RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 BCAR3O75815 825 aa16.47■□□□□ 0.23
SCN3B-205ENST00000528267 DPEP1P16444 411 aa16.47■□□□□ 0.23
SCN3B-205ENST00000528267 CWF19L2Q2TBE0 894 aaKnown RBP16.47■□□□□ 0.23
SCN3B-205ENST00000528267 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
SCN3B-205ENST00000528267 C3orf67Q6ZVT6 689 aa16.47■□□□□ 0.23
SCN3B-205ENST00000528267 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
SCN3B-205ENST00000528267 WWC3Q9ULE0 1092 aa16.47■□□□□ 0.23
SCN3B-205ENST00000528267 A0A0G2JLW4 131 aa16.46■□□□□ 0.23
SCN3B-205ENST00000528267 PARP10Q53GL7 1025 aa16.46■□□□□ 0.23
SCN3B-205ENST00000528267 TNNQ9UQP3 1299 aa16.46■□□□□ 0.23
SCN3B-205ENST00000528267 TAF1P21675 1872 aa16.46■□□□□ 0.22
SCN3B-205ENST00000528267 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
SCN3B-205ENST00000528267 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
SCN3B-205ENST00000528267 BRPF1P55201 1214 aaPredicted RBP16.45■□□□□ 0.22
SCN3B-205ENST00000528267 TRIM28Q13263 835 aaKnown RBP16.45■□□□□ 0.22
SCN3B-205ENST00000528267 DNAAF4Q8WXU2 420 aa16.45■□□□□ 0.22
SCN3B-205ENST00000528267 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
SCN3B-205ENST00000528267 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
SCN3B-205ENST00000528267 NEURL1BA8MQ27 555 aa16.44■□□□□ 0.22
SCN3B-205ENST00000528267 TGFB2P61812 414 aa16.44■□□□□ 0.22
SCN3B-205ENST00000528267 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
SCN3B-205ENST00000528267 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
SCN3B-205ENST00000528267 BRIP1Q9BX63 1249 aa16.44■□□□□ 0.22
SCN3B-205ENST00000528267 SLX4Q8IY92 1834 aa16.44■□□□□ 0.22
SCN3B-205ENST00000528267 KLRG2A4D1S0 409 aaPredicted RBP16.43■□□□□ 0.22
SCN3B-205ENST00000528267 YBX3P16989 372 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCN3B-205ENST00000528267 ST5P78524 1137 aa16.43■□□□□ 0.22
SCN3B-205ENST00000528267 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
SCN3B-205ENST00000528267 SLC51AQ86UW1 340 aa16.43■□□□□ 0.22
SCN3B-205ENST00000528267 FAM89AQ96GI7 184 aa16.43■□□□□ 0.22
SCN3B-205ENST00000528267 NOB1Q9ULX3 412 aaKnown RBP16.43■□□□□ 0.22
SCN3B-205ENST00000528267 MYH3P11055 1940 aa16.43■□□□□ 0.22
SCN3B-205ENST00000528267 RTL5Q5HYW3 569 aaPredicted RBP16.42■□□□□ 0.22
SCN3B-205ENST00000528267 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
SCN3B-205ENST00000528267 NYXQ9GZU5 481 aa16.42■□□□□ 0.22
SCN3B-205ENST00000528267 PTPRCP08575 1304 aa16.42■□□□□ 0.22
SCN3B-205ENST00000528267 HCLS1P14317 486 aaPredicted RBP16.41■□□□□ 0.22
SCN3B-205ENST00000528267 CASP7P55210 303 aa16.41■□□□□ 0.22
SCN3B-205ENST00000528267 SLC10A5Q5PT55 438 aa16.41■□□□□ 0.22
SCN3B-205ENST00000528267 C2CD5Q86YS7 1000 aa16.41■□□□□ 0.22
SCN3B-205ENST00000528267 CCDC191Q8NCU4 936 aa16.41■□□□□ 0.22
SCN3B-205ENST00000528267 TRMT112Q9UI30 125 aaKnown RBP16.41■□□□□ 0.22
SCN3B-205ENST00000528267 SRGNP10124 158 aa16.4■□□□□ 0.22
SCN3B-205ENST00000528267 CRY2Q49AN0 593 aa16.4■□□□□ 0.22
SCN3B-205ENST00000528267 LINS1Q8NG48 757 aa16.4■□□□□ 0.22
SCN3B-205ENST00000528267 CWC25Q9NXE8 425 aaPredicted RBP16.4■□□□□ 0.22
SCN3B-205ENST00000528267 RNF123Q5XPI4 1314 aa16.4■□□□□ 0.22
SCN3B-205ENST00000528267 SH3TC1Q8TE82 1336 aa16.4■□□□□ 0.22
SCN3B-205ENST00000528267 PCCAP05165 728 aaPredicted RBP16.39■□□□□ 0.21
SCN3B-205ENST00000528267 GCKRQ14397 625 aa16.39■□□□□ 0.21
SCN3B-205ENST00000528267 ZBTB38Q8NAP3 1195 aaPredicted RBP16.39■□□□□ 0.21
SCN3B-205ENST00000528267 H7C1W4 665 aa16.38■□□□□ 0.21
SCN3B-205ENST00000528267 NPHP1O15259 732 aa16.38■□□□□ 0.21
SCN3B-205ENST00000528267 TRIM27P14373 513 aa16.38■□□□□ 0.21
SCN3B-205ENST00000528267 PDE6BP35913 854 aa16.38■□□□□ 0.21
SCN3B-205ENST00000528267 SLC4A10Q6U841 1118 aa16.38■□□□□ 0.21
SCN3B-205ENST00000528267 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
SCN3B-205ENST00000528267 NEXNQ0ZGT2 675 aa16.37■□□□□ 0.21
SCN3B-205ENST00000528267 SPEF2Q9C093 1822 aa16.37■□□□□ 0.21
SCN3B-205ENST00000528267 ABCC4O15439 1325 aa16.37■□□□□ 0.21
SCN3B-205ENST00000528267 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
SCN3B-205ENST00000528267 CDHR2Q9BYE9 1310 aa16.37■□□□□ 0.21
SCN3B-205ENST00000528267 H0YIN7 160 aa16.36■□□□□ 0.21
SCN3B-205ENST00000528267 IRS4O14654 1257 aaPredicted RBP16.36■□□□□ 0.21
SCN3B-205ENST00000528267 UBE3BQ7Z3V4 1068 aa16.36■□□□□ 0.21
SCN3B-205ENST00000528267 LRRC37AA6NMS7 1700 aa16.36■□□□□ 0.21
SCN3B-205ENST00000528267 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
SCN3B-205ENST00000528267 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
SCN3B-205ENST00000528267 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
SCN3B-205ENST00000528267 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
SCN3B-205ENST00000528267 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
SCN3B-205ENST00000528267 ALDH1L1O75891 902 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 NBPF7P0C2Y1 421 aaPredicted RBP16.34■□□□□ 0.21
SCN3B-205ENST00000528267 RLBP1P12271 317 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 HOXA10P31260 410 aaPredicted RBP16.34■□□□□ 0.21
SCN3B-205ENST00000528267 EPHA10Q5JZY3 1008 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 STYK1Q6J9G0 422 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 OLFM4Q6UX06 510 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 ATF7IPQ6VMQ6 1270 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
SCN3B-205ENST00000528267 ARHGAP45Q92619 1136 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCN3B-205ENST00000528267 KAZALD1Q96I82 304 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 API5Q9BZZ5 524 aaKnown RBP16.34■□□□□ 0.21
SCN3B-205ENST00000528267 SRCIN1Q9C0H9 1055 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 RCAN3Q9UKA8 241 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
SCN3B-205ENST00000528267 NPR1P16066 1061 aa16.33■□□□□ 0.2
SCN3B-205ENST00000528267 SF3B3Q15393 1217 aaKnown RBP16.33■□□□□ 0.2
SCN3B-205ENST00000528267 NLRP3Q96P20 1036 aa16.33■□□□□ 0.2
SCN3B-205ENST00000528267 UTYO14607 1347 aa16.33■□□□□ 0.2
SCN3B-205ENST00000528267 SBF1O95248 1867 aa16.33■□□□□ 0.2
SCN3B-205ENST00000528267 A0A1B0GUL6 1792 aa16.32■□□□□ 0.2
SCN3B-205ENST00000528267 GRM8O00222 908 aa16.32■□□□□ 0.2
SCN3B-205ENST00000528267 LTBP1Q14766 1721 aa16.32■□□□□ 0.2
SCN3B-205ENST00000528267 DALRD3Q5D0E6 543 aaKnown RBP16.32■□□□□ 0.2
SCN3B-205ENST00000528267 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
SCN3B-205ENST00000528267 TTLL6Q8N841 843 aa16.32■□□□□ 0.2
SCN3B-205ENST00000528267 C7orf43Q8WVR3 580 aa16.32■□□□□ 0.2
SCN3B-205ENST00000528267 CLUAP1Q96AJ1 413 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms