB5 520 aa20.98■□□□□ 0.95
LTBP3-210ENST00000528516 AKAP17AQ02040 695 aaKnown RBP20.98■□□□□ 0.95
LTBP3-210ENST00000528516 ZBTB3Q9H5J0 574 aa20.98■□□□□ 0.95
LTBP3-210ENST00000528516 ST7Q9NRC1 585 aa20.98■□□□□ 0.95
LTBP3-210ENST00000528516 PHF8Q9UPP1 1060 aa20.98■□□□□ 0.95
LTBP3-210ENST00000528516 NDUFB9Q9Y6M9 179 aa20.98■□□□□ 0.95
LTBP3-210ENST00000528516 TYRO3Q06418 890 aa20.98■□□□□ 0.95
LTBP3-210ENST00000528516 TRIM29Q14134 588 aa20.98■□□□□ 0.95
LTBP3-210ENST00000528516 PNMA6EA0A0J9YXQ4 647 aa20.97■□□□□ 0.95
LTBP3-210ENST00000528516 HAND2P61296 217 aa20.97■□□□□ 0.95
LTBP3-210ENST00000528516 ISM2Q6H9L7 571 aa20.97■□□□□ 0.95
LTBP3-210ENST00000528516 TEX35Q5T0J7 233 aa20.97■□□□□ 0.95
LTBP3-210ENST00000528516 MYOM1P52179 1685 aa20.97■□□□□ 0.95
LTBP3-210ENST00000528516 NRXN1Q9ULB1 1477 aa20.97■□□□□ 0.95
LTBP3-210ENST00000528516 MAP3K19Q56UN5 1328 aa20.96■□□□□ 0.95
LTBP3-210ENST00000528516 PDCP20941 246 aa20.96■□□□□ 0.95
LTBP3-210ENST00000528516 STK38Q15208 465 aa20.96■□□□□ 0.95
LTBP3-210ENST00000528516 DDX46Q7L014 1031 aaKnown RBP20.96■□□□□ 0.95
LTBP3-210ENST00000528516 CABLES1Q8TDN4 633 aa20.96■□□□□ 0.95
LTBP3-210ENST00000528516 PREX1Q8TCU6 1659 aa20.96■□□□□ 0.95
LTBP3-210ENST00000528516 TMEM2Q9UHN6 1383 aa20.96■□□□□ 0.95
LTBP3-210ENST00000528516 GJB2P29033 226 aa20.96■□□□□ 0.95
LTBP3-210ENST00000528516 BRPF1P55201 1214 aaPredicted RBP20.96■□□□□ 0.95
LTBP3-210ENST00000528516 VPS37DQ86XT2 251 aa20.96■□□□□ 0.95
LTBP3-210ENST00000528516 ZSCAN25Q6NSZ9 544 aa20.95■□□□□ 0.94
LTBP3-210ENST00000528516 NSD2O96028 1365 aa20.95■□□□□ 0.94
LTBP3-210ENST00000528516 IL13P35225 146 aa20.95■□□□□ 0.94
LTBP3-210ENST00000528516 LIMCH1Q9UPQ0 1083 aa20.95■□□□□ 0.94
LTBP3-210ENST00000528516 ANAPC15P60006 121 aa20.94■□□□□ 0.94
LTBP3-210ENST00000528516 PRDM11Q9NQV5 511 aa20.94■□□□□ 0.94
LTBP3-210ENST00000528516 A0A087WZG4 1122 aa20.94■□□□□ 0.94
LTBP3-210ENST00000528516 CLSTN1O94985 981 aa20.94■□□□□ 0.94
LTBP3-210ENST00000528516 CHMLP26374 656 aa20.94■□□□□ 0.94
LTBP3-210ENST00000528516 ZNF165P49910 485 aa20.94■□□□□ 0.94
LTBP3-210ENST00000528516 MORC2Q9Y6X9 1032 aaPredicted RBP20.94■□□□□ 0.94
LTBP3-210ENST00000528516 ADGRB1O14514 1584 aa20.93■□□□□ 0.94
LTBP3-210ENST00000528516 CNNM1Q9NRU3 951 aa20.93■□□□□ 0.94
LTBP3-210ENST00000528516 IDH1O75874 414 aaKnown RBP20.93■□□□□ 0.94
LTBP3-210ENST00000528516 KMT5BQ4FZB7 885 aa20.93■□□□□ 0.94
LTBP3-210ENST00000528516 CHST3Q7LGC8 479 aa20.93■□□□□ 0.94
LTBP3-210ENST00000528516 PPLO60437 1756 aa20.93■□□□□ 0.94
LTBP3-210ENST00000528516 PTPRCP08575 1304 aa20.92■□□□□ 0.94
LTBP3-210ENST00000528516 ERC1Q8IUD2 1116 aa20.92■□□□□ 0.94
LTBP3-210ENST00000528516 ZFP91Q96JP5 570 aaPredicted RBP20.92■□□□□ 0.94
LTBP3-210ENST00000528516 DACT1Q9NYF0 836 aa20.92■□□□□ 0.94
LTBP3-210ENST00000528516 BIN1O00499 593 aa20.92■□□□□ 0.94
LTBP3-210ENST00000528516 AK2P54819 239 aa20.92■□□□□ 0.94
LTBP3-210ENST00000528516 DNAJC25Q9H1X3 360 aa20.92■□□□□ 0.94
LTBP3-210ENST00000528516 CBX8Q9HC52 389 aa20.92■□□□□ 0.94
LTBP3-210ENST00000528516 MSH6P52701 1360 aa20.92■□□□□ 0.94
LTBP3-210ENST00000528516 IRX3P78415 501 aaPredicted RBP20.92■□□□□ 0.94
LTBP3-210ENST00000528516 ECHDC1Q9NTX5 307 aa20.92■□□□□ 0.94
LTBP3-210ENST00000528516 MYO5BQ9ULV0 1848 aa20.91■□□□□ 0.94
LTBP3-210ENST00000528516 GPTP24298 496 aa20.91■□□□□ 0.94
LTBP3-210ENST00000528516 SKILP12757 684 aa20.91■□□□□ 0.94
LTBP3-210ENST00000528516 BMS1Q14692 1282 aaKnown RBP20.91■□□□□ 0.94
LTBP3-210ENST00000528516 FBXO38Q6PIJ6 1188 aa20.91■□□□□ 0.94
LTBP3-210ENST00000528516 LGR6Q9HBX8 967 aa20.9■□□□□ 0.94
LTBP3-210ENST00000528516 DBF4Q9UBU7 674 aaPredicted RBP20.9■□□□□ 0.94
LTBP3-210ENST00000528516 AGLP35573 1532 aa20.9■□□□□ 0.94
LTBP3-210ENST00000528516 GOLIM4O00461 696 aa20.9■□□□□ 0.94
LTBP3-210ENST00000528516 ANKLE2Q86XL3 938 aa20.9■□□□□ 0.94
LTBP3-210ENST00000528516 ZFYVE9O95405 1425 aa20.9■□□□□ 0.94
LTBP3-210ENST00000528516 ZNF75DP51815 510 aa20.9■□□□□ 0.94
LTBP3-210ENST00000528516 SAMD1Q6SPF0 538 aaPredicted RBP20.9■□□□□ 0.94
LTBP3-210ENST00000528516 CCDC144CPQ8IYA2 1237 aa20.9■□□□□ 0.94
LTBP3-210ENST00000528516 CACTINQ8WUQ7 758 aaKnown RBP20.9■□□□□ 0.94
LTBP3-210ENST00000528516 ALKQ9UM73 1620 aa20.89■□□□□ 0.94
LTBP3-210ENST00000528516 CEP126Q9P2H0 1117 aa20.89■□□□□ 0.94
LTBP3-210ENST00000528516 SHPRHQ149N8 1683 aa20.89■□□□□ 0.93
LTBP3-210ENST00000528516 NBPF7P0C2Y1 421 aaPredicted RBP20.89■□□□□ 0.93
LTBP3-210ENST00000528516 HSP90AB3PQ58FF7 597 aa20.89■□□□□ 0.93
LTBP3-210ENST00000528516 TTC39AQ5SRH9 613 aa20.89■□□□□ 0.93
LTBP3-210ENST00000528516 SYCP1Q15431 976 aa20.89■□□□□ 0.93
LTBP3-210ENST00000528516 QRICH2Q9H0J4 1663 aa20.89■□□□□ 0.93
LTBP3-210ENST00000528516 DHX16O60231 1041 aaKnown RBP20.88■□□□□ 0.93
LTBP3-210ENST00000528516 SLU7O95391 586 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms