RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 RUNDC1Q96C34 613 aa9.43□□□□□ -0.9
PTP4A2-210ENST00000528253 ADAMTS8Q9UP79 889 aa9.43□□□□□ -0.9
PTP4A2-210ENST00000528253 CANXP27824 592 aaKnown RBP9.42□□□□□ -0.9
PTP4A2-210ENST00000528253 TMPOP42166 694 aaKnown RBP9.42□□□□□ -0.9
PTP4A2-210ENST00000528253 CCDC146Q8IYE0 955 aa9.42□□□□□ -0.9
PTP4A2-210ENST00000528253 DAXXQ9UER7 740 aaPredicted RBP9.42□□□□□ -0.9
PTP4A2-210ENST00000528253 KCNQ3O43525 872 aa9.41□□□□□ -0.9
PTP4A2-210ENST00000528253 SNRPA1P09661 255 aaKnown RBP9.41□□□□□ -0.9
PTP4A2-210ENST00000528253 GYS1P13807 737 aa9.41□□□□□ -0.9
PTP4A2-210ENST00000528253 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
PTP4A2-210ENST00000528253 MIS18AQ9NYP9 233 aa9.41□□□□□ -0.9
PTP4A2-210ENST00000528253 ZBTB1Q9Y2K1 713 aa9.41□□□□□ -0.9
PTP4A2-210ENST00000528253 CD2APQ9Y5K6 639 aa9.41□□□□□ -0.9
PTP4A2-210ENST00000528253 PARP3Q9Y6F1 533 aa9.41□□□□□ -0.9
PTP4A2-210ENST00000528253 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 GOLGB1Q14789 3259 aaKnown RBP9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 SOS1Q07889 1333 aaPredicted RBP9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 A0A087WZG4 1122 aa9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 MMP10P09238 476 aa9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 MLLT3P42568 568 aaPredicted RBP9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 MAP3K9P80192 1104 aa9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 GPR162Q16538 588 aa9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 ERICH6Q7L0X2 663 aa9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 GPIHBP1Q8IV16 184 aa9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 NARFQ9UHQ1 456 aa9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 RRP7AQ9Y3A4 280 aaKnown RBP9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 ZNF330Q9Y3S2 320 aaPredicted RBP9.4□□□□□ -0.9
PTP4A2-210ENST00000528253 UTRNP46939 3433 aa9.4□□□□□ -0.91
PTP4A2-210ENST00000528253 COL15A1P39059 1388 aa9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 USP42Q9H9J4 1324 aaKnown RBP9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 ZMYND10O75800 440 aa9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 IL6STP40189 918 aaPredicted RBP9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 EIF5P55010 431 aaKnown RBP9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 C3orf67Q6ZVT6 689 aa9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 THUMPD2Q9BTF0 503 aaKnown RBP9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 BABAM1Q9NWV8 329 aa9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 SRP68Q9UHB9 627 aaKnown RBP9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 TSPYL4Q9UJ04 414 aa9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 USP16Q9Y5T5 823 aa9.39□□□□□ -0.91
PTP4A2-210ENST00000528253 AFDNP55196 1824 aaKnown RBP9.38□□□□□ -0.91
PTP4A2-210ENST00000528253 KIF13BQ9NQT8 1826 aa9.38□□□□□ -0.91
PTP4A2-210ENST00000528253 A1BGP04217 495 aa9.38□□□□□ -0.91
PTP4A2-210ENST00000528253 USPL1Q5W0Q7 1092 aa9.38□□□□□ -0.91
PTP4A2-210ENST00000528253 NLGN2Q8NFZ4 835 aa9.38□□□□□ -0.91
PTP4A2-210ENST00000528253 LAMB4A4D0S4 1761 aa9.37□□□□□ -0.91
PTP4A2-210ENST00000528253 N4BP2Q86UW6 1770 aaPredicted RBP9.37□□□□□ -0.91
PTP4A2-210ENST00000528253 PRAMEF22A3QJZ6 481 aa9.37□□□□□ -0.91
PTP4A2-210ENST00000528253 EIF4A1P60842 406 aaKnown RBP9.37□□□□□ -0.91
PTP4A2-210ENST00000528253 TMEM132AQ24JP5 1023 aa9.37□□□□□ -0.91
PTP4A2-210ENST00000528253 RBM26Q5T8P6 1007 aaKnown RBP9.37□□□□□ -0.91
PTP4A2-210ENST00000528253 MRS2Q9HD23 443 aa9.37□□□□□ -0.91
PTP4A2-210ENST00000528253 LAS1LQ9Y4W2 734 aaKnown RBP9.37□□□□□ -0.91
PTP4A2-210ENST00000528253 APAF1O14727 1248 aa9.36□□□□□ -0.91
PTP4A2-210ENST00000528253 GIGYF1O75420 1035 aaPredicted RBP9.36□□□□□ -0.91
PTP4A2-210ENST00000528253 TM4SF1P30408 202 aa9.36□□□□□ -0.91
PTP4A2-210ENST00000528253 TGFB2P61812 414 aa9.36□□□□□ -0.91
PTP4A2-210ENST00000528253 CCDC184Q52MB2 194 aa9.36□□□□□ -0.91
PTP4A2-210ENST00000528253 SLC24A3Q9HC58 644 aa9.36□□□□□ -0.91
PTP4A2-210ENST00000528253 TBC1D2BQ9UPU7 963 aa9.36□□□□□ -0.91
PTP4A2-210ENST00000528253 NUP98P52948 1817 aa9.35□□□□□ -0.91
PTP4A2-210ENST00000528253 TBC1D12O60347 775 aa9.35□□□□□ -0.91
PTP4A2-210ENST00000528253 GRIN3BO60391 1043 aa9.35□□□□□ -0.91
PTP4A2-210ENST00000528253 CALD1Q05682 793 aaKnown RBP9.35□□□□□ -0.91
PTP4A2-210ENST00000528253 DZIP3Q86Y13 1208 aaKnown RBP9.35□□□□□ -0.91
PTP4A2-210ENST00000528253 POLRMTO00411 1230 aaKnown RBP9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 CHL1O00533 1208 aa9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 YY1P25490 414 aa9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 PIP4K2AP48426 406 aaPredicted RBP9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 NFIXQ14938 502 aa9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 TMEM92Q6UXU6 159 aa9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 BICDL1Q6ZP65 573 aa9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 OXER1Q8TDS5 423 aa9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 SETDB2Q96T68 719 aa9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 BCL2L12Q9HB09 334 aa9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 ZNF652Q9Y2D9 606 aa9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 BCORQ6W2J9 1755 aa9.34□□□□□ -0.91
PTP4A2-210ENST00000528253 A0A0G2JLW4 131 aa9.33□□□□□ -0.92
PTP4A2-210ENST00000528253 NBPF26B4DH59 902 aa9.33□□□□□ -0.92
PTP4A2-210ENST00000528253 NPHP1O15259 732 aa9.33□□□□□ -0.92
PTP4A2-210ENST00000528253 SERPINB2P05120 415 aa9.33□□□□□ -0.92
PTP4A2-210ENST00000528253 EIF2S2P20042 333 aaKnown RBP9.33□□□□□ -0.92
PTP4A2-210ENST00000528253 DDR1Q08345 913 aa9.33□□□□□ -0.92
PTP4A2-210ENST00000528253 NBPF10Q6P3W6 841 aaKnown RBP9.33□□□□□ -0.92
PTP4A2-210ENST00000528253 CLEC4GQ6UXB4 293 aa9.33□□□□□ -0.92
PTP4A2-210ENST00000528253 NGEFQ8N5V2 710 aa9.33□□□□□ -0.92
PTP4A2-210ENST00000528253 NBPF15Q8N660 670 aa9.33□□□□□ -0.92
PTP4A2-210ENST00000528253 SCN7AQ01118 1682 aa9.32□□□□□ -0.92
PTP4A2-210ENST00000528253 BRCA1P38398 1863 aaKnown RBP9.32□□□□□ -0.92
PTP4A2-210ENST00000528253 NRXN2Q9P2S2 1712 aa9.32□□□□□ -0.92
PTP4A2-210ENST00000528253 CAMTA2O94983 1202 aa9.32□□□□□ -0.92
PTP4A2-210ENST00000528253 MYL6BP14649 208 aa9.32□□□□□ -0.92
PTP4A2-210ENST00000528253 BRPF1P55201 1214 aaPredicted RBP9.32□□□□□ -0.92
PTP4A2-210ENST00000528253 GNAI1P63096 354 aa9.32□□□□□ -0.92
PTP4A2-210ENST00000528253 TBC1D9BQ66K14 1250 aa9.32□□□□□ -0.92
PTP4A2-210ENST00000528253 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
PTP4A2-210ENST00000528253 C10orf71Q711Q0 1435 aa9.31□□□□□ -0.92
PTP4A2-210ENST00000528253 KIAA1551Q9HCM1 1747 aa9.31□□□□□ -0.92
PTP4A2-210ENST00000528253 ARFGEF1Q9Y6D6 1849 aa9.31□□□□□ -0.92
PTP4A2-210ENST00000528253 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
PTP4A2-210ENST00000528253 DPEP1P16444 411 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms