RNA–Protein interactions for RNA: ENST00000528248.1

PKD2L1-203, Transcript of polycystin 2 like 1, transient receptor potential cation channel, humanhuman

TSL 1 (best)

Gene PKD2L1, Length 2,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2L1-203ENST00000528248 UBE2HP62256 183 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 CREB3L3Q68CJ9 461 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 CCDC39Q9UFE4 941 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 ADAMTSL3P82987 1691 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 ZNF500O60304 480 aaPredicted RBP18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 GJB2P29033 226 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 NMIQ13287 307 aaPredicted RBP18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 GCKRQ14397 625 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 CCDC183Q5T5S1 534 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 PROSER2Q86WR7 435 aaPredicted RBP18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 CCDC83Q8IWF9 413 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 RNF214Q8ND24 703 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 METTL22Q9BUU2 404 aaPredicted RBP18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 C5P01031 1676 aa18.11■□□□□ 0.49
PKD2L1-203ENST00000528248 KDM6AO15550 1401 aaPredicted RBP18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 TATP17735 454 aaPredicted RBP18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 PSMA5P28066 241 aa18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 ZC3H6P61129 1189 aaKnown RBP18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 CSPP1Q1MSJ5 1256 aa18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 KLHL34Q8N239 644 aa18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 FAM184AQ8NB25 1140 aa18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 FAM227BQ96M60 508 aa18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 MRC1P22897 1456 aa18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 PDIA4P13667 645 aaKnown RBP18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 PHKG2P15735 406 aa18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 KCNJ4P48050 445 aa18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 XAGE3Q8WTP9 111 aa18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 ALS2Q96Q42 1657 aa18.1■□□□□ 0.49
PKD2L1-203ENST00000528248 UVSSAQ2YD98 709 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 COPS6Q7L5N1 327 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 C19orf44Q9H6X5 657 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 ZKSCAN5Q9Y2L8 839 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 TPM2P07951 284 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 MYL6BP14649 208 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 SIL1Q9H173 461 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 BOLA2Q9H3K6 86 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 NLRP2Q9NX02 1062 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 TLR7Q9NYK1 1049 aaKnown RBP18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 MTMR6Q9Y217 621 aa18.09■□□□□ 0.49
PKD2L1-203ENST00000528248 SLC27A2O14975 620 aa18.08■□□□□ 0.48
PKD2L1-203ENST00000528248 ME3Q16798 604 aa18.08■□□□□ 0.48
PKD2L1-203ENST00000528248 RNF20Q5VTR2 975 aa18.08■□□□□ 0.48
PKD2L1-203ENST00000528248 FSD1Q9BTV5 496 aa18.08■□□□□ 0.48
PKD2L1-203ENST00000528248 ABCC6O95255 1503 aa18.08■□□□□ 0.48
PKD2L1-203ENST00000528248 IFNL2Q8IZJ0 200 aa18.07■□□□□ 0.48
PKD2L1-203ENST00000528248 MYD88Q99836 296 aa18.07■□□□□ 0.48
PKD2L1-203ENST00000528248 PLEKHG2Q9H7P9 1386 aa18.07■□□□□ 0.48
PKD2L1-203ENST00000528248 ANKRD13DQ6ZTN6 518 aa18.07■□□□□ 0.48
PKD2L1-203ENST00000528248 ALDH8A1Q9H2A2 487 aaPredicted RBP18.07■□□□□ 0.48
PKD2L1-203ENST00000528248 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
PKD2L1-203ENST00000528248 MED23Q9ULK4 1368 aa18.06■□□□□ 0.48
PKD2L1-203ENST00000528248 A0A0D9SFI3 127 aa18.06■□□□□ 0.48
PKD2L1-203ENST00000528248 SNRPA1P09661 255 aaKnown RBP18.06■□□□□ 0.48
PKD2L1-203ENST00000528248 ST3GAL1Q11201 340 aa18.06■□□□□ 0.48
PKD2L1-203ENST00000528248 ANKRD1Q15327 319 aa18.06■□□□□ 0.48
PKD2L1-203ENST00000528248 ZNF496Q96IT1 587 aaPredicted RBP18.06■□□□□ 0.48
PKD2L1-203ENST00000528248 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
PKD2L1-203ENST00000528248 KLHDC4Q8TBB5 520 aa18.06■□□□□ 0.48
PKD2L1-203ENST00000528248 TPCN1Q9ULQ1 816 aa18.06■□□□□ 0.48
PKD2L1-203ENST00000528248 TERF1P54274 439 aa18.05■□□□□ 0.48
PKD2L1-203ENST00000528248 LRP10Q7Z4F1 713 aa18.05■□□□□ 0.48
PKD2L1-203ENST00000528248 HMG20BQ9P0W2 317 aa18.05■□□□□ 0.48
PKD2L1-203ENST00000528248 COL15A1P39059 1388 aa18.05■□□□□ 0.48
PKD2L1-203ENST00000528248 JCADQ9P266 1359 aa18.05■□□□□ 0.48
PKD2L1-203ENST00000528248 FIBPO43427 364 aa18.05■□□□□ 0.48
PKD2L1-203ENST00000528248 TSGA10IPQ3SY00 556 aa18.05■□□□□ 0.48
PKD2L1-203ENST00000528248 BLOC1S2Q6QNY1 142 aa18.05■□□□□ 0.48
PKD2L1-203ENST00000528248 TTC5Q8N0Z6 440 aa18.05■□□□□ 0.48
PKD2L1-203ENST00000528248 DCAF5Q96JK2 942 aa18.05■□□□□ 0.48
PKD2L1-203ENST00000528248 ATP5JP18859 108 aa18.04■□□□□ 0.48
PKD2L1-203ENST00000528248 DNM1Q05193 864 aaKnown RBP18.04■□□□□ 0.48
PKD2L1-203ENST00000528248 MEGF6O75095 1541 aa18.04■□□□□ 0.48
PKD2L1-203ENST00000528248 RFX5P48382 616 aaPredicted RBP18.03■□□□□ 0.48
PKD2L1-203ENST00000528248 NECAB1Q8N987 351 aa18.03■□□□□ 0.48
PKD2L1-203ENST00000528248 DDX54Q8TDD1 881 aaKnown RBP18.03■□□□□ 0.48
PKD2L1-203ENST00000528248 USP16Q9Y5T5 823 aa18.03■□□□□ 0.48
PKD2L1-203ENST00000528248 RPS6KB1P23443 525 aa18.03■□□□□ 0.48
PKD2L1-203ENST00000528248 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
PKD2L1-203ENST00000528248 COL18A1P39060 1754 aa18.03■□□□□ 0.48
PKD2L1-203ENST00000528248 PDCP20941 246 aa18.02■□□□□ 0.48
PKD2L1-203ENST00000528248 PTPN12Q05209 780 aaKnown RBP18.02■□□□□ 0.48
PKD2L1-203ENST00000528248 RABL6Q3YEC7 729 aaPredicted RBP18.02■□□□□ 0.48
PKD2L1-203ENST00000528248 LARP1BQ659C4 914 aaKnown RBP18.02■□□□□ 0.48
PKD2L1-203ENST00000528248 VPS37CA5D8V6 355 aaPredicted RBP18.02■□□□□ 0.47
PKD2L1-203ENST00000528248 TNNI3KQ59H18 835 aa18.02■□□□□ 0.47
PKD2L1-203ENST00000528248 FPGT-TNNI3KV9GXZ4 949 aa18.02■□□□□ 0.47
PKD2L1-203ENST00000528248 TAF5LO75529 589 aa18.01■□□□□ 0.47
PKD2L1-203ENST00000528248 CSB-PGBD3P0DP91 1061 aa18.01■□□□□ 0.47
PKD2L1-203ENST00000528248 USPL1Q5W0Q7 1092 aa18.01■□□□□ 0.47
PKD2L1-203ENST00000528248 RFX7Q2KHR2 1363 aa18.01■□□□□ 0.47
PKD2L1-203ENST00000528248 PTMAP06454 111 aaKnown RBP18.01■□□□□ 0.47
PKD2L1-203ENST00000528248 AFDNP55196 1824 aaKnown RBP18.01■□□□□ 0.47
PKD2L1-203ENST00000528248 ZNF589Q86UQ0 364 aaPredicted RBP18.01■□□□□ 0.47
PKD2L1-203ENST00000528248 DBNLQ9UJU6 430 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms