RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 PDCL2Q8N4E4 241 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 SSH3Q8TE77 659 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 ZBTB9Q96C00 473 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 DNAJC25Q9H1X3 360 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 TNMDQ9H2S6 317 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 PSME1Q06323 249 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 NMIQ13287 307 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-206ENST00000528302 ARID5BQ14865 1188 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 LARP1Q6PKG0 1096 aaKnown RBP11.73□□□□□ -0.53
SF3B2-206ENST00000528302 FAM184AQ8NB25 1140 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 DDX17Q92841 729 aaKnown RBP11.73□□□□□ -0.53
SF3B2-206ENST00000528302 CCDC94Q9BW85 323 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-206ENST00000528302 FTOQ9C0B1 505 aaKnown RBP eCLIP11.73□□□□□ -0.536e-6■□□□□ 9.3
SF3B2-206ENST00000528302 NUP62CLQ9H1M0 184 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 MAP3K2Q9Y2U5 619 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-206ENST00000528302 PLEKHG3A1L390 1219 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 MYL6BP14649 208 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 TERF1P54274 439 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 ST3GAL1Q11201 340 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 CCDC129Q6ZRS4 1044 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 THEMISQ8N1K5 641 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-206ENST00000528302 TRMT1Q9NXH9 659 aaKnown RBP11.73□□□□□ -0.53
SF3B2-206ENST00000528302 ATP6V1DQ9Y5K8 247 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 KIF13AQ9H1H9 1805 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 CDC42BPGQ6DT37 1551 aa11.73□□□□□ -0.53
SF3B2-206ENST00000528302 SETD1AO15047 1707 aaKnown RBP11.73□□□□□ -0.53
SF3B2-206ENST00000528302 TYRO3Q06418 890 aa11.72□□□□□ -0.53
SF3B2-206ENST00000528302 FILIP1Q7Z7B0 1213 aa11.72□□□□□ -0.53
SF3B2-206ENST00000528302 SPATA32Q96LK8 384 aa11.72□□□□□ -0.53
SF3B2-206ENST00000528302 MAP3K11Q16584 847 aa11.72□□□□□ -0.53
SF3B2-206ENST00000528302 ORAI2Q96SN7 254 aa11.72□□□□□ -0.53
SF3B2-206ENST00000528302 AGLP35573 1532 aa11.72□□□□□ -0.53
SF3B2-206ENST00000528302 A0A0D9SFI3 127 aa11.71□□□□□ -0.53
SF3B2-206ENST00000528302 HOXC9P31274 260 aa11.71□□□□□ -0.53
SF3B2-206ENST00000528302 KRT85P78386 507 aa11.71□□□□□ -0.53
SF3B2-206ENST00000528302 CREB3L3Q68CJ9 461 aa11.71□□□□□ -0.53
SF3B2-206ENST00000528302 TICAM2Q86XR7 235 aa11.71□□□□□ -0.53
SF3B2-206ENST00000528302 DNAJC2Q99543 621 aaKnown RBP11.71□□□□□ -0.53
SF3B2-206ENST00000528302 BTBD11A6QL63 1104 aa11.71□□□□□ -0.53
SF3B2-206ENST00000528302 GLRX3O76003 335 aaKnown RBP11.71□□□□□ -0.53
SF3B2-206ENST00000528302 NR1I2O75469 434 aa11.71□□□□□ -0.54
SF3B2-206ENST00000528302 CHST3Q7LGC8 479 aa11.71□□□□□ -0.54
SF3B2-206ENST00000528302 RAB11FIP4Q86YS3 637 aa11.71□□□□□ -0.54
SF3B2-206ENST00000528302 ECHDC1Q9NTX5 307 aa11.71□□□□□ -0.54
SF3B2-206ENST00000528302 TPD52L1Q16890 204 aaPredicted RBP11.7□□□□□ -0.54
SF3B2-206ENST00000528302 TMED8Q6PL24 325 aaPredicted RBP11.7□□□□□ -0.54
SF3B2-206ENST00000528302 BLOC1S2Q6QNY1 142 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 KIAA1524Q8TCG1 905 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 RUFY2Q8WXA3 655 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 FMNL2Q96PY5 1086 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 SEC62Q99442 399 aaKnown RBP11.7□□□□□ -0.54
SF3B2-206ENST00000528302 CBX8Q9HC52 389 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 ITSN1Q15811 1721 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 H3BQV1 296 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 ZC3H6P61129 1189 aaKnown RBP11.7□□□□□ -0.54
SF3B2-206ENST00000528302 HMGN5P82970 282 aaKnown RBP11.7□□□□□ -0.54
SF3B2-206ENST00000528302 SLC39A6Q13433 755 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 UVSSAQ2YD98 709 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 IFFO2Q5TF58 517 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 ZNF530Q6P9A1 599 aaPredicted RBP11.7□□□□□ -0.54
SF3B2-206ENST00000528302 ZNF589Q86UQ0 364 aaPredicted RBP11.7□□□□□ -0.54
SF3B2-206ENST00000528302 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
SF3B2-206ENST00000528302 MRVI1Q9Y6F6 885 aa11.7□□□□□ -0.54
SF3B2-206ENST00000528302 CEP170BQ9Y4F5 1589 aaPredicted RBP11.7□□□□□ -0.54
SF3B2-206ENST00000528302 CCT2P78371 535 aaKnown RBP11.7□□□□□ -0.54
SF3B2-206ENST00000528302 G3BP1Q13283 466 aaKnown RBP eCLIP11.7□□□□□ -0.541e-6■■■□□ 17
SF3B2-206ENST00000528302 FLT4P35916 1363 aa11.69□□□□□ -0.54
SF3B2-206ENST00000528302 BEND3Q5T5X7 828 aa11.69□□□□□ -0.54
SF3B2-206ENST00000528302 NBPF6Q5VWK0 638 aa11.69□□□□□ -0.54
SF3B2-206ENST00000528302 NBPF4Q96M43 638 aa11.69□□□□□ -0.54
SF3B2-206ENST00000528302 GOLGA6L6A8MZA4 724 aa11.69□□□□□ -0.54
SF3B2-206ENST00000528302 TNNT1P13805 278 aa11.69□□□□□ -0.54
SF3B2-206ENST00000528302 PRIMPOLQ96LW4 560 aa11.69□□□□□ -0.54
SF3B2-206ENST00000528302 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
SF3B2-206ENST00000528302 ZNF165P49910 485 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 PLEKHG1Q9ULL1 1385 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 CCDC171Q6TFL3 1326 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 PEAK1Q9H792 1746 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 SLC27A2O14975 620 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
SF3B2-206ENST00000528302 ISM2Q6H9L7 571 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 FAM200AQ8TCP9 573 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 BICC1Q9H694 974 aaKnown RBP11.68□□□□□ -0.54
SF3B2-206ENST00000528302 OVOS2A0A0J9YW53 1432 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 OVOS2Q6IE36 1432 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 LETM1O95202 739 aaPredicted RBP11.68□□□□□ -0.54
SF3B2-206ENST00000528302 PTPN21Q16825 1174 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 GPATCH3Q96I76 525 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 FUCA2Q9BTY2 467 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 CLIP2Q9UDT6 1046 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
SF3B2-206ENST00000528302 ZSCAN20P17040 1043 aaPredicted RBP11.67□□□□□ -0.54
SF3B2-206ENST00000528302 EIF4A1P60842 406 aaKnown RBP11.67□□□□□ -0.54
SF3B2-206ENST00000528302 MTERF4Q7Z6M4 381 aaKnown RBP11.67□□□□□ -0.54
SF3B2-206ENST00000528302 SUCLG2Q96I99 432 aa11.67□□□□□ -0.54
SF3B2-206ENST00000528302 TBX22Q9Y458 520 aa11.67□□□□□ -0.54
SF3B2-206ENST00000528302 POLA2Q14181 598 aa11.67□□□□□ -0.54
SF3B2-206ENST00000528302 CCDC144BQ3MJ40 725 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms